RNA–Protein interactions for RNA: ENST00000368199.7

SH2D2A-202, Transcript of SH2 domain containing 2A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SH2D2A, Length 1,658 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D2A-202ENST00000368199 NISCHQ9Y2I1 1504 aa37.43■■■■□ 3.58
SH2D2A-202ENST00000368199 CCDC180Q9P1Z9 1646 aa32.68■■■□□ 2.82
SH2D2A-202ENST00000368199 ZCCHC6Q5VYS8 1495 aaKnown RBP31.46■■■□□ 2.63
SH2D2A-202ENST00000368199 DCAF1Q9Y4B6 1507 aa31.04■■■□□ 2.56
SH2D2A-202ENST00000368199 DCAF8L2P0C7V8 631 aa30.86■■■□□ 2.53
SH2D2A-202ENST00000368199 MYO15BQ96JP2 1530 aa30.67■■■□□ 2.5
SH2D2A-202ENST00000368199 ABCC9O60706 1549 aa30.67■■■□□ 2.5
SH2D2A-202ENST00000368199 SHROOM4Q9ULL8 1493 aa30.47■■■□□ 2.47
SH2D2A-202ENST00000368199 NACADO15069 1562 aa30.43■■■□□ 2.46
SH2D2A-202ENST00000368199 RB1CC1Q8TDY2 1594 aa30.14■■■□□ 2.42
SH2D2A-202ENST00000368199 SCRIBQ14160 1630 aa29.93■■■□□ 2.38
SH2D2A-202ENST00000368199 SUPT5HO00267 1087 aaKnown RBP29.44■■■□□ 2.3
SH2D2A-202ENST00000368199 UNC13AQ9UPW8 1703 aa29.35■■■□□ 2.29
SH2D2A-202ENST00000368199 BICRAQ9NZM4 1560 aa29.06■■■□□ 2.24
SH2D2A-202ENST00000368199 RSF1Q96T23 1441 aaPredicted RBP29.03■■■□□ 2.24
SH2D2A-202ENST00000368199 BAZ1AQ9NRL2 1556 aaPredicted RBP28.97■■■□□ 2.23
SH2D2A-202ENST00000368199 CECR2Q9BXF3 1484 aa28.96■■■□□ 2.23
SH2D2A-202ENST00000368199 PABPN1Q86U42 306 aaKnown RBP eCLIP28.9■■■□□ 2.22
SH2D2A-202ENST00000368199 MROH2BQ7Z745 1585 aa28.84■■■□□ 2.21
SH2D2A-202ENST00000368199 SMARCA4P51532 1647 aa28.75■■■□□ 2.19
SH2D2A-202ENST00000368199 WIZO95785 1651 aa28.61■■■□□ 2.17
SH2D2A-202ENST00000368199 PEG3Q9GZU2 1588 aa28.44■■■□□ 2.14
SH2D2A-202ENST00000368199 TOP2AP11388 1531 aaKnown RBP28.42■■■□□ 2.14
SH2D2A-202ENST00000368199 SMARCA2P51531 1590 aa28.34■■■□□ 2.13
SH2D2A-202ENST00000368199 ATAD2BQ9ULI0 1458 aa28.25■■■□□ 2.11
SH2D2A-202ENST00000368199 EIF4G1Q04637 1599 aaKnown RBP28.25■■■□□ 2.11
SH2D2A-202ENST00000368199 CHIC1Q5VXU3 224 aa28.23■■■□□ 2.11
SH2D2A-202ENST00000368199 BAZ1BQ9UIG0 1483 aaKnown RBP28.15■■■□□ 2.1
SH2D2A-202ENST00000368199 CCDC88BA6NC98 1476 aa28.08■■■□□ 2.09
SH2D2A-202ENST00000368199 NCAPD3P42695 1498 aa28.04■■■□□ 2.08
SH2D2A-202ENST00000368199 HMGXB3Q12766 1538 aa28.03■■■□□ 2.08
SH2D2A-202ENST00000368199 CC2D2AQ9P2K1 1620 aa27.79■■■□□ 2.04
SH2D2A-202ENST00000368199 TRIM41Q8WV44 630 aa27.78■■■□□ 2.04
SH2D2A-202ENST00000368199 DNAJC5BQ9UF47 199 aa27.57■■■□□ 2
SH2D2A-202ENST00000368199 ABCC8Q09428 1581 aa27.45■■□□□ 1.99
SH2D2A-202ENST00000368199 CFTRP13569 1480 aa27.42■■□□□ 1.98
SH2D2A-202ENST00000368199 WRNQ14191 1432 aaPredicted RBP eCLIP27.39■■□□□ 1.98
SH2D2A-202ENST00000368199 CADPSQ9ULU8 1353 aa27.33■■□□□ 1.97
SH2D2A-202ENST00000368199 PRDM2Q13029 1718 aa27.31■■□□□ 1.96
SH2D2A-202ENST00000368199 EEA1Q15075 1411 aa27.18■■□□□ 1.94
SH2D2A-202ENST00000368199 SYNJ1O43426 1573 aa27.17■■□□□ 1.94
SH2D2A-202ENST00000368199 TOP2BQ02880 1626 aa27.15■■□□□ 1.94
SH2D2A-202ENST00000368199 FAM9AQ8IZU1 332 aaPredicted RBP27.13■■□□□ 1.93
SH2D2A-202ENST00000368199 BIVM-ERCC5R4GMW8 1640 aa27.12■■□□□ 1.93
SH2D2A-202ENST00000368199 LAMC3Q9Y6N6 1575 aa27.11■■□□□ 1.93
SH2D2A-202ENST00000368199 LOC105371045A0A1W2PR82 267 aa27.07■■□□□ 1.92
SH2D2A-202ENST00000368199 FANCD2Q9BXW9 1451 aa27■■□□□ 1.91
SH2D2A-202ENST00000368199 CUX1P39880 1505 aa26.98■■□□□ 1.91
SH2D2A-202ENST00000368199 SOGA1O94964 1423 aa26.97■■□□□ 1.91
SH2D2A-202ENST00000368199 PDS5BQ9NTI5 1447 aa26.92■■□□□ 1.9
SH2D2A-202ENST00000368199 CSRNP3Q8WYN3 585 aa26.91■■□□□ 1.9
SH2D2A-202ENST00000368199 NESP48681 1621 aa26.9■■□□□ 1.9
SH2D2A-202ENST00000368199 CEP164Q9UPV0 1460 aa26.87■■□□□ 1.89
SH2D2A-202ENST00000368199 RUSC2Q8N2Y8 1516 aa26.81■■□□□ 1.88
SH2D2A-202ENST00000368199 DNMBPQ6XZF7 1577 aa26.8■■□□□ 1.88
SH2D2A-202ENST00000368199 KIF27Q86VH2 1401 aa26.75■■□□□ 1.87
SH2D2A-202ENST00000368199 GOLGA3Q08378 1498 aa26.73■■□□□ 1.87
SH2D2A-202ENST00000368199 KIF21BO75037 1637 aa26.71■■□□□ 1.87
SH2D2A-202ENST00000368199 FGD5Q6ZNL6 1462 aa26.71■■□□□ 1.87
SH2D2A-202ENST00000368199 TOPBP1Q92547 1522 aa26.71■■□□□ 1.87
SH2D2A-202ENST00000368199 EHMT2Q96KQ7 1210 aa26.66■■□□□ 1.86
SH2D2A-202ENST00000368199 TNIKQ9UKE5 1360 aa26.65■■□□□ 1.86
SH2D2A-202ENST00000368199 KIF21AQ7Z4S6 1674 aa26.62■■□□□ 1.85
SH2D2A-202ENST00000368199 URB2Q14146 1524 aaKnown RBP26.59■■□□□ 1.85
SH2D2A-202ENST00000368199 CUX2O14529 1486 aa26.58■■□□□ 1.85
SH2D2A-202ENST00000368199 UBTFP17480 764 aaKnown RBP26.58■■□□□ 1.85
SH2D2A-202ENST00000368199 POLA1P09884 1462 aaPredicted RBP26.57■■□□□ 1.84
SH2D2A-202ENST00000368199 ERICH3Q5RHP9 1530 aa26.55■■□□□ 1.84
SH2D2A-202ENST00000368199 ABCA10Q8WWZ4 1543 aa26.53■■□□□ 1.84
SH2D2A-202ENST00000368199 PRXQ9BXM0 1461 aa26.52■■□□□ 1.84
SH2D2A-202ENST00000368199 MRC2Q9UBG0 1479 aa26.51■■□□□ 1.83
SH2D2A-202ENST00000368199 CEP162Q5TB80 1403 aa26.46■■□□□ 1.83
SH2D2A-202ENST00000368199 RAPGEF2Q9Y4G8 1499 aa26.44■■□□□ 1.82
SH2D2A-202ENST00000368199 RAD54L2Q9Y4B4 1467 aa26.42■■□□□ 1.82
SH2D2A-202ENST00000368199 ERCC6Q03468 1493 aa26.4■■□□□ 1.82
SH2D2A-202ENST00000368199 IGF1RP08069 1367 aa26.4■■□□□ 1.82
SH2D2A-202ENST00000368199 WDR97A6NE52 1622 aa26.37■■□□□ 1.81
SH2D2A-202ENST00000368199 WDR62O43379 1518 aa26.35■■□□□ 1.81
SH2D2A-202ENST00000368199 CARMIL1Q5VZK9 1371 aa26.32■■□□□ 1.8
SH2D2A-202ENST00000368199 CUL7Q14999 1698 aa26.29■■□□□ 1.8
SH2D2A-202ENST00000368199 CLIP1P30622 1438 aa26.27■■□□□ 1.8
SH2D2A-202ENST00000368199 TARBP1Q13395 1621 aaKnown RBP26.27■■□□□ 1.8
SH2D2A-202ENST00000368199 ABCA5Q8WWZ7 1642 aa26.27■■□□□ 1.8
SH2D2A-202ENST00000368199 GAPVD1Q14C86 1478 aa26.25■■□□□ 1.79
SH2D2A-202ENST00000368199 IFT140Q96RY7 1462 aa26.24■■□□□ 1.79
SH2D2A-202ENST00000368199 THOC2Q8NI27 1593 aaKnown RBP26.19■■□□□ 1.78
SH2D2A-202ENST00000368199 TDRD9Q8NDG6 1382 aaKnown RBP26.19■■□□□ 1.78
SH2D2A-202ENST00000368199 TRIM26Q12899 539 aaPredicted RBP26.12■■□□□ 1.77
SH2D2A-202ENST00000368199 VPS8Q8N3P4 1428 aa26.06■■□□□ 1.76
SH2D2A-202ENST00000368199 PBRM1Q86U86 1689 aa26.06■■□□□ 1.76
SH2D2A-202ENST00000368199 GRIN2BQ13224 1484 aa26.06■■□□□ 1.76
SH2D2A-202ENST00000368199 PCGF6Q9BYE7 350 aa26.02■■□□□ 1.76
SH2D2A-202ENST00000368199 AQRO60306 1485 aaKnown RBP eCLIP26■■□□□ 1.75
SH2D2A-202ENST00000368199 FHAD1B1AJZ9 1412 aa26■■□□□ 1.75
SH2D2A-202ENST00000368199 RANGAP1P46060 587 aaPredicted RBP25.99■■□□□ 1.75
SH2D2A-202ENST00000368199 CTTNBP2Q8WZ74 1663 aa25.96■■□□□ 1.75
SH2D2A-202ENST00000368199 APLP2Q06481 763 aa25.95■■□□□ 1.74
SH2D2A-202ENST00000368199 ADAMTS12P58397 1594 aa25.93■■□□□ 1.74
SH2D2A-202ENST00000368199 ZNF608Q9ULD9 1512 aaPredicted RBP25.93■■□□□ 1.74
SH2D2A-202ENST00000368199 EIF4G3O43432 1585 aaKnown RBP25.92■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms