RNA–Protein interactions for RNA: ENST00000216155.11

SYNGR1-201, Transcript of synaptogyrin 1, humanhuman

TSL 3 BASIC

Gene SYNGR1, Length 497 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR1-201ENST00000216155 NISCHQ9Y2I1 1504 aa49.65■■■■■ 5.54
SYNGR1-201ENST00000216155 CCDC180Q9P1Z9 1646 aa44.61■■■■■ 4.73
SYNGR1-201ENST00000216155 ABCC9O60706 1549 aa44.6■■■■■ 4.73
SYNGR1-201ENST00000216155 RB1CC1Q8TDY2 1594 aa42.44■■■■■ 4.39
SYNGR1-201ENST00000216155 NACADO15069 1562 aa42.15■■■■■ 4.34
SYNGR1-201ENST00000216155 DNAJC5BQ9UF47 199 aa41.83■■■■■ 4.29
SYNGR1-201ENST00000216155 DCAF8L2P0C7V8 631 aa41.78■■■■■ 4.28
SYNGR1-201ENST00000216155 MYO15BQ96JP2 1530 aa41.57■■■■■ 4.25
SYNGR1-201ENST00000216155 UNC13AQ9UPW8 1703 aa41.55■■■■■ 4.24
SYNGR1-201ENST00000216155 PABPN1Q86U42 306 aaKnown RBP eCLIP41.46■■■■■ 4.23
SYNGR1-201ENST00000216155 BICRAQ9NZM4 1560 aa41.25■■■■■ 4.19
SYNGR1-201ENST00000216155 ZCCHC6Q5VYS8 1495 aaKnown RBP41.19■■■■■ 4.18
SYNGR1-201ENST00000216155 DCAF1Q9Y4B6 1507 aa41.03■■■■■ 4.16
SYNGR1-201ENST00000216155 SHROOM4Q9ULL8 1493 aa40.68■■■■■ 4.1
SYNGR1-201ENST00000216155 SCRIBQ14160 1630 aa40.64■■■■■ 4.1
SYNGR1-201ENST00000216155 CC2D2AQ9P2K1 1620 aa40.31■■■■■ 4.04
SYNGR1-201ENST00000216155 EIF4G1Q04637 1599 aaKnown RBP40.23■■■■■ 4.03
SYNGR1-201ENST00000216155 CECR2Q9BXF3 1484 aa40.18■■■■■ 4.02
SYNGR1-201ENST00000216155 NCAPD3P42695 1498 aa38.9■■■■□ 3.82
SYNGR1-201ENST00000216155 ATAD2BQ9ULI0 1458 aa38.79■■■■□ 3.8
SYNGR1-201ENST00000216155 SMARCA4P51532 1647 aa38.77■■■■□ 3.8
SYNGR1-201ENST00000216155 SMARCA2P51531 1590 aa38.68■■■■□ 3.78
SYNGR1-201ENST00000216155 HMGXB3Q12766 1538 aa38.65■■■■□ 3.78
SYNGR1-201ENST00000216155 BAZ1AQ9NRL2 1556 aaPredicted RBP38.55■■■■□ 3.76
SYNGR1-201ENST00000216155 ERCC6Q03468 1493 aa38.49■■■■□ 3.75
SYNGR1-201ENST00000216155 CUX2O14529 1486 aa38.47■■■■□ 3.75
SYNGR1-201ENST00000216155 BAZ1BQ9UIG0 1483 aaKnown RBP38.41■■■■□ 3.74
SYNGR1-201ENST00000216155 PEG3Q9GZU2 1588 aa38.4■■■■□ 3.74
SYNGR1-201ENST00000216155 DNAJC5Q9H3Z4 198 aa38.4■■■■□ 3.74
SYNGR1-201ENST00000216155 NESP48681 1621 aa38.32■■■■□ 3.73
SYNGR1-201ENST00000216155 MROH2BQ7Z745 1585 aa38.27■■■■□ 3.72
SYNGR1-201ENST00000216155 LAMC3Q9Y6N6 1575 aa38.05■■■■□ 3.68
SYNGR1-201ENST00000216155 THOC2Q8NI27 1593 aaKnown RBP38■■■■□ 3.67
SYNGR1-201ENST00000216155 KIF21AQ7Z4S6 1674 aa37.85■■■■□ 3.65
SYNGR1-201ENST00000216155 WIZO95785 1651 aa37.82■■■■□ 3.64
SYNGR1-201ENST00000216155 PDS5BQ9NTI5 1447 aa37.78■■■■□ 3.64
SYNGR1-201ENST00000216155 CADPSQ9ULU8 1353 aa37.69■■■■□ 3.62
SYNGR1-201ENST00000216155 MRC2Q9UBG0 1479 aa37.51■■■■□ 3.59
SYNGR1-201ENST00000216155 WDR62O43379 1518 aa37.45■■■■□ 3.59
SYNGR1-201ENST00000216155 RSF1Q96T23 1441 aaPredicted RBP37.44■■■■□ 3.58
SYNGR1-201ENST00000216155 TOP2AP11388 1531 aaKnown RBP37.35■■■■□ 3.57
SYNGR1-201ENST00000216155 CEP164Q9UPV0 1460 aa37.34■■■■□ 3.57
SYNGR1-201ENST00000216155 CFTRP13569 1480 aa37.29■■■■□ 3.56
SYNGR1-201ENST00000216155 FANCD2Q9BXW9 1451 aa37.29■■■■□ 3.56
SYNGR1-201ENST00000216155 URB2Q14146 1524 aaKnown RBP37.01■■■■□ 3.52
SYNGR1-201ENST00000216155 PRDM2Q13029 1718 aa36.97■■■■□ 3.51
SYNGR1-201ENST00000216155 CCDC88BA6NC98 1476 aa36.88■■■■□ 3.5
SYNGR1-201ENST00000216155 TRIM41Q8WV44 630 aa36.7■■■■□ 3.47
SYNGR1-201ENST00000216155 OSCARQ8IYS5 282 aa36.6■■■■□ 3.45
SYNGR1-201ENST00000216155 TOPBP1Q92547 1522 aa36.59■■■■□ 3.45
SYNGR1-201ENST00000216155 IFT140Q96RY7 1462 aa36.59■■■■□ 3.45
SYNGR1-201ENST00000216155 ZNF608Q9ULD9 1512 aaPredicted RBP36.55■■■■□ 3.44
SYNGR1-201ENST00000216155 ABCC8Q09428 1581 aa36.47■■■■□ 3.43
SYNGR1-201ENST00000216155 DNMBPQ6XZF7 1577 aa36.47■■■■□ 3.43
SYNGR1-201ENST00000216155 EIF4G3O43432 1585 aaKnown RBP36.39■■■■□ 3.42
SYNGR1-201ENST00000216155 TARBP1Q13395 1621 aaKnown RBP36.3■■■■□ 3.4
SYNGR1-201ENST00000216155 RIMBP3CA6NJZ7 1639 aa36.25■■■■□ 3.39
SYNGR1-201ENST00000216155 RIMBP3BA6NNM3 1639 aa36.25■■■■□ 3.39
SYNGR1-201ENST00000216155 RIMBP3Q9UFD9 1639 aa36.25■■■■□ 3.39
SYNGR1-201ENST00000216155 POLA1P09884 1462 aaPredicted RBP36.23■■■■□ 3.39
SYNGR1-201ENST00000216155 AQRO60306 1485 aaKnown RBP eCLIP36.18■■■■□ 3.382e-8■■■■■ 32.9
SYNGR1-201ENST00000216155 ARHGEF11O15085 1522 aa36.13■■■■□ 3.37
SYNGR1-201ENST00000216155 CHD1O14646 1710 aa36.11■■■■□ 3.37
SYNGR1-201ENST00000216155 RAD54L2Q9Y4B4 1467 aa36.08■■■■□ 3.37
SYNGR1-201ENST00000216155 SOGA1O94964 1423 aa36■■■■□ 3.35
SYNGR1-201ENST00000216155 FGD5Q6ZNL6 1462 aa35.99■■■■□ 3.35
SYNGR1-201ENST00000216155 CUX1P39880 1505 aa35.97■■■■□ 3.35
SYNGR1-201ENST00000216155 TDRD9Q8NDG6 1382 aaKnown RBP35.94■■■■□ 3.34
SYNGR1-201ENST00000216155 WDR97A6NE52 1622 aa35.93■■■■□ 3.34
SYNGR1-201ENST00000216155 FBLN2P98095 1184 aa35.88■■■■□ 3.33
SYNGR1-201ENST00000216155 SNAPC4Q5SXM2 1469 aa35.86■■■■□ 3.33
SYNGR1-201ENST00000216155 ARAP1Q96P48 1450 aa35.79■■■■□ 3.32
SYNGR1-201ENST00000216155 CYB5RLQ6IPT4 315 aa35.76■■■■□ 3.32
SYNGR1-201ENST00000216155 MAGI1Q96QZ7 1491 aaPredicted RBP35.75■■■■□ 3.31
SYNGR1-201ENST00000216155 GRIN2BQ13224 1484 aa35.73■■■■□ 3.31
SYNGR1-201ENST00000216155 CLASP1Q7Z460 1538 aa35.71■■■■□ 3.31
SYNGR1-201ENST00000216155 SUPT5HO00267 1087 aaKnown RBP35.66■■■■□ 3.3
SYNGR1-201ENST00000216155 SYNJ1O43426 1573 aa35.65■■■■□ 3.3
SYNGR1-201ENST00000216155 PBRM1Q86U86 1689 aa35.65■■■■□ 3.3
SYNGR1-201ENST00000216155 SYNJ2O15056 1496 aa35.62■■■■□ 3.29
SYNGR1-201ENST00000216155 CHMP7Q8WUX9 453 aaPredicted RBP35.62■■■■□ 3.29
SYNGR1-201ENST00000216155 GAPVD1Q14C86 1478 aa35.6■■■■□ 3.29
SYNGR1-201ENST00000216155 ABCA10Q8WWZ4 1543 aa35.58■■■■□ 3.29
SYNGR1-201ENST00000216155 ABCA5Q8WWZ7 1642 aa35.57■■■■□ 3.29
SYNGR1-201ENST00000216155 BIVM-ERCC5R4GMW8 1640 aa35.4■■■■□ 3.26
SYNGR1-201ENST00000216155 WRNQ14191 1432 aaPredicted RBP eCLIP35.39■■■■□ 3.26
SYNGR1-201ENST00000216155 TOP2BQ02880 1626 aa35.38■■■■□ 3.25
SYNGR1-201ENST00000216155 TRHP20396 242 aaPredicted RBP35.35■■■■□ 3.25
SYNGR1-201ENST00000216155 ADAMTS12P58397 1594 aa35.31■■■■□ 3.24
SYNGR1-201ENST00000216155 GRIN2AQ12879 1464 aa35.29■■■■□ 3.24
SYNGR1-201ENST00000216155 CEP170Q5SW79 1584 aa35.2■■■■□ 3.23
SYNGR1-201ENST00000216155 NUP160Q12769 1436 aa35.18■■■■□ 3.22
SYNGR1-201ENST00000216155 ERCC6L2Q5T890 1561 aa35.15■■■■□ 3.22
SYNGR1-201ENST00000216155 FHAD1B1AJZ9 1412 aa35.14■■■■□ 3.22
SYNGR1-201ENST00000216155 ERICH3Q5RHP9 1530 aa35.13■■■■□ 3.21
SYNGR1-201ENST00000216155 SHROOM2Q13796 1616 aa35.05■■■■□ 3.2
SYNGR1-201ENST00000216155 RUSC2Q8N2Y8 1516 aa34.82■■■■□ 3.16
SYNGR1-201ENST00000216155 PRG4Q92954 1404 aaPredicted RBP34.79■■■■□ 3.16
SYNGR1-201ENST00000216155 JPH4Q96JJ6 628 aa34.72■■■■□ 3.15
SYNGR1-201ENST00000216155 KIF27Q86VH2 1401 aa34.64■■■■□ 3.14
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms