RNA–Protein interactions for RNA: ENST00000448257.6

CDK1-204, Transcript of cyclin dependent kinase 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CDK1, Length 1,948 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK1-204ENST00000448257 NISCHQ9Y2I1 1504 aa40.63■■■■■ 4.1
CDK1-204ENST00000448257 CCDC180Q9P1Z9 1646 aa35.95■■■■□ 3.35
CDK1-204ENST00000448257 ABCC9O60706 1549 aa34.83■■■■□ 3.17
CDK1-204ENST00000448257 ZCCHC6Q5VYS8 1495 aaKnown RBP33.95■■■■□ 3.02
CDK1-204ENST00000448257 DCAF8L2P0C7V8 631 aa33.76■■■□□ 2.99
CDK1-204ENST00000448257 NACADO15069 1562 aa33.68■■■□□ 2.98
CDK1-204ENST00000448257 RB1CC1Q8TDY2 1594 aa33.63■■■□□ 2.97
CDK1-204ENST00000448257 DCAF1Q9Y4B6 1507 aa33.61■■■□□ 2.97
CDK1-204ENST00000448257 MYO15BQ96JP2 1530 aa33.59■■■□□ 2.97
CDK1-204ENST00000448257 UNC13AQ9UPW8 1703 aa32.97■■■□□ 2.87
CDK1-204ENST00000448257 SCRIBQ14160 1630 aa32.88■■■□□ 2.85
CDK1-204ENST00000448257 BICRAQ9NZM4 1560 aa32.66■■■□□ 2.82
CDK1-204ENST00000448257 PABPN1Q86U42 306 aaKnown RBP eCLIP32.59■■■□□ 2.81
CDK1-204ENST00000448257 SHROOM4Q9ULL8 1493 aa32.37■■■□□ 2.77
CDK1-204ENST00000448257 EIF4G1Q04637 1599 aaKnown RBP31.75■■■□□ 2.67
CDK1-204ENST00000448257 CECR2Q9BXF3 1484 aa31.64■■■□□ 2.66
CDK1-204ENST00000448257 DNAJC5BQ9UF47 199 aa31.62■■■□□ 2.65
CDK1-204ENST00000448257 CC2D2AQ9P2K1 1620 aa31.53■■■□□ 2.64
CDK1-204ENST00000448257 SMARCA4P51532 1647 aa31.47■■■□□ 2.63
CDK1-204ENST00000448257 BAZ1AQ9NRL2 1556 aaPredicted RBP31.46■■■□□ 2.63
CDK1-204ENST00000448257 MROH2BQ7Z745 1585 aa31.36■■■□□ 2.61
CDK1-204ENST00000448257 ATAD2BQ9ULI0 1458 aa31.17■■■□□ 2.58
CDK1-204ENST00000448257 SMARCA2P51531 1590 aa31.14■■■□□ 2.57
CDK1-204ENST00000448257 PEG3Q9GZU2 1588 aa31.14■■■□□ 2.57
CDK1-204ENST00000448257 RSF1Q96T23 1441 aaPredicted RBP31.11■■■□□ 2.57
CDK1-204ENST00000448257 NCAPD3P42695 1498 aa31.08■■■□□ 2.57
CDK1-204ENST00000448257 WIZO95785 1651 aa31.05■■■□□ 2.56
CDK1-204ENST00000448257 HMGXB3Q12766 1538 aa30.98■■■□□ 2.55
CDK1-204ENST00000448257 BAZ1BQ9UIG0 1483 aaKnown RBP30.93■■■□□ 2.54
CDK1-204ENST00000448257 TOP2AP11388 1531 aaKnown RBP30.71■■■□□ 2.51
CDK1-204ENST00000448257 SUPT5HO00267 1087 aaKnown RBP30.6■■■□□ 2.49
CDK1-204ENST00000448257 CCDC88BA6NC98 1476 aa30.34■■■□□ 2.45
CDK1-204ENST00000448257 NESP48681 1621 aa30.28■■■□□ 2.44
CDK1-204ENST00000448257 LAMC3Q9Y6N6 1575 aa30.21■■■□□ 2.43
CDK1-204ENST00000448257 CADPSQ9ULU8 1353 aa30.19■■■□□ 2.42
CDK1-204ENST00000448257 CFTRP13569 1480 aa30.11■■■□□ 2.41
CDK1-204ENST00000448257 PRDM2Q13029 1718 aa29.95■■■□□ 2.39
CDK1-204ENST00000448257 PDS5BQ9NTI5 1447 aa29.95■■■□□ 2.39
CDK1-204ENST00000448257 ERCC6Q03468 1493 aa29.95■■■□□ 2.38
CDK1-204ENST00000448257 KIF21AQ7Z4S6 1674 aa29.94■■■□□ 2.38
CDK1-204ENST00000448257 FANCD2Q9BXW9 1451 aa29.87■■■□□ 2.37
CDK1-204ENST00000448257 CEP164Q9UPV0 1460 aa29.79■■■□□ 2.36
CDK1-204ENST00000448257 THOC2Q8NI27 1593 aaKnown RBP29.73■■■□□ 2.35
CDK1-204ENST00000448257 MRC2Q9UBG0 1479 aa29.66■■■□□ 2.34
CDK1-204ENST00000448257 WDR62O43379 1518 aa29.57■■■□□ 2.32
CDK1-204ENST00000448257 URB2Q14146 1524 aaKnown RBP29.57■■■□□ 2.32
CDK1-204ENST00000448257 CUX2O14529 1486 aa29.47■■■□□ 2.31
CDK1-204ENST00000448257 TOPBP1Q92547 1522 aa29.44■■■□□ 2.3
CDK1-204ENST00000448257 DNMBPQ6XZF7 1577 aa29.44■■■□□ 2.3
CDK1-204ENST00000448257 ABCC8Q09428 1581 aa29.4■■■□□ 2.3
CDK1-204ENST00000448257 CUX1P39880 1505 aa29.39■■■□□ 2.3
CDK1-204ENST00000448257 WRNQ14191 1432 aaPredicted RBP eCLIP29.31■■■□□ 2.28
CDK1-204ENST00000448257 SYNJ1O43426 1573 aa29.27■■■□□ 2.28
CDK1-204ENST00000448257 BIVM-ERCC5R4GMW8 1640 aa29.23■■■□□ 2.27
CDK1-204ENST00000448257 POLA1P09884 1462 aaPredicted RBP29.22■■■□□ 2.27
CDK1-204ENST00000448257 TOP2BQ02880 1626 aa29.22■■■□□ 2.27
CDK1-204ENST00000448257 FGD5Q6ZNL6 1462 aa29.21■■■□□ 2.27
CDK1-204ENST00000448257 IFT140Q96RY7 1462 aa29.12■■■□□ 2.25
CDK1-204ENST00000448257 TARBP1Q13395 1621 aaKnown RBP29.12■■■□□ 2.25
CDK1-204ENST00000448257 RAD54L2Q9Y4B4 1467 aa29.1■■■□□ 2.25
CDK1-204ENST00000448257 SOGA1O94964 1423 aa29.07■■■□□ 2.24
CDK1-204ENST00000448257 ZNF608Q9ULD9 1512 aaPredicted RBP29.02■■■□□ 2.24
CDK1-204ENST00000448257 WDR97A6NE52 1622 aa28.99■■■□□ 2.23
CDK1-204ENST00000448257 ABCA10Q8WWZ4 1543 aa28.93■■■□□ 2.22
CDK1-204ENST00000448257 EIF4G3O43432 1585 aaKnown RBP28.93■■■□□ 2.22
CDK1-204ENST00000448257 TDRD9Q8NDG6 1382 aaKnown RBP28.89■■■□□ 2.22
CDK1-204ENST00000448257 AQRO60306 1485 aaKnown RBP eCLIP28.89■■■□□ 2.222e-7■■■□□ 17.8
CDK1-204ENST00000448257 TRIM41Q8WV44 630 aa28.84■■■□□ 2.21
CDK1-204ENST00000448257 ABCA5Q8WWZ7 1642 aa28.82■■■□□ 2.2
CDK1-204ENST00000448257 CHIC1Q5VXU3 224 aa28.78■■■□□ 2.2
CDK1-204ENST00000448257 GAPVD1Q14C86 1478 aa28.76■■■□□ 2.19
CDK1-204ENST00000448257 PBRM1Q86U86 1689 aa28.72■■■□□ 2.19
CDK1-204ENST00000448257 GRIN2BQ13224 1484 aa28.69■■■□□ 2.18
CDK1-204ENST00000448257 KIF27Q86VH2 1401 aa28.64■■■□□ 2.18
CDK1-204ENST00000448257 SNAPC4Q5SXM2 1469 aa28.63■■■□□ 2.17
CDK1-204ENST00000448257 ERICH3Q5RHP9 1530 aa28.59■■■□□ 2.17
CDK1-204ENST00000448257 RUSC2Q8N2Y8 1516 aa28.58■■■□□ 2.17
CDK1-204ENST00000448257 MAGI1Q96QZ7 1491 aaPredicted RBP28.57■■■□□ 2.16
CDK1-204ENST00000448257 ADAMTS12P58397 1594 aa28.51■■■□□ 2.16
CDK1-204ENST00000448257 CHD1O14646 1710 aa28.5■■■□□ 2.15
CDK1-204ENST00000448257 IGF1RP08069 1367 aa28.49■■■□□ 2.15
CDK1-204ENST00000448257 SYNJ2O15056 1496 aa28.47■■■□□ 2.15
CDK1-204ENST00000448257 FBLN2P98095 1184 aa28.43■■■□□ 2.14
CDK1-204ENST00000448257 FHAD1B1AJZ9 1412 aa28.42■■■□□ 2.14
CDK1-204ENST00000448257 CUL7Q14999 1698 aa28.41■■■□□ 2.14
CDK1-204ENST00000448257 CHMP7Q8WUX9 453 aaPredicted RBP28.39■■■□□ 2.13
CDK1-204ENST00000448257 GRIN2AQ12879 1464 aa28.35■■■□□ 2.13
CDK1-204ENST00000448257 EEA1Q15075 1411 aa28.33■■■□□ 2.13
CDK1-204ENST00000448257 CARMIL1Q5VZK9 1371 aa28.32■■■□□ 2.12
CDK1-204ENST00000448257 OSCARQ8IYS5 282 aa28.3■■■□□ 2.12
CDK1-204ENST00000448257 FAM9AQ8IZU1 332 aaPredicted RBP28.29■■■□□ 2.12
CDK1-204ENST00000448257 CSRNP3Q8WYN3 585 aa28.24■■■□□ 2.11
CDK1-204ENST00000448257 CEP170Q5SW79 1584 aa28.22■■■□□ 2.11
CDK1-204ENST00000448257 PRXQ9BXM0 1461 aa28.22■■■□□ 2.11
CDK1-204ENST00000448257 RAPGEF2Q9Y4G8 1499 aa28.21■■■□□ 2.11
CDK1-204ENST00000448257 NUP160Q12769 1436 aa28.2■■■□□ 2.1
CDK1-204ENST00000448257 CLASP1Q7Z460 1538 aa28.18■■■□□ 2.1
CDK1-204ENST00000448257 DNAJC5Q9H3Z4 198 aa28.1■■■□□ 2.09
CDK1-204ENST00000448257 KIF21BO75037 1637 aa28.07■■■□□ 2.08
CDK1-204ENST00000448257 KIAA0586Q9BVV6 1533 aa28■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms