RNA–Protein interactions for RNA: ENST00000497209.5

SLCO4A1-208, Transcript of solute carrier organic anion transporter family member 4A1, humanhuman

TSL 1 (best)

Gene SLCO4A1, Length 3,092 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLCO4A1-208ENST00000497209 NISCHQ9Y2I1 1504 aa28.81■■■□□ 2.2
SLCO4A1-208ENST00000497209 SHROOM4Q9ULL8 1493 aa25.69■■□□□ 1.7
SLCO4A1-208ENST00000497209 HRCP23327 699 aa25.53■■□□□ 1.68
SLCO4A1-208ENST00000497209 SUPT5HO00267 1087 aaKnown RBP25.44■■□□□ 1.66
SLCO4A1-208ENST00000497209 PPARGC1BQ86YN6 1023 aaKnown RBP25.17■■□□□ 1.62
SLCO4A1-208ENST00000497209 PCGF6Q9BYE7 350 aa25.09■■□□□ 1.61
SLCO4A1-208ENST00000497209 MYO15BQ96JP2 1530 aa24.9■■□□□ 1.58
SLCO4A1-208ENST00000497209 DCAF8L2P0C7V8 631 aa24.74■■□□□ 1.55
SLCO4A1-208ENST00000497209 CHIC1Q5VXU3 224 aa24.7■■□□□ 1.54
SLCO4A1-208ENST00000497209 PELP1Q8IZL8 1130 aaKnown RBP24.55■■□□□ 1.52
SLCO4A1-208ENST00000497209 ZCCHC6Q5VYS8 1495 aaKnown RBP24.38■■□□□ 1.49
SLCO4A1-208ENST00000497209 LOC105371045A0A1W2PR82 267 aa24.26■■□□□ 1.47
SLCO4A1-208ENST00000497209 SCAF1Q9H7N4 1312 aaKnown RBP24.26■■□□□ 1.47
SLCO4A1-208ENST00000497209 DCAF1Q9Y4B6 1507 aa24.22■■□□□ 1.47
SLCO4A1-208ENST00000497209 TRIM26Q12899 539 aaPredicted RBP24.13■■□□□ 1.45
SLCO4A1-208ENST00000497209 CCDC180Q9P1Z9 1646 aa23.92■■□□□ 1.42
SLCO4A1-208ENST00000497209 ZEB1P37275 1124 aaPredicted RBP23.86■■□□□ 1.41
SLCO4A1-208ENST00000497209 EHMT2Q96KQ7 1210 aa23.7■■□□□ 1.38
SLCO4A1-208ENST00000497209 FAM9AQ8IZU1 332 aaPredicted RBP23.62■■□□□ 1.37
SLCO4A1-208ENST00000497209 NEUROD1Q13562 356 aa23.59■■□□□ 1.37
SLCO4A1-208ENST00000497209 ACIN1Q9UKV3 1341 aaKnown RBP23.58■■□□□ 1.36
SLCO4A1-208ENST00000497209 MYT1Q01538 1121 aa23.53■■□□□ 1.36
SLCO4A1-208ENST00000497209 GTF3C3Q9Y5Q9 886 aa23.46■■□□□ 1.35
SLCO4A1-208ENST00000497209 TRIM41Q8WV44 630 aa23.44■■□□□ 1.34
SLCO4A1-208ENST00000497209 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.24■■□□□ 1.31
SLCO4A1-208ENST00000497209 CENPBP07199 599 aaPredicted RBP23.21■■□□□ 1.31
SLCO4A1-208ENST00000497209 DIEXFQ68CQ4 756 aaKnown RBP23.17■■□□□ 1.3
SLCO4A1-208ENST00000497209 RSF1Q96T23 1441 aaPredicted RBP23.13■■□□□ 1.29
SLCO4A1-208ENST00000497209 CCER1Q8TC90 406 aaPredicted RBP23.13■■□□□ 1.29
SLCO4A1-208ENST00000497209 SCRIBQ14160 1630 aa23.06■■□□□ 1.28
SLCO4A1-208ENST00000497209 ABCC9O60706 1549 aa23.05■■□□□ 1.28
SLCO4A1-208ENST00000497209 TTBK1Q5TCY1 1321 aaPredicted RBP22.99■■□□□ 1.27
SLCO4A1-208ENST00000497209 RB1CC1Q8TDY2 1594 aa22.96■■□□□ 1.27
SLCO4A1-208ENST00000497209 YTHDC1Q96MU7 727 aaKnown RBP22.91■■□□□ 1.26
SLCO4A1-208ENST00000497209 CECR2Q9BXF3 1484 aa22.72■■□□□ 1.23
SLCO4A1-208ENST00000497209 ZNF316A6NFI3 1004 aaPredicted RBP22.66■■□□□ 1.22
SLCO4A1-208ENST00000497209 MIER1Q8N108 512 aa22.62■■□□□ 1.21
SLCO4A1-208ENST00000497209 MROH2BQ7Z745 1585 aa22.58■■□□□ 1.21
SLCO4A1-208ENST00000497209 WIZO95785 1651 aa22.45■■□□□ 1.18
SLCO4A1-208ENST00000497209 UBTFP17480 764 aaKnown RBP22.38■■□□□ 1.17
SLCO4A1-208ENST00000497209 ABCC8Q09428 1581 aa22.28■■□□□ 1.16
SLCO4A1-208ENST00000497209 SUPT16HQ9Y5B9 1047 aaKnown RBP22.27■■□□□ 1.16
SLCO4A1-208ENST00000497209 BCL11AQ9H165 835 aa22.27■■□□□ 1.16
SLCO4A1-208ENST00000497209 CCDC88BA6NC98 1476 aa22.27■■□□□ 1.16
SLCO4A1-208ENST00000497209 CEP162Q5TB80 1403 aa22.26■■□□□ 1.15
SLCO4A1-208ENST00000497209 HNRNPUL2Q1KMD3 747 aaKnown RBP22.25■■□□□ 1.15
SLCO4A1-208ENST00000497209 WRNQ14191 1432 aaPredicted RBP eCLIP22.23■■□□□ 1.15
SLCO4A1-208ENST00000497209 SOGA1O94964 1423 aa22.23■■□□□ 1.15
SLCO4A1-208ENST00000497209 ANP32EQ9BTT0 268 aa22.23■■□□□ 1.15
SLCO4A1-208ENST00000497209 TSHZ2Q9NRE2 1034 aa22.2■■□□□ 1.14
SLCO4A1-208ENST00000497209 RANGAP1P46060 587 aaPredicted RBP22.19■■□□□ 1.14
SLCO4A1-208ENST00000497209 NACADO15069 1562 aa22.17■■□□□ 1.14
SLCO4A1-208ENST00000497209 CSRNP3Q8WYN3 585 aa22.15■■□□□ 1.14
SLCO4A1-208ENST00000497209 BAZ1AQ9NRL2 1556 aaPredicted RBP22.12■■□□□ 1.13
SLCO4A1-208ENST00000497209 RUSC2Q8N2Y8 1516 aa22.11■■□□□ 1.13
SLCO4A1-208ENST00000497209 TNIKQ9UKE5 1360 aa22.06■■□□□ 1.12
SLCO4A1-208ENST00000497209 EIF4G1Q04637 1599 aaKnown RBP22.02■■□□□ 1.12
SLCO4A1-208ENST00000497209 CLSPNQ9HAW4 1339 aa22■■□□□ 1.11
SLCO4A1-208ENST00000497209 TOP2AP11388 1531 aaKnown RBP21.92■■□□□ 1.1
SLCO4A1-208ENST00000497209 APLP2Q06481 763 aa21.92■■□□□ 1.1
SLCO4A1-208ENST00000497209 PABPN1Q86U42 306 aaKnown RBP eCLIP21.92■■□□□ 1.1
SLCO4A1-208ENST00000497209 BCANQ96GW7 911 aa21.9■■□□□ 1.1
SLCO4A1-208ENST00000497209 SMARCA2P51531 1590 aa21.88■■□□□ 1.09
SLCO4A1-208ENST00000497209 GOLGA3Q08378 1498 aa21.85■■□□□ 1.09
SLCO4A1-208ENST00000497209 KCNH8Q96L42 1107 aa21.8■■□□□ 1.08
SLCO4A1-208ENST00000497209 SMARCA4P51532 1647 aa21.8■■□□□ 1.08
SLCO4A1-208ENST00000497209 EEA1Q15075 1411 aa21.79■■□□□ 1.08
SLCO4A1-208ENST00000497209 CLIP1P30622 1438 aa21.77■■□□□ 1.08
SLCO4A1-208ENST00000497209 FKBP8Q14318 412 aa21.7■■□□□ 1.06
SLCO4A1-208ENST00000497209 RBM19Q9Y4C8 960 aaKnown RBP21.68■■□□□ 1.06
SLCO4A1-208ENST00000497209 CEP164Q9UPV0 1460 aa21.64■■□□□ 1.06
SLCO4A1-208ENST00000497209 DHX57Q6P158 1386 aaKnown RBP21.63■■□□□ 1.05
SLCO4A1-208ENST00000497209 ITGAEP38570 1179 aa21.61■■□□□ 1.05
SLCO4A1-208ENST00000497209 VPS8Q8N3P4 1428 aa21.61■■□□□ 1.05
SLCO4A1-208ENST00000497209 RAPGEF2Q9Y4G8 1499 aa21.58■■□□□ 1.05
SLCO4A1-208ENST00000497209 SYNJ1O43426 1573 aa21.54■■□□□ 1.04
SLCO4A1-208ENST00000497209 MSH5O43196 834 aa21.52■■□□□ 1.04
SLCO4A1-208ENST00000497209 KANK4Q5T7N3 995 aaPredicted RBP21.52■■□□□ 1.03
SLCO4A1-208ENST00000497209 KIF21BO75037 1637 aa21.43■■□□□ 1.02
SLCO4A1-208ENST00000497209 NEFLP07196 543 aa21.42■■□□□ 1.02
SLCO4A1-208ENST00000497209 DDX10Q13206 875 aaKnown RBP21.4■■□□□ 1.02
SLCO4A1-208ENST00000497209 TRIM52Q96A61 297 aa21.4■■□□□ 1.02
SLCO4A1-208ENST00000497209 UNC13AQ9UPW8 1703 aa21.39■■□□□ 1.01
SLCO4A1-208ENST00000497209 PRKCSHP14314 528 aaPredicted RBP21.33■■□□□ 1
SLCO4A1-208ENST00000497209 BAZ1BQ9UIG0 1483 aaKnown RBP21.32■■□□□ 1
SLCO4A1-208ENST00000497209 ATAD2BQ9ULI0 1458 aa21.26■□□□□ 0.99
SLCO4A1-208ENST00000497209 ERICH6Q7L0X2 663 aa21.25■□□□□ 0.99
SLCO4A1-208ENST00000497209 HIRIP3Q9BW71 556 aaPredicted RBP21.24■□□□□ 0.99
SLCO4A1-208ENST00000497209 ARAP1Q96P48 1450 aa21.23■□□□□ 0.99
SLCO4A1-208ENST00000497209 BICRAQ9NZM4 1560 aa21.22■□□□□ 0.99
SLCO4A1-208ENST00000497209 ATP1B4Q9UN42 357 aaPredicted RBP21.2■□□□□ 0.98
SLCO4A1-208ENST00000497209 FANCIQ9NVI1 1328 aa21.19■□□□□ 0.98
SLCO4A1-208ENST00000497209 IRX6P78412 446 aaPredicted RBP21.19■□□□□ 0.98
SLCO4A1-208ENST00000497209 CCNB3Q8WWL7 1395 aa21.17■□□□□ 0.98
SLCO4A1-208ENST00000497209 PPP1R15AO75807 674 aaPredicted RBP21.17■□□□□ 0.98
SLCO4A1-208ENST00000497209 SIN3AQ96ST3 1273 aa21.17■□□□□ 0.98
SLCO4A1-208ENST00000497209 FAM50AQ14320 339 aaKnown RBP21.15■□□□□ 0.98
SLCO4A1-208ENST00000497209 CDK11AQ9UQ88 783 aaPredicted RBP21.13■□□□□ 0.97
SLCO4A1-208ENST00000497209 RRBP1Q9P2E9 1410 aaKnown RBP21.12■□□□□ 0.97
SLCO4A1-208ENST00000497209 DEKP35659 375 aaKnown RBP21.11■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms