RNA–Protein interactions for RNA: ENST00000311764.2

ZNF408-201, Transcript of zinc finger protein 408, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF408, Length 2,442 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF408-201ENST00000311764 NISCHQ9Y2I1 1504 aa36.69■■■■□ 3.46
ZNF408-201ENST00000311764 CCDC180Q9P1Z9 1646 aa31.67■■■□□ 2.66
ZNF408-201ENST00000311764 ZCCHC6Q5VYS8 1495 aaKnown RBP30.87■■■□□ 2.53
ZNF408-201ENST00000311764 DCAF8L2P0C7V8 631 aa30.63■■■□□ 2.49
ZNF408-201ENST00000311764 SHROOM4Q9ULL8 1493 aa30.62■■■□□ 2.49
ZNF408-201ENST00000311764 DCAF1Q9Y4B6 1507 aa30.12■■■□□ 2.41
ZNF408-201ENST00000311764 ABCC9O60706 1549 aa30.03■■■□□ 2.4
ZNF408-201ENST00000311764 SUPT5HO00267 1087 aaKnown RBP29.6■■■□□ 2.33
ZNF408-201ENST00000311764 MYO15BQ96JP2 1530 aa29.58■■■□□ 2.33
ZNF408-201ENST00000311764 SCRIBQ14160 1630 aa29.51■■■□□ 2.31
ZNF408-201ENST00000311764 NACADO15069 1562 aa29.45■■■□□ 2.3
ZNF408-201ENST00000311764 RB1CC1Q8TDY2 1594 aa29.18■■■□□ 2.26
ZNF408-201ENST00000311764 UNC13AQ9UPW8 1703 aa28.73■■■□□ 2.19
ZNF408-201ENST00000311764 RSF1Q96T23 1441 aaPredicted RBP28.67■■■□□ 2.18
ZNF408-201ENST00000311764 CECR2Q9BXF3 1484 aa28.66■■■□□ 2.18
ZNF408-201ENST00000311764 PABPN1Q86U42 306 aaKnown RBP eCLIP28.5■■■□□ 2.15
ZNF408-201ENST00000311764 MROH2BQ7Z745 1585 aa28.48■■■□□ 2.15
ZNF408-201ENST00000311764 BICRAQ9NZM4 1560 aa28.38■■■□□ 2.13
ZNF408-201ENST00000311764 CHIC1Q5VXU3 224 aa28.33■■■□□ 2.13
ZNF408-201ENST00000311764 WIZO95785 1651 aa28.3■■■□□ 2.12
ZNF408-201ENST00000311764 BAZ1AQ9NRL2 1556 aaPredicted RBP28.27■■■□□ 2.12
ZNF408-201ENST00000311764 SMARCA4P51532 1647 aa28.15■■■□□ 2.1
ZNF408-201ENST00000311764 TOP2AP11388 1531 aaKnown RBP27.86■■■□□ 2.05
ZNF408-201ENST00000311764 CCDC88BA6NC98 1476 aa27.68■■■□□ 2.02
ZNF408-201ENST00000311764 SMARCA2P51531 1590 aa27.66■■■□□ 2.02
ZNF408-201ENST00000311764 PEG3Q9GZU2 1588 aa27.64■■■□□ 2.02
ZNF408-201ENST00000311764 TRIM41Q8WV44 630 aa27.64■■■□□ 2.02
ZNF408-201ENST00000311764 ATAD2BQ9ULI0 1458 aa27.61■■■□□ 2.01
ZNF408-201ENST00000311764 EIF4G1Q04637 1599 aaKnown RBP27.53■■■□□ 2
ZNF408-201ENST00000311764 BAZ1BQ9UIG0 1483 aaKnown RBP27.51■■□□□ 1.99
ZNF408-201ENST00000311764 LOC105371045A0A1W2PR82 267 aa27.45■■□□□ 1.98
ZNF408-201ENST00000311764 FAM9AQ8IZU1 332 aaPredicted RBP27.38■■□□□ 1.97
ZNF408-201ENST00000311764 ABCC8Q09428 1581 aa27.35■■□□□ 1.97
ZNF408-201ENST00000311764 NCAPD3P42695 1498 aa27.22■■□□□ 1.95
ZNF408-201ENST00000311764 HMGXB3Q12766 1538 aa27.18■■□□□ 1.94
ZNF408-201ENST00000311764 EHMT2Q96KQ7 1210 aa27.18■■□□□ 1.94
ZNF408-201ENST00000311764 CC2D2AQ9P2K1 1620 aa27.06■■□□□ 1.92
ZNF408-201ENST00000311764 WRNQ14191 1432 aaPredicted RBP eCLIP26.98■■□□□ 1.91
ZNF408-201ENST00000311764 SYNJ1O43426 1573 aa26.9■■□□□ 1.9
ZNF408-201ENST00000311764 SOGA1O94964 1423 aa26.88■■□□□ 1.89
ZNF408-201ENST00000311764 RUSC2Q8N2Y8 1516 aa26.8■■□□□ 1.88
ZNF408-201ENST00000311764 CFTRP13569 1480 aa26.76■■□□□ 1.87
ZNF408-201ENST00000311764 TOP2BQ02880 1626 aa26.64■■□□□ 1.86
ZNF408-201ENST00000311764 CADPSQ9ULU8 1353 aa26.63■■□□□ 1.85
ZNF408-201ENST00000311764 CSRNP3Q8WYN3 585 aa26.63■■□□□ 1.85
ZNF408-201ENST00000311764 EEA1Q15075 1411 aa26.6■■□□□ 1.85
ZNF408-201ENST00000311764 CUX1P39880 1505 aa26.58■■□□□ 1.85
ZNF408-201ENST00000311764 PRDM2Q13029 1718 aa26.58■■□□□ 1.85
ZNF408-201ENST00000311764 BIVM-ERCC5R4GMW8 1640 aa26.58■■□□□ 1.84
ZNF408-201ENST00000311764 PCGF6Q9BYE7 350 aa26.55■■□□□ 1.84
ZNF408-201ENST00000311764 DNAJC5BQ9UF47 199 aa26.55■■□□□ 1.84
ZNF408-201ENST00000311764 NESP48681 1621 aa26.48■■□□□ 1.83
ZNF408-201ENST00000311764 UBTFP17480 764 aaKnown RBP26.46■■□□□ 1.83
ZNF408-201ENST00000311764 FANCD2Q9BXW9 1451 aa26.4■■□□□ 1.82
ZNF408-201ENST00000311764 GOLGA3Q08378 1498 aa26.39■■□□□ 1.82
ZNF408-201ENST00000311764 CEP162Q5TB80 1403 aa26.35■■□□□ 1.81
ZNF408-201ENST00000311764 TNIKQ9UKE5 1360 aa26.35■■□□□ 1.81
ZNF408-201ENST00000311764 CEP164Q9UPV0 1460 aa26.34■■□□□ 1.81
ZNF408-201ENST00000311764 KIF21BO75037 1637 aa26.31■■□□□ 1.8
ZNF408-201ENST00000311764 PPARGC1BQ86YN6 1023 aaKnown RBP26.3■■□□□ 1.8
ZNF408-201ENST00000311764 RAPGEF2Q9Y4G8 1499 aa26.28■■□□□ 1.8
ZNF408-201ENST00000311764 TRIM26Q12899 539 aaPredicted RBP26.25■■□□□ 1.79
ZNF408-201ENST00000311764 FGD5Q6ZNL6 1462 aa26.25■■□□□ 1.79
ZNF408-201ENST00000311764 LAMC3Q9Y6N6 1575 aa26.24■■□□□ 1.79
ZNF408-201ENST00000311764 KIF27Q86VH2 1401 aa26.23■■□□□ 1.79
ZNF408-201ENST00000311764 RANGAP1P46060 587 aaPredicted RBP26.19■■□□□ 1.78
ZNF408-201ENST00000311764 CUX2O14529 1486 aa26.17■■□□□ 1.78
ZNF408-201ENST00000311764 DNMBPQ6XZF7 1577 aa26.13■■□□□ 1.77
ZNF408-201ENST00000311764 TOPBP1Q92547 1522 aa26.13■■□□□ 1.77
ZNF408-201ENST00000311764 PRXQ9BXM0 1461 aa26.11■■□□□ 1.77
ZNF408-201ENST00000311764 RAD54L2Q9Y4B4 1467 aa26.08■■□□□ 1.77
ZNF408-201ENST00000311764 PDS5BQ9NTI5 1447 aa26.08■■□□□ 1.76
ZNF408-201ENST00000311764 TTBK1Q5TCY1 1321 aaPredicted RBP26.08■■□□□ 1.76
ZNF408-201ENST00000311764 KIF21AQ7Z4S6 1674 aa26.07■■□□□ 1.76
ZNF408-201ENST00000311764 URB2Q14146 1524 aaKnown RBP26.06■■□□□ 1.76
ZNF408-201ENST00000311764 CLIP1P30622 1438 aa26.05■■□□□ 1.76
ZNF408-201ENST00000311764 POLA1P09884 1462 aaPredicted RBP26.05■■□□□ 1.76
ZNF408-201ENST00000311764 ERICH3Q5RHP9 1530 aa26.04■■□□□ 1.76
ZNF408-201ENST00000311764 IGF1RP08069 1367 aa26■■□□□ 1.75
ZNF408-201ENST00000311764 HRCP23327 699 aa25.91■■□□□ 1.74
ZNF408-201ENST00000311764 ABCA10Q8WWZ4 1543 aa25.91■■□□□ 1.74
ZNF408-201ENST00000311764 CARMIL1Q5VZK9 1371 aa25.89■■□□□ 1.73
ZNF408-201ENST00000311764 VPS8Q8N3P4 1428 aa25.82■■□□□ 1.72
ZNF408-201ENST00000311764 TDRD9Q8NDG6 1382 aaKnown RBP25.82■■□□□ 1.72
ZNF408-201ENST00000311764 WDR97A6NE52 1622 aa25.79■■□□□ 1.72
ZNF408-201ENST00000311764 ARAP1Q96P48 1450 aa25.75■■□□□ 1.71
ZNF408-201ENST00000311764 MRC2Q9UBG0 1479 aa25.74■■□□□ 1.71
ZNF408-201ENST00000311764 ABCA5Q8WWZ7 1642 aa25.69■■□□□ 1.7
ZNF408-201ENST00000311764 GAPVD1Q14C86 1478 aa25.68■■□□□ 1.7
ZNF408-201ENST00000311764 ARHGAP35Q9NRY4 1499 aa25.67■■□□□ 1.7
ZNF408-201ENST00000311764 APLP2Q06481 763 aa25.67■■□□□ 1.7
ZNF408-201ENST00000311764 TARBP1Q13395 1621 aaKnown RBP25.67■■□□□ 1.7
ZNF408-201ENST00000311764 ERCC6Q03468 1493 aa25.66■■□□□ 1.7
ZNF408-201ENST00000311764 CUL7Q14999 1698 aa25.65■■□□□ 1.7
ZNF408-201ENST00000311764 AQRO60306 1485 aaKnown RBP eCLIP25.58■■□□□ 1.692e-7■■■■■ 36.4
ZNF408-201ENST00000311764 P3H3Q8IVL6 736 aa25.56■■□□□ 1.68
ZNF408-201ENST00000311764 WDR62O43379 1518 aa25.55■■□□□ 1.68
ZNF408-201ENST00000311764 PBRM1Q86U86 1689 aa25.5■■□□□ 1.67
ZNF408-201ENST00000311764 ZNF608Q9ULD9 1512 aaPredicted RBP25.5■■□□□ 1.67
ZNF408-201ENST00000311764 CTTNBP2Q8WZ74 1663 aa25.48■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 193.1 ms