Protein–RNA interactions for Protein: O95983

MBD3, Methyl-CpG-binding domain protein 3, humanhuman

Predictions only

Length 291 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3O95983 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC19.56■□□□□ 0.72
MBD3O95983 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
MBD3O95983 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC19.56■□□□□ 0.72
MBD3O95983 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
MBD3O95983 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
MBD3O95983 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
MBD3O95983 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
MBD3O95983 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
MBD3O95983 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
MBD3O95983 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC19.56■□□□□ 0.72
MBD3O95983 MIR662-201ENST00000384847 95 ntBASIC19.56■□□□□ 0.72
MBD3O95983 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC19.56■□□□□ 0.72
MBD3O95983 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
MBD3O95983 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC19.56■□□□□ 0.72
MBD3O95983 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
MBD3O95983 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC19.56■□□□□ 0.72
MBD3O95983 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC19.56■□□□□ 0.72
MBD3O95983 CLN6-221ENST00000637494 765 ntTSL 5 BASIC19.56■□□□□ 0.72
MBD3O95983 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC19.56■□□□□ 0.72
MBD3O95983 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
MBD3O95983 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
MBD3O95983 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
MBD3O95983 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
MBD3O95983 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
MBD3O95983 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
MBD3O95983 AC009336.1-201ENST00000608941 1553 ntBASIC19.56■□□□□ 0.72
MBD3O95983 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
MBD3O95983 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC19.56■□□□□ 0.72
MBD3O95983 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
MBD3O95983 VILL-207ENST00000465644 1857 ntTSL 5 BASIC19.56■□□□□ 0.72
MBD3O95983 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
MBD3O95983 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
MBD3O95983 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
MBD3O95983 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC19.55■□□□□ 0.72
MBD3O95983 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC19.55■□□□□ 0.72
MBD3O95983 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC19.55■□□□□ 0.72
MBD3O95983 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
MBD3O95983 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC19.55■□□□□ 0.72
MBD3O95983 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC19.55■□□□□ 0.72
MBD3O95983 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC19.55■□□□□ 0.72
MBD3O95983 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
MBD3O95983 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC19.55■□□□□ 0.72
MBD3O95983 SPDYE15P-201ENST00000424157 909 ntBASIC19.55■□□□□ 0.72
MBD3O95983 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
MBD3O95983 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
MBD3O95983 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC19.55■□□□□ 0.72
MBD3O95983 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC19.55■□□□□ 0.72
MBD3O95983 AL138966.2-201ENST00000621997 464 ntBASIC19.55■□□□□ 0.72
MBD3O95983 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
MBD3O95983 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
MBD3O95983 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
MBD3O95983 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC19.55■□□□□ 0.72
MBD3O95983 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
MBD3O95983 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
MBD3O95983 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
MBD3O95983 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
MBD3O95983 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
MBD3O95983 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC19.55■□□□□ 0.72
MBD3O95983 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
MBD3O95983 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC19.55■□□□□ 0.72
MBD3O95983 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.72
MBD3O95983 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
MBD3O95983 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
MBD3O95983 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
MBD3O95983 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
MBD3O95983 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC19.54■□□□□ 0.72
MBD3O95983 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
MBD3O95983 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
MBD3O95983 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
MBD3O95983 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
MBD3O95983 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC19.54■□□□□ 0.72
MBD3O95983 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
MBD3O95983 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
MBD3O95983 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
MBD3O95983 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
MBD3O95983 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC19.54■□□□□ 0.72
MBD3O95983 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
MBD3O95983 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC19.54■□□□□ 0.72
MBD3O95983 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC19.54■□□□□ 0.72
MBD3O95983 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
MBD3O95983 AC008550.1-201ENST00000511500 884 ntBASIC19.54■□□□□ 0.72
MBD3O95983 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
MBD3O95983 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
MBD3O95983 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
MBD3O95983 AC092384.3-202ENST00000564646 2873 ntBASIC19.54■□□□□ 0.72
MBD3O95983 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
MBD3O95983 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
MBD3O95983 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
MBD3O95983 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
MBD3O95983 GCK-202ENST00000345378 2421 ntTSL 2 BASIC19.54■□□□□ 0.72
MBD3O95983 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
MBD3O95983 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
MBD3O95983 LINC00895-201ENST00000629028 1637 ntBASIC19.54■□□□□ 0.72
MBD3O95983 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
MBD3O95983 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
MBD3O95983 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
MBD3O95983 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
MBD3O95983 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
MBD3O95983 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC19.53■□□□□ 0.72
MBD3O95983 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 140.1 ms