RNA–Protein interactions for RNA: ENST00000370341.3

LINC00029-201, long intergenic non-protein coding RNA 29, humanhuman

TSL 1 (best) BASIC

Gene LINC00029, Length 1,631 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00029-201ENST00000370341 NISCHQ9Y2I1 1504 aa39.69■■■■□ 3.94
LINC00029-201ENST00000370341 CCDC180Q9P1Z9 1646 aa34.83■■■■□ 3.17
LINC00029-201ENST00000370341 ABCC9O60706 1549 aa33.45■■■□□ 2.95
LINC00029-201ENST00000370341 ZCCHC6Q5VYS8 1495 aaKnown RBP33.25■■■□□ 2.91
LINC00029-201ENST00000370341 DCAF8L2P0C7V8 631 aa32.93■■■□□ 2.86
LINC00029-201ENST00000370341 DCAF1Q9Y4B6 1507 aa32.84■■■□□ 2.85
LINC00029-201ENST00000370341 MYO15BQ96JP2 1530 aa32.62■■■□□ 2.81
LINC00029-201ENST00000370341 NACADO15069 1562 aa32.54■■■□□ 2.8
LINC00029-201ENST00000370341 RB1CC1Q8TDY2 1594 aa32.36■■■□□ 2.77
LINC00029-201ENST00000370341 SHROOM4Q9ULL8 1493 aa32.07■■■□□ 2.72
LINC00029-201ENST00000370341 SCRIBQ14160 1630 aa31.93■■■□□ 2.7
LINC00029-201ENST00000370341 UNC13AQ9UPW8 1703 aa31.69■■■□□ 2.66
LINC00029-201ENST00000370341 BICRAQ9NZM4 1560 aa31.42■■■□□ 2.62
LINC00029-201ENST00000370341 PABPN1Q86U42 306 aaKnown RBP eCLIP31.38■■■□□ 2.61
LINC00029-201ENST00000370341 CECR2Q9BXF3 1484 aa30.84■■■□□ 2.53
LINC00029-201ENST00000370341 BAZ1AQ9NRL2 1556 aaPredicted RBP30.7■■■□□ 2.51
LINC00029-201ENST00000370341 SUPT5HO00267 1087 aaKnown RBP30.69■■■□□ 2.5
LINC00029-201ENST00000370341 MROH2BQ7Z745 1585 aa30.63■■■□□ 2.49
LINC00029-201ENST00000370341 RSF1Q96T23 1441 aaPredicted RBP30.62■■■□□ 2.49
LINC00029-201ENST00000370341 SMARCA4P51532 1647 aa30.6■■■□□ 2.49
LINC00029-201ENST00000370341 EIF4G1Q04637 1599 aaKnown RBP30.52■■■□□ 2.48
LINC00029-201ENST00000370341 WIZO95785 1651 aa30.36■■■□□ 2.45
LINC00029-201ENST00000370341 CC2D2AQ9P2K1 1620 aa30.26■■■□□ 2.44
LINC00029-201ENST00000370341 DNAJC5BQ9UF47 199 aa30.25■■■□□ 2.43
LINC00029-201ENST00000370341 PEG3Q9GZU2 1588 aa30.25■■■□□ 2.43
LINC00029-201ENST00000370341 SMARCA2P51531 1590 aa30.2■■■□□ 2.43
LINC00029-201ENST00000370341 ATAD2BQ9ULI0 1458 aa30.19■■■□□ 2.42
LINC00029-201ENST00000370341 TOP2AP11388 1531 aaKnown RBP30.06■■■□□ 2.4
LINC00029-201ENST00000370341 NCAPD3P42695 1498 aa30.02■■■□□ 2.4
LINC00029-201ENST00000370341 BAZ1BQ9UIG0 1483 aaKnown RBP30.02■■■□□ 2.4
LINC00029-201ENST00000370341 HMGXB3Q12766 1538 aa29.95■■■□□ 2.38
LINC00029-201ENST00000370341 CCDC88BA6NC98 1476 aa29.73■■■□□ 2.35
LINC00029-201ENST00000370341 CFTRP13569 1480 aa29.24■■■□□ 2.27
LINC00029-201ENST00000370341 CADPSQ9ULU8 1353 aa29.23■■■□□ 2.27
LINC00029-201ENST00000370341 CHIC1Q5VXU3 224 aa29.15■■■□□ 2.26
LINC00029-201ENST00000370341 NESP48681 1621 aa29.14■■■□□ 2.25
LINC00029-201ENST00000370341 LAMC3Q9Y6N6 1575 aa29.08■■■□□ 2.25
LINC00029-201ENST00000370341 PRDM2Q13029 1718 aa29.07■■■□□ 2.24
LINC00029-201ENST00000370341 ABCC8Q09428 1581 aa28.96■■■□□ 2.23
LINC00029-201ENST00000370341 TRIM41Q8WV44 630 aa28.91■■■□□ 2.22
LINC00029-201ENST00000370341 FANCD2Q9BXW9 1451 aa28.89■■■□□ 2.22
LINC00029-201ENST00000370341 PDS5BQ9NTI5 1447 aa28.89■■■□□ 2.22
LINC00029-201ENST00000370341 WRNQ14191 1432 aaPredicted RBP eCLIP28.86■■■□□ 2.21
LINC00029-201ENST00000370341 CEP164Q9UPV0 1460 aa28.77■■■□□ 2.2
LINC00029-201ENST00000370341 KIF21AQ7Z4S6 1674 aa28.77■■■□□ 2.2
LINC00029-201ENST00000370341 ERCC6Q03468 1493 aa28.74■■■□□ 2.19
LINC00029-201ENST00000370341 SYNJ1O43426 1573 aa28.72■■■□□ 2.19
LINC00029-201ENST00000370341 CUX1P39880 1505 aa28.67■■■□□ 2.18
LINC00029-201ENST00000370341 TOP2BQ02880 1626 aa28.67■■■□□ 2.18
LINC00029-201ENST00000370341 BIVM-ERCC5R4GMW8 1640 aa28.64■■■□□ 2.18
LINC00029-201ENST00000370341 DNMBPQ6XZF7 1577 aa28.57■■■□□ 2.16
LINC00029-201ENST00000370341 MRC2Q9UBG0 1479 aa28.54■■■□□ 2.16
LINC00029-201ENST00000370341 URB2Q14146 1524 aaKnown RBP28.54■■■□□ 2.16
LINC00029-201ENST00000370341 TOPBP1Q92547 1522 aa28.53■■■□□ 2.16
LINC00029-201ENST00000370341 THOC2Q8NI27 1593 aaKnown RBP28.53■■■□□ 2.16
LINC00029-201ENST00000370341 FGD5Q6ZNL6 1462 aa28.43■■■□□ 2.14
LINC00029-201ENST00000370341 WDR62O43379 1518 aa28.43■■■□□ 2.14
LINC00029-201ENST00000370341 POLA1P09884 1462 aaPredicted RBP28.36■■■□□ 2.13
LINC00029-201ENST00000370341 SOGA1O94964 1423 aa28.33■■■□□ 2.13
LINC00029-201ENST00000370341 FAM9AQ8IZU1 332 aaPredicted RBP28.33■■■□□ 2.13
LINC00029-201ENST00000370341 EEA1Q15075 1411 aa28.27■■■□□ 2.12
LINC00029-201ENST00000370341 RAD54L2Q9Y4B4 1467 aa28.25■■■□□ 2.11
LINC00029-201ENST00000370341 RUSC2Q8N2Y8 1516 aa28.24■■■□□ 2.11
LINC00029-201ENST00000370341 CUX2O14529 1486 aa28.21■■■□□ 2.11
LINC00029-201ENST00000370341 ABCA10Q8WWZ4 1543 aa28.19■■■□□ 2.1
LINC00029-201ENST00000370341 KIF27Q86VH2 1401 aa28.19■■■□□ 2.1
LINC00029-201ENST00000370341 CSRNP3Q8WYN3 585 aa28.14■■■□□ 2.09
LINC00029-201ENST00000370341 TARBP1Q13395 1621 aaKnown RBP28.13■■■□□ 2.09
LINC00029-201ENST00000370341 IFT140Q96RY7 1462 aa28.11■■■□□ 2.09
LINC00029-201ENST00000370341 WDR97A6NE52 1622 aa28.1■■■□□ 2.09
LINC00029-201ENST00000370341 TDRD9Q8NDG6 1382 aaKnown RBP28.02■■■□□ 2.08
LINC00029-201ENST00000370341 LOC105371045A0A1W2PR82 267 aa28■■■□□ 2.07
LINC00029-201ENST00000370341 ABCA5Q8WWZ7 1642 aa27.98■■■□□ 2.07
LINC00029-201ENST00000370341 GAPVD1Q14C86 1478 aa27.96■■■□□ 2.07
LINC00029-201ENST00000370341 IGF1RP08069 1367 aa27.95■■■□□ 2.07
LINC00029-201ENST00000370341 ZNF608Q9ULD9 1512 aaPredicted RBP27.95■■■□□ 2.07
LINC00029-201ENST00000370341 EHMT2Q96KQ7 1210 aa27.93■■■□□ 2.06
LINC00029-201ENST00000370341 AQRO60306 1485 aaKnown RBP eCLIP27.91■■■□□ 2.06
LINC00029-201ENST00000370341 KIF21BO75037 1637 aa27.89■■■□□ 2.05
LINC00029-201ENST00000370341 ERICH3Q5RHP9 1530 aa27.87■■■□□ 2.05
LINC00029-201ENST00000370341 PRXQ9BXM0 1461 aa27.86■■■□□ 2.05
LINC00029-201ENST00000370341 GOLGA3Q08378 1498 aa27.83■■■□□ 2.05
LINC00029-201ENST00000370341 EIF4G3O43432 1585 aaKnown RBP27.83■■■□□ 2.05
LINC00029-201ENST00000370341 CARMIL1Q5VZK9 1371 aa27.82■■■□□ 2.04
LINC00029-201ENST00000370341 PBRM1Q86U86 1689 aa27.82■■■□□ 2.04
LINC00029-201ENST00000370341 GRIN2BQ13224 1484 aa27.81■■■□□ 2.04
LINC00029-201ENST00000370341 CUL7Q14999 1698 aa27.8■■■□□ 2.04
LINC00029-201ENST00000370341 RAPGEF2Q9Y4G8 1499 aa27.79■■■□□ 2.04
LINC00029-201ENST00000370341 UBTFP17480 764 aaKnown RBP27.75■■■□□ 2.03
LINC00029-201ENST00000370341 TNIKQ9UKE5 1360 aa27.67■■■□□ 2.02
LINC00029-201ENST00000370341 FHAD1B1AJZ9 1412 aa27.66■■■□□ 2.02
LINC00029-201ENST00000370341 SNAPC4Q5SXM2 1469 aa27.66■■■□□ 2.02
LINC00029-201ENST00000370341 ADAMTS12P58397 1594 aa27.64■■■□□ 2.02
LINC00029-201ENST00000370341 MAGI1Q96QZ7 1491 aaPredicted RBP27.63■■■□□ 2.01
LINC00029-201ENST00000370341 SYNJ2O15056 1496 aa27.52■■■□□ 2
LINC00029-201ENST00000370341 CHMP7Q8WUX9 453 aaPredicted RBP27.5■■□□□ 1.99
LINC00029-201ENST00000370341 CEP162Q5TB80 1403 aa27.48■■□□□ 1.99
LINC00029-201ENST00000370341 FBLN2P98095 1184 aa27.46■■□□□ 1.99
LINC00029-201ENST00000370341 GRIN2AQ12879 1464 aa27.45■■□□□ 1.99
LINC00029-201ENST00000370341 CTTNBP2Q8WZ74 1663 aa27.41■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms