RNA–Protein interactions for RNA: ENST00000414097.6

NDRG1-202, Transcript of N-myc downstream regulated 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene NDRG1, Length 3,755 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDRG1-202ENST00000414097 NISCHQ9Y2I1 1504 aa32.23■■■□□ 2.75
NDRG1-202ENST00000414097 DCAF8L2P0C7V8 631 aa28.36■■■□□ 2.13
NDRG1-202ENST00000414097 SUPT5HO00267 1087 aaKnown RBP28.13■■■□□ 2.09
NDRG1-202ENST00000414097 SHROOM4Q9ULL8 1493 aa27.93■■■□□ 2.06
NDRG1-202ENST00000414097 CCDC180Q9P1Z9 1646 aa27.42■■□□□ 1.98
NDRG1-202ENST00000414097 EHMT2Q96KQ7 1210 aa27.42■■□□□ 1.98
NDRG1-202ENST00000414097 ZCCHC6Q5VYS8 1495 aaKnown RBP27.16■■□□□ 1.94
NDRG1-202ENST00000414097 PCGF6Q9BYE7 350 aa27■■□□□ 1.91
NDRG1-202ENST00000414097 FAM9AQ8IZU1 332 aaPredicted RBP26.54■■□□□ 1.84
NDRG1-202ENST00000414097 TTBK1Q5TCY1 1321 aaPredicted RBP26.45■■□□□ 1.82
NDRG1-202ENST00000414097 PPARGC1BQ86YN6 1023 aaKnown RBP26.38■■□□□ 1.81
NDRG1-202ENST00000414097 ABCC9O60706 1549 aa26.38■■□□□ 1.81
NDRG1-202ENST00000414097 DCAF1Q9Y4B6 1507 aa26.33■■□□□ 1.81
NDRG1-202ENST00000414097 LOC105371045A0A1W2PR82 267 aa26.06■■□□□ 1.76
NDRG1-202ENST00000414097 HRCP23327 699 aa25.9■■□□□ 1.74
NDRG1-202ENST00000414097 SCRIBQ14160 1630 aa25.89■■□□□ 1.74
NDRG1-202ENST00000414097 CHIC1Q5VXU3 224 aa25.82■■□□□ 1.72
NDRG1-202ENST00000414097 MYO15BQ96JP2 1530 aa25.68■■□□□ 1.7
NDRG1-202ENST00000414097 RANGAP1P46060 587 aaPredicted RBP25.59■■□□□ 1.69
NDRG1-202ENST00000414097 NACADO15069 1562 aa25.59■■□□□ 1.69
NDRG1-202ENST00000414097 YTHDC1Q96MU7 727 aaKnown RBP25.5■■□□□ 1.67
NDRG1-202ENST00000414097 TRIM41Q8WV44 630 aa25.47■■□□□ 1.67
NDRG1-202ENST00000414097 RSF1Q96T23 1441 aaPredicted RBP25.43■■□□□ 1.66
NDRG1-202ENST00000414097 CCER1Q8TC90 406 aaPredicted RBP25.43■■□□□ 1.66
NDRG1-202ENST00000414097 PABPN1Q86U42 306 aaKnown RBP eCLIP25.39■■□□□ 1.657e-17■□□□□ 9
NDRG1-202ENST00000414097 RB1CC1Q8TDY2 1594 aa25.38■■□□□ 1.65
NDRG1-202ENST00000414097 CECR2Q9BXF3 1484 aa25.25■■□□□ 1.63
NDRG1-202ENST00000414097 TRIM26Q12899 539 aaPredicted RBP25.21■■□□□ 1.63
NDRG1-202ENST00000414097 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.12■■□□□ 1.61
NDRG1-202ENST00000414097 MROH2BQ7Z745 1585 aa25.08■■□□□ 1.61
NDRG1-202ENST00000414097 ZEB1P37275 1124 aaPredicted RBP24.91■■□□□ 1.58
NDRG1-202ENST00000414097 WIZO95785 1651 aa24.91■■□□□ 1.58
NDRG1-202ENST00000414097 CENPBP07199 599 aaPredicted RBP24.9■■□□□ 1.58
NDRG1-202ENST00000414097 UBTFP17480 764 aaKnown RBP24.88■■□□□ 1.57
NDRG1-202ENST00000414097 BAZ1AQ9NRL2 1556 aaPredicted RBP24.8■■□□□ 1.56
NDRG1-202ENST00000414097 APLP2Q06481 763 aa24.8■■□□□ 1.56
NDRG1-202ENST00000414097 UNC13AQ9UPW8 1703 aa24.72■■□□□ 1.55
NDRG1-202ENST00000414097 HNRNPUL2Q1KMD3 747 aaKnown RBP24.71■■□□□ 1.55
NDRG1-202ENST00000414097 PELP1Q8IZL8 1130 aaKnown RBP24.63■■□□□ 1.53
NDRG1-202ENST00000414097 GTF3C3Q9Y5Q9 886 aa24.61■■□□□ 1.53
NDRG1-202ENST00000414097 SMARCA4P51532 1647 aa24.59■■□□□ 1.53
NDRG1-202ENST00000414097 ITGAEP38570 1179 aa24.54■■□□□ 1.52
NDRG1-202ENST00000414097 DIEXFQ68CQ4 756 aaKnown RBP24.54■■□□□ 1.52
NDRG1-202ENST00000414097 ATP1B4Q9UN42 357 aaPredicted RBP24.52■■□□□ 1.52
NDRG1-202ENST00000414097 BICRAQ9NZM4 1560 aa24.49■■□□□ 1.51
NDRG1-202ENST00000414097 TOP2AP11388 1531 aaKnown RBP24.47■■□□□ 1.51
NDRG1-202ENST00000414097 CCDC88BA6NC98 1476 aa24.44■■□□□ 1.5
NDRG1-202ENST00000414097 SCAF1Q9H7N4 1312 aaKnown RBP24.42■■□□□ 1.5
NDRG1-202ENST00000414097 SMARCA2P51531 1590 aa24.33■■□□□ 1.49
NDRG1-202ENST00000414097 ABCC8Q09428 1581 aa24.29■■□□□ 1.48
NDRG1-202ENST00000414097 CNGB1Q14028 1251 aaPredicted RBP24.28■■□□□ 1.48
NDRG1-202ENST00000414097 EIF4G1Q04637 1599 aaKnown RBP24.27■■□□□ 1.48
NDRG1-202ENST00000414097 BAZ1BQ9UIG0 1483 aaKnown RBP24.26■■□□□ 1.47
NDRG1-202ENST00000414097 NEUROD1Q13562 356 aa24.26■■□□□ 1.47
NDRG1-202ENST00000414097 BCANQ96GW7 911 aa24.21■■□□□ 1.47
NDRG1-202ENST00000414097 ATAD2BQ9ULI0 1458 aa24.17■■□□□ 1.46
NDRG1-202ENST00000414097 CSRNP3Q8WYN3 585 aa24.17■■□□□ 1.46
NDRG1-202ENST00000414097 ACIN1Q9UKV3 1341 aaKnown RBP24.15■■□□□ 1.46
NDRG1-202ENST00000414097 WRNQ14191 1432 aaPredicted RBP eCLIP24.06■■□□□ 1.44
NDRG1-202ENST00000414097 PEG3Q9GZU2 1588 aa24.05■■□□□ 1.44
NDRG1-202ENST00000414097 SOGA1O94964 1423 aa24.03■■□□□ 1.44
NDRG1-202ENST00000414097 ERICH6Q7L0X2 663 aa23.93■■□□□ 1.42
NDRG1-202ENST00000414097 RUSC2Q8N2Y8 1516 aa23.92■■□□□ 1.42
NDRG1-202ENST00000414097 NEFLP07196 543 aa23.83■■□□□ 1.41
NDRG1-202ENST00000414097 EEA1Q15075 1411 aa23.83■■□□□ 1.4
NDRG1-202ENST00000414097 ZNF316A6NFI3 1004 aaPredicted RBP23.78■■□□□ 1.4
NDRG1-202ENST00000414097 POLR3GLQ9BT43 218 aa23.77■■□□□ 1.4
NDRG1-202ENST00000414097 SYNJ1O43426 1573 aa23.75■■□□□ 1.39
NDRG1-202ENST00000414097 CEP162Q5TB80 1403 aa23.75■■□□□ 1.39
NDRG1-202ENST00000414097 NCAPD3P42695 1498 aa23.74■■□□□ 1.39
NDRG1-202ENST00000414097 TNIKQ9UKE5 1360 aa23.71■■□□□ 1.39
NDRG1-202ENST00000414097 MIER1Q8N108 512 aa23.71■■□□□ 1.39
NDRG1-202ENST00000414097 GOLGA3Q08378 1498 aa23.68■■□□□ 1.38
NDRG1-202ENST00000414097 CEP164Q9UPV0 1460 aa23.58■■□□□ 1.37
NDRG1-202ENST00000414097 HMGXB3Q12766 1538 aa23.56■■□□□ 1.36
NDRG1-202ENST00000414097 MYT1Q01538 1121 aa23.56■■□□□ 1.36
NDRG1-202ENST00000414097 HIRIP3Q9BW71 556 aaPredicted RBP23.55■■□□□ 1.36
NDRG1-202ENST00000414097 CLIP1P30622 1438 aa23.53■■□□□ 1.36
NDRG1-202ENST00000414097 FAM50AQ14320 339 aaKnown RBP23.52■■□□□ 1.36
NDRG1-202ENST00000414097 CADPSQ9ULU8 1353 aa23.49■■□□□ 1.35
NDRG1-202ENST00000414097 KIF27Q86VH2 1401 aa23.45■■□□□ 1.35
NDRG1-202ENST00000414097 TOP2BQ02880 1626 aa23.45■■□□□ 1.34
NDRG1-202ENST00000414097 RAPGEF2Q9Y4G8 1499 aa23.44■■□□□ 1.34
NDRG1-202ENST00000414097 P3H3Q8IVL6 736 aa23.44■■□□□ 1.34
NDRG1-202ENST00000414097 CFTRP13569 1480 aa23.41■■□□□ 1.34
NDRG1-202ENST00000414097 KIF21BO75037 1637 aa23.38■■□□□ 1.33
NDRG1-202ENST00000414097 CC2D2AQ9P2K1 1620 aa23.37■■□□□ 1.33
NDRG1-202ENST00000414097 SENP3-EIF4A1A0A087X0R7 540 aa23.36■■□□□ 1.33
NDRG1-202ENST00000414097 CUX1P39880 1505 aa23.35■■□□□ 1.33
NDRG1-202ENST00000414097 TRIM52Q96A61 297 aa23.35■■□□□ 1.33
NDRG1-202ENST00000414097 FKBP8Q14318 412 aa23.32■■□□□ 1.32
NDRG1-202ENST00000414097 CUX2O14529 1486 aa23.32■■□□□ 1.32
NDRG1-202ENST00000414097 BIVM-ERCC5R4GMW8 1640 aa23.31■■□□□ 1.32
NDRG1-202ENST00000414097 DDX10Q13206 875 aaKnown RBP23.31■■□□□ 1.32
NDRG1-202ENST00000414097 ARID3CA6NKF2 412 aa23.3■■□□□ 1.32
NDRG1-202ENST00000414097 IRX6P78412 446 aaPredicted RBP23.29■■□□□ 1.32
NDRG1-202ENST00000414097 FANCD2Q9BXW9 1451 aa23.22■■□□□ 1.31
NDRG1-202ENST00000414097 VPS8Q8N3P4 1428 aa23.2■■□□□ 1.3
NDRG1-202ENST00000414097 PRXQ9BXM0 1461 aa23.18■■□□□ 1.3
NDRG1-202ENST00000414097 DNAJC5BQ9UF47 199 aa23.18■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms