RNA–Protein interactions for RNA: ENST00000374421.7

IFNLR1-205, Transcript of interferon lambda receptor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene IFNLR1, Length 1,476 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFNLR1-205ENST00000374421 NISCHQ9Y2I1 1504 aa43.54■■■■■ 4.56
IFNLR1-205ENST00000374421 CCDC180Q9P1Z9 1646 aa38.77■■■■□ 3.8
IFNLR1-205ENST00000374421 ABCC9O60706 1549 aa37.53■■■■□ 3.6
IFNLR1-205ENST00000374421 NACADO15069 1562 aa36.34■■■■□ 3.41
IFNLR1-205ENST00000374421 RB1CC1Q8TDY2 1594 aa36.33■■■■□ 3.41
IFNLR1-205ENST00000374421 ZCCHC6Q5VYS8 1495 aaKnown RBP36.32■■■■□ 3.4
IFNLR1-205ENST00000374421 MYO15BQ96JP2 1530 aa36.21■■■■□ 3.39
IFNLR1-205ENST00000374421 DCAF8L2P0C7V8 631 aa36.14■■■■□ 3.38
IFNLR1-205ENST00000374421 DCAF1Q9Y4B6 1507 aa36.11■■■■□ 3.37
IFNLR1-205ENST00000374421 UNC13AQ9UPW8 1703 aa35.56■■■■□ 3.28
IFNLR1-205ENST00000374421 SCRIBQ14160 1630 aa35.25■■■■□ 3.23
IFNLR1-205ENST00000374421 BICRAQ9NZM4 1560 aa35.15■■■■□ 3.22
IFNLR1-205ENST00000374421 PABPN1Q86U42 306 aaKnown RBP eCLIP35.01■■■■□ 3.19
IFNLR1-205ENST00000374421 SHROOM4Q9ULL8 1493 aa34.95■■■■□ 3.18
IFNLR1-205ENST00000374421 EIF4G1Q04637 1599 aaKnown RBP34.24■■■■□ 3.07
IFNLR1-205ENST00000374421 DNAJC5BQ9UF47 199 aa34.13■■■■□ 3.05
IFNLR1-205ENST00000374421 CC2D2AQ9P2K1 1620 aa34.04■■■■□ 3.04
IFNLR1-205ENST00000374421 CECR2Q9BXF3 1484 aa33.8■■■■□ 3
IFNLR1-205ENST00000374421 BAZ1AQ9NRL2 1556 aaPredicted RBP33.79■■■■□ 3
IFNLR1-205ENST00000374421 SMARCA4P51532 1647 aa33.78■■■■□ 3
IFNLR1-205ENST00000374421 SMARCA2P51531 1590 aa33.55■■■□□ 2.96
IFNLR1-205ENST00000374421 MROH2BQ7Z745 1585 aa33.5■■■□□ 2.95
IFNLR1-205ENST00000374421 PEG3Q9GZU2 1588 aa33.48■■■□□ 2.95
IFNLR1-205ENST00000374421 ATAD2BQ9ULI0 1458 aa33.48■■■□□ 2.95
IFNLR1-205ENST00000374421 NCAPD3P42695 1498 aa33.46■■■□□ 2.95
IFNLR1-205ENST00000374421 HMGXB3Q12766 1538 aa33.39■■■□□ 2.94
IFNLR1-205ENST00000374421 BAZ1BQ9UIG0 1483 aaKnown RBP33.27■■■□□ 2.92
IFNLR1-205ENST00000374421 WIZO95785 1651 aa33.2■■■□□ 2.9
IFNLR1-205ENST00000374421 RSF1Q96T23 1441 aaPredicted RBP33.19■■■□□ 2.9
IFNLR1-205ENST00000374421 TOP2AP11388 1531 aaKnown RBP32.89■■■□□ 2.86
IFNLR1-205ENST00000374421 LAMC3Q9Y6N6 1575 aa32.63■■■□□ 2.81
IFNLR1-205ENST00000374421 NESP48681 1621 aa32.51■■■□□ 2.8
IFNLR1-205ENST00000374421 CADPSQ9ULU8 1353 aa32.46■■■□□ 2.79
IFNLR1-205ENST00000374421 CCDC88BA6NC98 1476 aa32.42■■■□□ 2.78
IFNLR1-205ENST00000374421 ERCC6Q03468 1493 aa32.41■■■□□ 2.78
IFNLR1-205ENST00000374421 SUPT5HO00267 1087 aaKnown RBP32.4■■■□□ 2.78
IFNLR1-205ENST00000374421 CFTRP13569 1480 aa32.35■■■□□ 2.77
IFNLR1-205ENST00000374421 PDS5BQ9NTI5 1447 aa32.34■■■□□ 2.77
IFNLR1-205ENST00000374421 PRDM2Q13029 1718 aa32.32■■■□□ 2.76
IFNLR1-205ENST00000374421 KIF21AQ7Z4S6 1674 aa32.28■■■□□ 2.76
IFNLR1-205ENST00000374421 FANCD2Q9BXW9 1451 aa32.11■■■□□ 2.73
IFNLR1-205ENST00000374421 THOC2Q8NI27 1593 aaKnown RBP32.1■■■□□ 2.73
IFNLR1-205ENST00000374421 CEP164Q9UPV0 1460 aa32.09■■■□□ 2.73
IFNLR1-205ENST00000374421 CUX2O14529 1486 aa32.03■■■□□ 2.72
IFNLR1-205ENST00000374421 MRC2Q9UBG0 1479 aa31.99■■■□□ 2.71
IFNLR1-205ENST00000374421 WDR62O43379 1518 aa31.91■■■□□ 2.7
IFNLR1-205ENST00000374421 URB2Q14146 1524 aaKnown RBP31.76■■■□□ 2.67
IFNLR1-205ENST00000374421 ABCC8Q09428 1581 aa31.72■■■□□ 2.67
IFNLR1-205ENST00000374421 DNMBPQ6XZF7 1577 aa31.66■■■□□ 2.66
IFNLR1-205ENST00000374421 TOPBP1Q92547 1522 aa31.63■■■□□ 2.65
IFNLR1-205ENST00000374421 CUX1P39880 1505 aa31.44■■■□□ 2.62
IFNLR1-205ENST00000374421 IFT140Q96RY7 1462 aa31.4■■■□□ 2.62
IFNLR1-205ENST00000374421 POLA1P09884 1462 aaPredicted RBP31.37■■■□□ 2.61
IFNLR1-205ENST00000374421 WRNQ14191 1432 aaPredicted RBP eCLIP31.32■■■□□ 2.6
IFNLR1-205ENST00000374421 BIVM-ERCC5R4GMW8 1640 aa31.32■■■□□ 2.6
IFNLR1-205ENST00000374421 FGD5Q6ZNL6 1462 aa31.32■■■□□ 2.6
IFNLR1-205ENST00000374421 TARBP1Q13395 1621 aaKnown RBP31.31■■■□□ 2.6
IFNLR1-205ENST00000374421 TOP2BQ02880 1626 aa31.3■■■□□ 2.6
IFNLR1-205ENST00000374421 SYNJ1O43426 1573 aa31.24■■■□□ 2.59
IFNLR1-205ENST00000374421 SOGA1O94964 1423 aa31.21■■■□□ 2.59
IFNLR1-205ENST00000374421 WDR97A6NE52 1622 aa31.18■■■□□ 2.58
IFNLR1-205ENST00000374421 EIF4G3O43432 1585 aaKnown RBP31.17■■■□□ 2.58
IFNLR1-205ENST00000374421 ZNF608Q9ULD9 1512 aaPredicted RBP31.16■■■□□ 2.58
IFNLR1-205ENST00000374421 RAD54L2Q9Y4B4 1467 aa31.15■■■□□ 2.58
IFNLR1-205ENST00000374421 ABCA10Q8WWZ4 1543 aa31.05■■■□□ 2.56
IFNLR1-205ENST00000374421 AQRO60306 1485 aaKnown RBP eCLIP30.99■■■□□ 2.55
IFNLR1-205ENST00000374421 TDRD9Q8NDG6 1382 aaKnown RBP30.96■■■□□ 2.55
IFNLR1-205ENST00000374421 ABCA5Q8WWZ7 1642 aa30.95■■■□□ 2.55
IFNLR1-205ENST00000374421 PBRM1Q86U86 1689 aa30.92■■■□□ 2.54
IFNLR1-205ENST00000374421 GAPVD1Q14C86 1478 aa30.9■■■□□ 2.54
IFNLR1-205ENST00000374421 GRIN2BQ13224 1484 aa30.87■■■□□ 2.53
IFNLR1-205ENST00000374421 MAGI1Q96QZ7 1491 aaPredicted RBP30.81■■■□□ 2.52
IFNLR1-205ENST00000374421 SNAPC4Q5SXM2 1469 aa30.77■■■□□ 2.52
IFNLR1-205ENST00000374421 CHD1O14646 1710 aa30.76■■■□□ 2.52
IFNLR1-205ENST00000374421 ERICH3Q5RHP9 1530 aa30.72■■■□□ 2.51
IFNLR1-205ENST00000374421 DNAJC5Q9H3Z4 198 aa30.7■■■□□ 2.5
IFNLR1-205ENST00000374421 KIF27Q86VH2 1401 aa30.68■■■□□ 2.5
IFNLR1-205ENST00000374421 SYNJ2O15056 1496 aa30.67■■■□□ 2.5
IFNLR1-205ENST00000374421 TRIM41Q8WV44 630 aa30.66■■■□□ 2.5
IFNLR1-205ENST00000374421 OSCARQ8IYS5 282 aa30.65■■■□□ 2.5
IFNLR1-205ENST00000374421 ADAMTS12P58397 1594 aa30.63■■■□□ 2.49
IFNLR1-205ENST00000374421 FBLN2P98095 1184 aa30.57■■■□□ 2.48
IFNLR1-205ENST00000374421 CHMP7Q8WUX9 453 aaPredicted RBP30.57■■■□□ 2.48
IFNLR1-205ENST00000374421 FHAD1B1AJZ9 1412 aa30.55■■■□□ 2.48
IFNLR1-205ENST00000374421 CUL7Q14999 1698 aa30.54■■■□□ 2.48
IFNLR1-205ENST00000374421 GRIN2AQ12879 1464 aa30.48■■■□□ 2.47
IFNLR1-205ENST00000374421 IGF1RP08069 1367 aa30.43■■■□□ 2.46
IFNLR1-205ENST00000374421 CLASP1Q7Z460 1538 aa30.38■■■□□ 2.45
IFNLR1-205ENST00000374421 CHIC1Q5VXU3 224 aa30.35■■■□□ 2.45
IFNLR1-205ENST00000374421 RUSC2Q8N2Y8 1516 aa30.32■■■□□ 2.44
IFNLR1-205ENST00000374421 NUP160Q12769 1436 aa30.32■■■□□ 2.44
IFNLR1-205ENST00000374421 CEP170Q5SW79 1584 aa30.31■■■□□ 2.44
IFNLR1-205ENST00000374421 CARMIL1Q5VZK9 1371 aa30.3■■■□□ 2.44
IFNLR1-205ENST00000374421 EEA1Q15075 1411 aa30.26■■■□□ 2.44
IFNLR1-205ENST00000374421 ARHGEF11O15085 1522 aa30.2■■■□□ 2.43
IFNLR1-205ENST00000374421 RIMBP3CA6NJZ7 1639 aa30.2■■■□□ 2.43
IFNLR1-205ENST00000374421 RIMBP3BA6NNM3 1639 aa30.2■■■□□ 2.43
IFNLR1-205ENST00000374421 RIMBP3Q9UFD9 1639 aa30.2■■■□□ 2.43
IFNLR1-205ENST00000374421 RAPGEF2Q9Y4G8 1499 aa30.18■■■□□ 2.42
IFNLR1-205ENST00000374421 SHROOM2Q13796 1616 aa30.14■■■□□ 2.42
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms