RNA–Protein interactions for RNA: ENST00000392346.6

CCDC57-205, Transcript of coiled-coil domain containing 57, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CCDC57, Length 2,964 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-205ENST00000392346 NISCHQ9Y2I1 1504 aa23.42■■□□□ 1.34
CCDC57-205ENST00000392346 CCDC180Q9P1Z9 1646 aa20.89■□□□□ 0.93
CCDC57-205ENST00000392346 ABCC9O60706 1549 aa20.75■□□□□ 0.91
CCDC57-205ENST00000392346 SHROOM4Q9ULL8 1493 aa20.45■□□□□ 0.86
CCDC57-205ENST00000392346 SUPT5HO00267 1087 aaKnown RBP20.08■□□□□ 0.81
CCDC57-205ENST00000392346 SLC24A1O60721 1099 aa19.99■□□□□ 0.79
CCDC57-205ENST00000392346 DCAF8L2P0C7V8 631 aa19.91■□□□□ 0.78
CCDC57-205ENST00000392346 RB1CC1Q8TDY2 1594 aa19.84■□□□□ 0.77
CCDC57-205ENST00000392346 NACADO15069 1562 aa19.74■□□□□ 0.75
CCDC57-205ENST00000392346 MYO15BQ96JP2 1530 aa19.5■□□□□ 0.71
CCDC57-205ENST00000392346 ZCCHC6Q5VYS8 1495 aaKnown RBP19.42■□□□□ 0.7
CCDC57-205ENST00000392346 PABPN1Q86U42 306 aaKnown RBP eCLIP19.39■□□□□ 0.7
CCDC57-205ENST00000392346 CHIC1Q5VXU3 224 aa19.34■□□□□ 0.69
CCDC57-205ENST00000392346 DCAF1Q9Y4B6 1507 aa19.33■□□□□ 0.68
CCDC57-205ENST00000392346 UNC13AQ9UPW8 1703 aa19.29■□□□□ 0.68
CCDC57-205ENST00000392346 PCGF6Q9BYE7 350 aa19.23■□□□□ 0.67
CCDC57-205ENST00000392346 DNAJC5BQ9UF47 199 aa19.21■□□□□ 0.67
CCDC57-205ENST00000392346 PPARGC1BQ86YN6 1023 aaKnown RBP19.15■□□□□ 0.66
CCDC57-205ENST00000392346 BICRAQ9NZM4 1560 aa19.14■□□□□ 0.66
CCDC57-205ENST00000392346 PRKCSHP14314 528 aaPredicted RBP19.12■□□□□ 0.65
CCDC57-205ENST00000392346 LOC105371045A0A1W2PR82 267 aa19.09■□□□□ 0.65
CCDC57-205ENST00000392346 HRCP23327 699 aa19.09■□□□□ 0.65
CCDC57-205ENST00000392346 SCRIBQ14160 1630 aa19.08■□□□□ 0.65
CCDC57-205ENST00000392346 EHMT2Q96KQ7 1210 aa18.84■□□□□ 0.61
CCDC57-205ENST00000392346 PELP1Q8IZL8 1130 aaKnown RBP18.79■□□□□ 0.6
CCDC57-205ENST00000392346 MYT1Q01538 1121 aa18.73■□□□□ 0.59
CCDC57-205ENST00000392346 EIF4G1Q04637 1599 aaKnown RBP18.72■□□□□ 0.59
CCDC57-205ENST00000392346 CC2D2AQ9P2K1 1620 aa18.71■□□□□ 0.59
CCDC57-205ENST00000392346 FAM9AQ8IZU1 332 aaPredicted RBP18.69■□□□□ 0.58
CCDC57-205ENST00000392346 CECR2Q9BXF3 1484 aa18.67■□□□□ 0.58
CCDC57-205ENST00000392346 TRIM26Q12899 539 aaPredicted RBP18.43■□□□□ 0.54
CCDC57-205ENST00000392346 APLP2Q06481 763 aa18.42■□□□□ 0.54
CCDC57-205ENST00000392346 TRIM41Q8WV44 630 aa18.42■□□□□ 0.54
CCDC57-205ENST00000392346 DAXXQ9UER7 740 aaPredicted RBP18.38■□□□□ 0.53
CCDC57-205ENST00000392346 RSF1Q96T23 1441 aaPredicted RBP18.36■□□□□ 0.53
CCDC57-205ENST00000392346 TTBK1Q5TCY1 1321 aaPredicted RBP18.32■□□□□ 0.52
CCDC57-205ENST00000392346 ERICH6Q7L0X2 663 aa18.22■□□□□ 0.51
CCDC57-205ENST00000392346 NCAPD3P42695 1498 aa18.21■□□□□ 0.51
CCDC57-205ENST00000392346 SMARCA4P51532 1647 aa18.21■□□□□ 0.5
CCDC57-205ENST00000392346 BAZ1AQ9NRL2 1556 aaPredicted RBP18.2■□□□□ 0.5
CCDC57-205ENST00000392346 ATAD2BQ9ULI0 1458 aa18.19■□□□□ 0.5
CCDC57-205ENST00000392346 SMARCA2P51531 1590 aa18.18■□□□□ 0.5
CCDC57-205ENST00000392346 PLPPR3Q6T4P5 718 aa18.09■□□□□ 0.49
CCDC57-205ENST00000392346 HMGXB3Q12766 1538 aa18.08■□□□□ 0.48
CCDC57-205ENST00000392346 BAZ1BQ9UIG0 1483 aaKnown RBP18.07■□□□□ 0.48
CCDC57-205ENST00000392346 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.04■□□□□ 0.48
CCDC57-205ENST00000392346 MROH2BQ7Z745 1585 aa18.03■□□□□ 0.48
CCDC57-205ENST00000392346 PEG3Q9GZU2 1588 aa17.99■□□□□ 0.47
CCDC57-205ENST00000392346 WIZO95785 1651 aa17.98■□□□□ 0.47
CCDC57-205ENST00000392346 ERCC6Q03468 1493 aa17.97■□□□□ 0.47
CCDC57-205ENST00000392346 SCAF1Q9H7N4 1312 aaKnown RBP17.94■□□□□ 0.46
CCDC57-205ENST00000392346 ZEB1P37275 1124 aaPredicted RBP17.88■□□□□ 0.45
CCDC57-205ENST00000392346 NESP48681 1621 aa17.85■□□□□ 0.45
CCDC57-205ENST00000392346 CCER1Q8TC90 406 aaPredicted RBP17.84■□□□□ 0.45
CCDC57-205ENST00000392346 ABCC8Q09428 1581 aa17.8■□□□□ 0.44
CCDC57-205ENST00000392346 LAMC3Q9Y6N6 1575 aa17.78■□□□□ 0.44
CCDC57-205ENST00000392346 CUX2O14529 1486 aa17.77■□□□□ 0.44
CCDC57-205ENST00000392346 PDS5BQ9NTI5 1447 aa17.74■□□□□ 0.43
CCDC57-205ENST00000392346 RTN4Q9NQC3 1192 aaKnown RBP17.73■□□□□ 0.43
CCDC57-205ENST00000392346 CADPSQ9ULU8 1353 aa17.72■□□□□ 0.43
CCDC57-205ENST00000392346 CCDC88BA6NC98 1476 aa17.71■□□□□ 0.43
CCDC57-205ENST00000392346 PLEKHG5O94827 1062 aa17.67■□□□□ 0.42
CCDC57-205ENST00000392346 NEUROD1Q13562 356 aa17.66■□□□□ 0.42
CCDC57-205ENST00000392346 SOGA1O94964 1423 aa17.65■□□□□ 0.42
CCDC57-205ENST00000392346 RANGAP1P46060 587 aaPredicted RBP17.63■□□□□ 0.41
CCDC57-205ENST00000392346 RUSC2Q8N2Y8 1516 aa17.63■□□□□ 0.41
CCDC57-205ENST00000392346 TOP2AP11388 1531 aaKnown RBP17.62■□□□□ 0.41
CCDC57-205ENST00000392346 EIF5BO60841 1220 aaKnown RBP17.62■□□□□ 0.41
CCDC57-205ENST00000392346 BCL11AQ9H165 835 aa17.61■□□□□ 0.41
CCDC57-205ENST00000392346 UBTFP17480 764 aaKnown RBP17.61■□□□□ 0.41
CCDC57-205ENST00000392346 KIF21AQ7Z4S6 1674 aa17.6■□□□□ 0.41
CCDC57-205ENST00000392346 THOC2Q8NI27 1593 aaKnown RBP17.57■□□□□ 0.4
CCDC57-205ENST00000392346 DNAJC5Q9H3Z4 198 aa17.56■□□□□ 0.4
CCDC57-205ENST00000392346 DIEXFQ68CQ4 756 aaKnown RBP17.55■□□□□ 0.4
CCDC57-205ENST00000392346 CEP162Q5TB80 1403 aa17.55■□□□□ 0.4
CCDC57-205ENST00000392346 YTHDC1Q96MU7 727 aaKnown RBP17.52■□□□□ 0.4
CCDC57-205ENST00000392346 CFTRP13569 1480 aa17.52■□□□□ 0.39
CCDC57-205ENST00000392346 CEP164Q9UPV0 1460 aa17.52■□□□□ 0.39
CCDC57-205ENST00000392346 MRC2Q9UBG0 1479 aa17.51■□□□□ 0.39
CCDC57-205ENST00000392346 HNRNPUL2Q1KMD3 747 aaKnown RBP17.5■□□□□ 0.39
CCDC57-205ENST00000392346 ACIN1Q9UKV3 1341 aaKnown RBP17.5■□□□□ 0.39
CCDC57-205ENST00000392346 FANCD2Q9BXW9 1451 aa17.5■□□□□ 0.39
CCDC57-205ENST00000392346 GTF3C3Q9Y5Q9 886 aa17.49■□□□□ 0.39
CCDC57-205ENST00000392346 NCBP3Q53F19 620 aaKnown RBP17.46■□□□□ 0.39
CCDC57-205ENST00000392346 CSRNP3Q8WYN3 585 aa17.42■□□□□ 0.38
CCDC57-205ENST00000392346 WDR62O43379 1518 aa17.41■□□□□ 0.38
CCDC57-205ENST00000392346 TNIKQ9UKE5 1360 aa17.32■□□□□ 0.36
CCDC57-205ENST00000392346 PRDM2Q13029 1718 aa17.32■□□□□ 0.36
CCDC57-205ENST00000392346 TIMELESSQ9UNS1 1208 aa17.31■□□□□ 0.36
CCDC57-205ENST00000392346 KLHL34Q8N239 644 aa17.31■□□□□ 0.36
CCDC57-205ENST00000392346 WRNQ14191 1432 aaPredicted RBP eCLIP17.3■□□□□ 0.36
CCDC57-205ENST00000392346 URB2Q14146 1524 aaKnown RBP17.28■□□□□ 0.36
CCDC57-205ENST00000392346 MIER1Q8N108 512 aa17.25■□□□□ 0.35
CCDC57-205ENST00000392346 ZNF316A6NFI3 1004 aaPredicted RBP17.25■□□□□ 0.35
CCDC57-205ENST00000392346 CENPBP07199 599 aaPredicted RBP17.24■□□□□ 0.35
CCDC57-205ENST00000392346 GOLGA3Q08378 1498 aa17.22■□□□□ 0.35
CCDC57-205ENST00000392346 SYNJ1O43426 1573 aa17.2■□□□□ 0.34
CCDC57-205ENST00000392346 AEBP2Q6ZN18 517 aaPredicted RBP17.19■□□□□ 0.34
CCDC57-205ENST00000392346 TOPBP1Q92547 1522 aa17.17■□□□□ 0.34
CCDC57-205ENST00000392346 CLIP1P30622 1438 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms