RNA–Protein interactions for RNA: ENST00000392345.6

CCDC57-204, Transcript of coiled-coil domain containing 57, humanhuman

APPRIS ALT2 TSL 3

Gene CCDC57, Length 678 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-204ENST00000392345 NISCHQ9Y2I1 1504 aa34.36■■■■□ 3.09
CCDC57-204ENST00000392345 CCDC180Q9P1Z9 1646 aa30.59■■■□□ 2.49
CCDC57-204ENST00000392345 ABCC9O60706 1549 aa30.27■■■□□ 2.44
CCDC57-204ENST00000392345 RB1CC1Q8TDY2 1594 aa28.92■■■□□ 2.22
CCDC57-204ENST00000392345 NACADO15069 1562 aa28.82■■■□□ 2.2
CCDC57-204ENST00000392345 DCAF8L2P0C7V8 631 aa28.78■■■□□ 2.2
CCDC57-204ENST00000392345 ZCCHC6Q5VYS8 1495 aaKnown RBP28.6■■■□□ 2.17
CCDC57-204ENST00000392345 MYO15BQ96JP2 1530 aa28.55■■■□□ 2.16
CCDC57-204ENST00000392345 DCAF1Q9Y4B6 1507 aa28.37■■■□□ 2.13
CCDC57-204ENST00000392345 UNC13AQ9UPW8 1703 aa28.29■■■□□ 2.12
CCDC57-204ENST00000392345 PABPN1Q86U42 306 aaKnown RBP eCLIP28.25■■■□□ 2.11
CCDC57-204ENST00000392345 BICRAQ9NZM4 1560 aa28.14■■■□□ 2.1
CCDC57-204ENST00000392345 DNAJC5BQ9UF47 199 aa28.03■■■□□ 2.08
CCDC57-204ENST00000392345 SCRIBQ14160 1630 aa28■■■□□ 2.07
CCDC57-204ENST00000392345 SHROOM4Q9ULL8 1493 aa27.71■■■□□ 2.03
CCDC57-204ENST00000392345 EIF4G1Q04637 1599 aaKnown RBP27.39■■□□□ 1.97
CCDC57-204ENST00000392345 CC2D2AQ9P2K1 1620 aa27.34■■□□□ 1.97
CCDC57-204ENST00000392345 CECR2Q9BXF3 1484 aa27.19■■□□□ 1.94
CCDC57-204ENST00000392345 SMARCA4P51532 1647 aa26.72■■□□□ 1.87
CCDC57-204ENST00000392345 ATAD2BQ9ULI0 1458 aa26.64■■□□□ 1.86
CCDC57-204ENST00000392345 NCAPD3P42695 1498 aa26.62■■□□□ 1.85
CCDC57-204ENST00000392345 BAZ1AQ9NRL2 1556 aaPredicted RBP26.62■■□□□ 1.85
CCDC57-204ENST00000392345 SMARCA2P51531 1590 aa26.54■■□□□ 1.84
CCDC57-204ENST00000392345 MROH2BQ7Z745 1585 aa26.53■■□□□ 1.84
CCDC57-204ENST00000392345 HMGXB3Q12766 1538 aa26.48■■□□□ 1.83
CCDC57-204ENST00000392345 PEG3Q9GZU2 1588 aa26.43■■□□□ 1.82
CCDC57-204ENST00000392345 BAZ1BQ9UIG0 1483 aaKnown RBP26.39■■□□□ 1.82
CCDC57-204ENST00000392345 WIZO95785 1651 aa26.2■■□□□ 1.78
CCDC57-204ENST00000392345 NESP48681 1621 aa26.14■■□□□ 1.78
CCDC57-204ENST00000392345 RSF1Q96T23 1441 aaPredicted RBP26.12■■□□□ 1.77
CCDC57-204ENST00000392345 ERCC6Q03468 1493 aa26.05■■□□□ 1.76
CCDC57-204ENST00000392345 LAMC3Q9Y6N6 1575 aa25.94■■□□□ 1.74
CCDC57-204ENST00000392345 TOP2AP11388 1531 aaKnown RBP25.89■■□□□ 1.74
CCDC57-204ENST00000392345 CUX2O14529 1486 aa25.85■■□□□ 1.73
CCDC57-204ENST00000392345 CADPSQ9ULU8 1353 aa25.84■■□□□ 1.73
CCDC57-204ENST00000392345 THOC2Q8NI27 1593 aaKnown RBP25.78■■□□□ 1.72
CCDC57-204ENST00000392345 KIF21AQ7Z4S6 1674 aa25.77■■□□□ 1.72
CCDC57-204ENST00000392345 PDS5BQ9NTI5 1447 aa25.77■■□□□ 1.72
CCDC57-204ENST00000392345 CFTRP13569 1480 aa25.66■■□□□ 1.7
CCDC57-204ENST00000392345 CCDC88BA6NC98 1476 aa25.6■■□□□ 1.69
CCDC57-204ENST00000392345 FANCD2Q9BXW9 1451 aa25.57■■□□□ 1.68
CCDC57-204ENST00000392345 MRC2Q9UBG0 1479 aa25.57■■□□□ 1.68
CCDC57-204ENST00000392345 CEP164Q9UPV0 1460 aa25.55■■□□□ 1.68
CCDC57-204ENST00000392345 WDR62O43379 1518 aa25.5■■□□□ 1.67
CCDC57-204ENST00000392345 URB2Q14146 1524 aaKnown RBP25.37■■□□□ 1.65
CCDC57-204ENST00000392345 PRDM2Q13029 1718 aa25.37■■□□□ 1.65
CCDC57-204ENST00000392345 DNAJC5Q9H3Z4 198 aa25.32■■□□□ 1.64
CCDC57-204ENST00000392345 SUPT5HO00267 1087 aaKnown RBP25.26■■□□□ 1.63
CCDC57-204ENST00000392345 TOPBP1Q92547 1522 aa25.14■■□□□ 1.62
CCDC57-204ENST00000392345 DNMBPQ6XZF7 1577 aa25.07■■□□□ 1.6
CCDC57-204ENST00000392345 ABCC8Q09428 1581 aa25.01■■□□□ 1.59
CCDC57-204ENST00000392345 IFT140Q96RY7 1462 aa25.01■■□□□ 1.59
CCDC57-204ENST00000392345 ZNF608Q9ULD9 1512 aaPredicted RBP25■■□□□ 1.59
CCDC57-204ENST00000392345 POLA1P09884 1462 aaPredicted RBP24.93■■□□□ 1.58
CCDC57-204ENST00000392345 CUX1P39880 1505 aa24.91■■□□□ 1.58
CCDC57-204ENST00000392345 TARBP1Q13395 1621 aaKnown RBP24.89■■□□□ 1.57
CCDC57-204ENST00000392345 EIF4G3O43432 1585 aaKnown RBP24.85■■□□□ 1.57
CCDC57-204ENST00000392345 RAD54L2Q9Y4B4 1467 aa24.84■■□□□ 1.57
CCDC57-204ENST00000392345 FGD5Q6ZNL6 1462 aa24.83■■□□□ 1.56
CCDC57-204ENST00000392345 AQRO60306 1485 aaKnown RBP eCLIP24.8■■□□□ 1.56
CCDC57-204ENST00000392345 SOGA1O94964 1423 aa24.78■■□□□ 1.56
CCDC57-204ENST00000392345 TDRD9Q8NDG6 1382 aaKnown RBP24.7■■□□□ 1.55
CCDC57-204ENST00000392345 OSCARQ8IYS5 282 aa24.69■■□□□ 1.54
CCDC57-204ENST00000392345 WDR97A6NE52 1622 aa24.63■■□□□ 1.53
CCDC57-204ENST00000392345 SYNJ1O43426 1573 aa24.61■■□□□ 1.53
CCDC57-204ENST00000392345 WRNQ14191 1432 aaPredicted RBP eCLIP24.6■■□□□ 1.53
CCDC57-204ENST00000392345 SNAPC4Q5SXM2 1469 aa24.58■■□□□ 1.52
CCDC57-204ENST00000392345 TOP2BQ02880 1626 aa24.56■■□□□ 1.52
CCDC57-204ENST00000392345 BIVM-ERCC5R4GMW8 1640 aa24.56■■□□□ 1.52
CCDC57-204ENST00000392345 CHD1O14646 1710 aa24.55■■□□□ 1.52
CCDC57-204ENST00000392345 ABCA10Q8WWZ4 1543 aa24.55■■□□□ 1.52
CCDC57-204ENST00000392345 GRIN2BQ13224 1484 aa24.51■■□□□ 1.51
CCDC57-204ENST00000392345 FBLN2P98095 1184 aa24.5■■□□□ 1.51
CCDC57-204ENST00000392345 GAPVD1Q14C86 1478 aa24.5■■□□□ 1.51
CCDC57-204ENST00000392345 ABCA5Q8WWZ7 1642 aa24.5■■□□□ 1.51
CCDC57-204ENST00000392345 MAGI1Q96QZ7 1491 aaPredicted RBP24.46■■□□□ 1.51
CCDC57-204ENST00000392345 TRIM41Q8WV44 630 aa24.45■■□□□ 1.5
CCDC57-204ENST00000392345 PBRM1Q86U86 1689 aa24.45■■□□□ 1.5
CCDC57-204ENST00000392345 RIMBP3CA6NJZ7 1639 aa24.4■■□□□ 1.5
CCDC57-204ENST00000392345 RIMBP3BA6NNM3 1639 aa24.4■■□□□ 1.5
CCDC57-204ENST00000392345 RIMBP3Q9UFD9 1639 aa24.4■■□□□ 1.5
CCDC57-204ENST00000392345 SYNJ2O15056 1496 aa24.38■■□□□ 1.49
CCDC57-204ENST00000392345 ARHGEF11O15085 1522 aa24.38■■□□□ 1.49
CCDC57-204ENST00000392345 CHMP7Q8WUX9 453 aaPredicted RBP24.36■■□□□ 1.49
CCDC57-204ENST00000392345 CLASP1Q7Z460 1538 aa24.32■■□□□ 1.48
CCDC57-204ENST00000392345 ADAMTS12P58397 1594 aa24.29■■□□□ 1.48
CCDC57-204ENST00000392345 ERICH3Q5RHP9 1530 aa24.23■■□□□ 1.47
CCDC57-204ENST00000392345 GRIN2AQ12879 1464 aa24.22■■□□□ 1.47
CCDC57-204ENST00000392345 ARAP1Q96P48 1450 aa24.2■■□□□ 1.47
CCDC57-204ENST00000392345 FHAD1B1AJZ9 1412 aa24.19■■□□□ 1.46
CCDC57-204ENST00000392345 CEP170Q5SW79 1584 aa24.14■■□□□ 1.45
CCDC57-204ENST00000392345 CYB5RLQ6IPT4 315 aa24.14■■□□□ 1.45
CCDC57-204ENST00000392345 NUP160Q12769 1436 aa24.13■■□□□ 1.45
CCDC57-204ENST00000392345 KIF27Q86VH2 1401 aa24.08■■□□□ 1.44
CCDC57-204ENST00000392345 IGF1RP08069 1367 aa24.04■■□□□ 1.44
CCDC57-204ENST00000392345 ERCC6L2Q5T890 1561 aa24.02■■□□□ 1.44
CCDC57-204ENST00000392345 SHROOM2Q13796 1616 aa23.95■■□□□ 1.43
CCDC57-204ENST00000392345 RUSC2Q8N2Y8 1516 aa23.94■■□□□ 1.42
CCDC57-204ENST00000392345 CUL7Q14999 1698 aa23.94■■□□□ 1.42
CCDC57-204ENST00000392345 CARMIL1Q5VZK9 1371 aa23.88■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms