RNA–Protein interactions for RNA: ENST00000615296.4

PCSK6-216, Transcript of proprotein convertase subtilisin/kexin type 6, humanhuman

TSL 5 BASIC

Gene PCSK6, Length 2,921 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCSK6-216ENST00000615296 NISCHQ9Y2I1 1504 aa44.79■■■■■ 4.76
PCSK6-216ENST00000615296 HRCP23327 699 aa40.75■■■■■ 4.11
PCSK6-216ENST00000615296 SHROOM4Q9ULL8 1493 aa40.15■■■■■ 4.02
PCSK6-216ENST00000615296 SUPT5HO00267 1087 aaKnown RBP40.1■■■■■ 4.01
PCSK6-216ENST00000615296 PPARGC1BQ86YN6 1023 aaKnown RBP40.06■■■■■ 4
PCSK6-216ENST00000615296 PCGF6Q9BYE7 350 aa40■■■■□ 3.99
PCSK6-216ENST00000615296 MYO15BQ96JP2 1530 aa39.61■■■■□ 3.93
PCSK6-216ENST00000615296 CHIC1Q5VXU3 224 aa39.37■■■■□ 3.89
PCSK6-216ENST00000615296 PELP1Q8IZL8 1130 aaKnown RBP39.37■■■■□ 3.89
PCSK6-216ENST00000615296 SCAF1Q9H7N4 1312 aaKnown RBP38.68■■■■□ 3.78
PCSK6-216ENST00000615296 DCAF1Q9Y4B6 1507 aa38.66■■■■□ 3.78
PCSK6-216ENST00000615296 LOC105371045A0A1W2PR82 267 aa38.62■■■■□ 3.77
PCSK6-216ENST00000615296 TRIM26Q12899 539 aaPredicted RBP38.53■■■■□ 3.76
PCSK6-216ENST00000615296 ZEB1P37275 1124 aaPredicted RBP38.19■■■■□ 3.7
PCSK6-216ENST00000615296 CCDC180Q9P1Z9 1646 aa38.15■■■■□ 3.7
PCSK6-216ENST00000615296 ZCCHC6Q5VYS8 1495 aaKnown RBP38.1■■■■□ 3.69
PCSK6-216ENST00000615296 MYT1Q01538 1121 aa37.81■■■■□ 3.64
PCSK6-216ENST00000615296 DCAF8L2P0C7V8 631 aa37.75■■■■□ 3.63
PCSK6-216ENST00000615296 ACIN1Q9UKV3 1341 aaKnown RBP37.65■■■■□ 3.62
PCSK6-216ENST00000615296 NEUROD1Q13562 356 aa37.61■■■■□ 3.61
PCSK6-216ENST00000615296 GTF3C3Q9Y5Q9 886 aa37.43■■■■□ 3.58
PCSK6-216ENST00000615296 CENPBP07199 599 aaPredicted RBP37.15■■■■□ 3.54
PCSK6-216ENST00000615296 FAM9AQ8IZU1 332 aaPredicted RBP37.13■■■■□ 3.54
PCSK6-216ENST00000615296 EHMT2Q96KQ7 1210 aa37.1■■■■□ 3.53
PCSK6-216ENST00000615296 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP37.03■■■■□ 3.52
PCSK6-216ENST00000615296 DIEXFQ68CQ4 756 aaKnown RBP36.99■■■■□ 3.51
PCSK6-216ENST00000615296 TRIM41Q8WV44 630 aa36.98■■■■□ 3.51
PCSK6-216ENST00000615296 CCER1Q8TC90 406 aaPredicted RBP36.93■■■■□ 3.5
PCSK6-216ENST00000615296 YTHDC1Q96MU7 727 aaKnown RBP36.54■■■■□ 3.44
PCSK6-216ENST00000615296 TTBK1Q5TCY1 1321 aaPredicted RBP36.23■■■■□ 3.39
PCSK6-216ENST00000615296 RSF1Q96T23 1441 aaPredicted RBP36.22■■■■□ 3.39
PCSK6-216ENST00000615296 ABCC9O60706 1549 aa36.2■■■■□ 3.39
PCSK6-216ENST00000615296 ZNF316A6NFI3 1004 aaPredicted RBP36.2■■■■□ 3.39
PCSK6-216ENST00000615296 RB1CC1Q8TDY2 1594 aa36.07■■■■□ 3.37
PCSK6-216ENST00000615296 MIER1Q8N108 512 aa36.06■■■■□ 3.36
PCSK6-216ENST00000615296 BCL11AQ9H165 835 aa35.58■■■■□ 3.29
PCSK6-216ENST00000615296 SUPT16HQ9Y5B9 1047 aaKnown RBP35.54■■■■□ 3.28
PCSK6-216ENST00000615296 ANP32EQ9BTT0 268 aa35.53■■■■□ 3.28
PCSK6-216ENST00000615296 SCRIBQ14160 1630 aa35.53■■■■□ 3.28
PCSK6-216ENST00000615296 WRNQ14191 1432 aaPredicted RBP eCLIP35.48■■■■□ 3.27
PCSK6-216ENST00000615296 TSHZ2Q9NRE2 1034 aa35.43■■■■□ 3.26
PCSK6-216ENST00000615296 CEP162Q5TB80 1403 aa35.37■■■■□ 3.25
PCSK6-216ENST00000615296 HNRNPUL2Q1KMD3 747 aaKnown RBP35.36■■■■□ 3.25
PCSK6-216ENST00000615296 CLSPNQ9HAW4 1339 aa35.25■■■■□ 3.23
PCSK6-216ENST00000615296 CSRNP3Q8WYN3 585 aa35.23■■■■□ 3.23
PCSK6-216ENST00000615296 CECR2Q9BXF3 1484 aa35.18■■■■□ 3.22
PCSK6-216ENST00000615296 UBTFP17480 764 aaKnown RBP35.12■■■■□ 3.21
PCSK6-216ENST00000615296 MROH2BQ7Z745 1585 aa35.09■■■■□ 3.21
PCSK6-216ENST00000615296 TNIKQ9UKE5 1360 aa35.07■■■■□ 3.2
PCSK6-216ENST00000615296 CCDC88BA6NC98 1476 aa35.01■■■■□ 3.19
PCSK6-216ENST00000615296 WIZO95785 1651 aa34.96■■■■□ 3.19
PCSK6-216ENST00000615296 SOGA1O94964 1423 aa34.95■■■■□ 3.18
PCSK6-216ENST00000615296 BCANQ96GW7 911 aa34.92■■■■□ 3.18
PCSK6-216ENST00000615296 ABCC8Q09428 1581 aa34.9■■■■□ 3.18
PCSK6-216ENST00000615296 EIF4G1Q04637 1599 aaKnown RBP34.81■■■■□ 3.16
PCSK6-216ENST00000615296 RUSC2Q8N2Y8 1516 aa34.72■■■■□ 3.15
PCSK6-216ENST00000615296 KCNH8Q96L42 1107 aa34.68■■■■□ 3.14
PCSK6-216ENST00000615296 FKBP8Q14318 412 aa34.65■■■■□ 3.14
PCSK6-216ENST00000615296 RBM19Q9Y4C8 960 aaKnown RBP34.6■■■■□ 3.13
PCSK6-216ENST00000615296 BAZ1AQ9NRL2 1556 aaPredicted RBP34.59■■■■□ 3.13
PCSK6-216ENST00000615296 APLP2Q06481 763 aa34.57■■■■□ 3.12
PCSK6-216ENST00000615296 GOLGA3Q08378 1498 aa34.57■■■■□ 3.12
PCSK6-216ENST00000615296 EEA1Q15075 1411 aa34.52■■■■□ 3.12
PCSK6-216ENST00000615296 DHX57Q6P158 1386 aaKnown RBP34.49■■■■□ 3.11
PCSK6-216ENST00000615296 RANGAP1P46060 587 aaPredicted RBP34.44■■■■□ 3.1
PCSK6-216ENST00000615296 CLIP1P30622 1438 aa34.4■■■■□ 3.1
PCSK6-216ENST00000615296 ITGAEP38570 1179 aa34.39■■■■□ 3.1
PCSK6-216ENST00000615296 VPS8Q8N3P4 1428 aa34.33■■■■□ 3.09
PCSK6-216ENST00000615296 MSH5O43196 834 aa34.31■■■■□ 3.08
PCSK6-216ENST00000615296 NEFLP07196 543 aa34.3■■■■□ 3.08
PCSK6-216ENST00000615296 NACADO15069 1562 aa34.28■■■■□ 3.08
PCSK6-216ENST00000615296 CEP164Q9UPV0 1460 aa34.18■■■■□ 3.06
PCSK6-216ENST00000615296 TOP2AP11388 1531 aaKnown RBP34.17■■■■□ 3.06
PCSK6-216ENST00000615296 SMARCA2P51531 1590 aa34.14■■■■□ 3.06
PCSK6-216ENST00000615296 DDX10Q13206 875 aaKnown RBP34.12■■■■□ 3.05
PCSK6-216ENST00000615296 TRIM52Q96A61 297 aa34.11■■■■□ 3.05
PCSK6-216ENST00000615296 PRKCSHP14314 528 aaPredicted RBP34.07■■■■□ 3.05
PCSK6-216ENST00000615296 ERICH6Q7L0X2 663 aa34.03■■■■□ 3.04
PCSK6-216ENST00000615296 KANK4Q5T7N3 995 aaPredicted RBP33.97■■■■□ 3.03
PCSK6-216ENST00000615296 KIF21BO75037 1637 aa33.95■■■■□ 3.03
PCSK6-216ENST00000615296 RAPGEF2Q9Y4G8 1499 aa33.93■■■■□ 3.02
PCSK6-216ENST00000615296 FANCIQ9NVI1 1328 aa33.89■■■■□ 3.02
PCSK6-216ENST00000615296 HIRIP3Q9BW71 556 aaPredicted RBP33.81■■■■□ 3
PCSK6-216ENST00000615296 BAZ1BQ9UIG0 1483 aaKnown RBP33.8■■■■□ 3
PCSK6-216ENST00000615296 CDK11AQ9UQ88 783 aaPredicted RBP33.8■■■■□ 3
PCSK6-216ENST00000615296 IRX6P78412 446 aaPredicted RBP33.77■■■■□ 3
PCSK6-216ENST00000615296 PPP1R15AO75807 674 aaPredicted RBP33.76■■■■□ 3
PCSK6-216ENST00000615296 SMARCA4P51532 1647 aa33.75■■■□□ 2.99
PCSK6-216ENST00000615296 DEKP35659 375 aaKnown RBP33.73■■■□□ 2.99
PCSK6-216ENST00000615296 ANP32CO43423 234 aa33.72■■■□□ 2.99
PCSK6-216ENST00000615296 SYNJ1O43426 1573 aa33.71■■■□□ 2.99
PCSK6-216ENST00000615296 RRBP1Q9P2E9 1410 aaKnown RBP33.69■■■□□ 2.98
PCSK6-216ENST00000615296 CCER2I3L3R5 266 aa33.68■■■□□ 2.98
PCSK6-216ENST00000615296 SIN3AQ96ST3 1273 aa33.67■■■□□ 2.98
PCSK6-216ENST00000615296 CCNB3Q8WWL7 1395 aa33.64■■■□□ 2.98
PCSK6-216ENST00000615296 RAB3GAP2Q9H2M9 1393 aa33.63■■■□□ 2.97
PCSK6-216ENST00000615296 CUX2O14529 1486 aa33.63■■■□□ 2.97
PCSK6-216ENST00000615296 WDR97A6NE52 1622 aa33.61■■■□□ 2.97
PCSK6-216ENST00000615296 MAPKBP1O60336 1514 aa33.59■■■□□ 2.97
PCSK6-216ENST00000615296 MYT1LQ9UL68 1186 aa33.58■■■□□ 2.97
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms