RNA–Protein interactions for RNA: ENST00000556131.1

KRAS-203, Transcript of KRAS proto-oncogene, GTPase, humanhuman

TSL 1 (best) BASIC

Gene KRAS, Length 1,696 nt, Biotype protein coding, Subcellular localisation Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRAS-203ENST00000556131 NISCHQ9Y2I1 1504 aa46.61■■■■■ 5.05
KRAS-203ENST00000556131 CCDC180Q9P1Z9 1646 aa41.56■■■■■ 4.24
KRAS-203ENST00000556131 ABCC9O60706 1549 aa41.17■■■■■ 4.18
KRAS-203ENST00000556131 RB1CC1Q8TDY2 1594 aa39.3■■■■□ 3.88
KRAS-203ENST00000556131 NACADO15069 1562 aa39.14■■■■□ 3.86
KRAS-203ENST00000556131 DCAF8L2P0C7V8 631 aa39.13■■■■□ 3.85
KRAS-203ENST00000556131 ZCCHC6Q5VYS8 1495 aaKnown RBP38.77■■■■□ 3.8
KRAS-203ENST00000556131 MYO15BQ96JP2 1530 aa38.73■■■■□ 3.79
KRAS-203ENST00000556131 UNC13AQ9UPW8 1703 aa38.53■■■■□ 3.76
KRAS-203ENST00000556131 DCAF1Q9Y4B6 1507 aa38.46■■■■□ 3.75
KRAS-203ENST00000556131 PABPN1Q86U42 306 aaKnown RBP eCLIP38.41■■■■□ 3.74
KRAS-203ENST00000556131 BICRAQ9NZM4 1560 aa38.24■■■■□ 3.71
KRAS-203ENST00000556131 DNAJC5BQ9UF47 199 aa38.16■■■■□ 3.7
KRAS-203ENST00000556131 SCRIBQ14160 1630 aa38.04■■■■□ 3.68
KRAS-203ENST00000556131 SHROOM4Q9ULL8 1493 aa37.6■■■■□ 3.61
KRAS-203ENST00000556131 EIF4G1Q04637 1599 aaKnown RBP37.22■■■■□ 3.55
KRAS-203ENST00000556131 CC2D2AQ9P2K1 1620 aa37.18■■■■□ 3.54
KRAS-203ENST00000556131 CECR2Q9BXF3 1484 aa36.97■■■■□ 3.51
KRAS-203ENST00000556131 SMARCA4P51532 1647 aa36.28■■■■□ 3.4
KRAS-203ENST00000556131 ATAD2BQ9ULI0 1458 aa36.16■■■■□ 3.38
KRAS-203ENST00000556131 NCAPD3P42695 1498 aa36.14■■■■□ 3.38
KRAS-203ENST00000556131 BAZ1AQ9NRL2 1556 aaPredicted RBP36.12■■■■□ 3.37
KRAS-203ENST00000556131 SMARCA2P51531 1590 aa36.03■■■■□ 3.36
KRAS-203ENST00000556131 MROH2BQ7Z745 1585 aa35.99■■■■□ 3.35
KRAS-203ENST00000556131 HMGXB3Q12766 1538 aa35.94■■■■□ 3.34
KRAS-203ENST00000556131 PEG3Q9GZU2 1588 aa35.87■■■■□ 3.33
KRAS-203ENST00000556131 BAZ1BQ9UIG0 1483 aaKnown RBP35.83■■■■□ 3.33
KRAS-203ENST00000556131 WIZO95785 1651 aa35.6■■■■□ 3.29
KRAS-203ENST00000556131 NESP48681 1621 aa35.55■■■■□ 3.28
KRAS-203ENST00000556131 ERCC6Q03468 1493 aa35.43■■■■□ 3.26
KRAS-203ENST00000556131 RSF1Q96T23 1441 aaPredicted RBP35.4■■■■□ 3.26
KRAS-203ENST00000556131 LAMC3Q9Y6N6 1575 aa35.25■■■■□ 3.23
KRAS-203ENST00000556131 CUX2O14529 1486 aa35.14■■■■□ 3.22
KRAS-203ENST00000556131 TOP2AP11388 1531 aaKnown RBP35.12■■■■□ 3.21
KRAS-203ENST00000556131 KIF21AQ7Z4S6 1674 aa35.08■■■■□ 3.21
KRAS-203ENST00000556131 CADPSQ9ULU8 1353 aa35.07■■■■□ 3.21
KRAS-203ENST00000556131 THOC2Q8NI27 1593 aaKnown RBP35.05■■■■□ 3.2
KRAS-203ENST00000556131 PDS5BQ9NTI5 1447 aa34.99■■■■□ 3.19
KRAS-203ENST00000556131 CFTRP13569 1480 aa34.81■■■■□ 3.16
KRAS-203ENST00000556131 CCDC88BA6NC98 1476 aa34.73■■■■□ 3.15
KRAS-203ENST00000556131 FANCD2Q9BXW9 1451 aa34.73■■■■□ 3.15
KRAS-203ENST00000556131 MRC2Q9UBG0 1479 aa34.73■■■■□ 3.15
KRAS-203ENST00000556131 CEP164Q9UPV0 1460 aa34.7■■■■□ 3.14
KRAS-203ENST00000556131 WDR62O43379 1518 aa34.64■■■■□ 3.14
KRAS-203ENST00000556131 DNAJC5Q9H3Z4 198 aa34.51■■■■□ 3.12
KRAS-203ENST00000556131 PRDM2Q13029 1718 aa34.51■■■■□ 3.12
KRAS-203ENST00000556131 URB2Q14146 1524 aaKnown RBP34.46■■■■□ 3.11
KRAS-203ENST00000556131 SUPT5HO00267 1087 aaKnown RBP34.25■■■■□ 3.07
KRAS-203ENST00000556131 TOPBP1Q92547 1522 aa34.14■■■■□ 3.06
KRAS-203ENST00000556131 DNMBPQ6XZF7 1577 aa34.04■■■■□ 3.04
KRAS-203ENST00000556131 ZNF608Q9ULD9 1512 aaPredicted RBP33.97■■■■□ 3.03
KRAS-203ENST00000556131 ABCC8Q09428 1581 aa33.95■■■■□ 3.03
KRAS-203ENST00000556131 IFT140Q96RY7 1462 aa33.95■■■■□ 3.03
KRAS-203ENST00000556131 POLA1P09884 1462 aaPredicted RBP33.83■■■■□ 3.01
KRAS-203ENST00000556131 TARBP1Q13395 1621 aaKnown RBP33.81■■■■□ 3
KRAS-203ENST00000556131 EIF4G3O43432 1585 aaKnown RBP33.79■■■■□ 3
KRAS-203ENST00000556131 CUX1P39880 1505 aa33.78■■■■□ 3
KRAS-203ENST00000556131 RAD54L2Q9Y4B4 1467 aa33.74■■■□□ 2.99
KRAS-203ENST00000556131 FGD5Q6ZNL6 1462 aa33.71■■■□□ 2.99
KRAS-203ENST00000556131 AQRO60306 1485 aaKnown RBP eCLIP33.68■■■□□ 2.98
KRAS-203ENST00000556131 SOGA1O94964 1423 aa33.63■■■□□ 2.97
KRAS-203ENST00000556131 OSCARQ8IYS5 282 aa33.58■■■□□ 2.97
KRAS-203ENST00000556131 TDRD9Q8NDG6 1382 aaKnown RBP33.56■■■□□ 2.96
KRAS-203ENST00000556131 WDR97A6NE52 1622 aa33.46■■■□□ 2.95
KRAS-203ENST00000556131 CHD1O14646 1710 aa33.44■■■□□ 2.94
KRAS-203ENST00000556131 SYNJ1O43426 1573 aa33.39■■■□□ 2.94
KRAS-203ENST00000556131 SNAPC4Q5SXM2 1469 aa33.37■■■□□ 2.93
KRAS-203ENST00000556131 WRNQ14191 1432 aaPredicted RBP eCLIP33.36■■■□□ 2.93
KRAS-203ENST00000556131 BIVM-ERCC5R4GMW8 1640 aa33.34■■■□□ 2.93
KRAS-203ENST00000556131 TOP2BQ02880 1626 aa33.33■■■□□ 2.93
KRAS-203ENST00000556131 FBLN2P98095 1184 aa33.32■■■□□ 2.92
KRAS-203ENST00000556131 TRIM41Q8WV44 630 aa33.32■■■□□ 2.92
KRAS-203ENST00000556131 ABCA10Q8WWZ4 1543 aa33.3■■■□□ 2.92
KRAS-203ENST00000556131 GRIN2BQ13224 1484 aa33.27■■■□□ 2.92
KRAS-203ENST00000556131 ABCA5Q8WWZ7 1642 aa33.26■■■□□ 2.92
KRAS-203ENST00000556131 PBRM1Q86U86 1689 aa33.25■■■□□ 2.91
KRAS-203ENST00000556131 GAPVD1Q14C86 1478 aa33.25■■■□□ 2.91
KRAS-203ENST00000556131 RIMBP3CA6NJZ7 1639 aa33.23■■■□□ 2.91
KRAS-203ENST00000556131 RIMBP3BA6NNM3 1639 aa33.23■■■□□ 2.91
KRAS-203ENST00000556131 RIMBP3Q9UFD9 1639 aa33.23■■■□□ 2.91
KRAS-203ENST00000556131 MAGI1Q96QZ7 1491 aaPredicted RBP33.21■■■□□ 2.91
KRAS-203ENST00000556131 ARHGEF11O15085 1522 aa33.16■■■□□ 2.9
KRAS-203ENST00000556131 SYNJ2O15056 1496 aa33.11■■■□□ 2.89
KRAS-203ENST00000556131 CHMP7Q8WUX9 453 aaPredicted RBP33.1■■■□□ 2.89
KRAS-203ENST00000556131 CLASP1Q7Z460 1538 aa33.04■■■□□ 2.88
KRAS-203ENST00000556131 ADAMTS12P58397 1594 aa32.98■■■□□ 2.87
KRAS-203ENST00000556131 ARAP1Q96P48 1450 aa32.91■■■□□ 2.86
KRAS-203ENST00000556131 GRIN2AQ12879 1464 aa32.89■■■□□ 2.86
KRAS-203ENST00000556131 ERICH3Q5RHP9 1530 aa32.87■■■□□ 2.85
KRAS-203ENST00000556131 CYB5RLQ6IPT4 315 aa32.85■■■□□ 2.85
KRAS-203ENST00000556131 FHAD1B1AJZ9 1412 aa32.83■■■□□ 2.85
KRAS-203ENST00000556131 CEP170Q5SW79 1584 aa32.81■■■□□ 2.84
KRAS-203ENST00000556131 NUP160Q12769 1436 aa32.75■■■□□ 2.83
KRAS-203ENST00000556131 ERCC6L2Q5T890 1561 aa32.65■■■□□ 2.82
KRAS-203ENST00000556131 KIF27Q86VH2 1401 aa32.64■■■□□ 2.82
KRAS-203ENST00000556131 IGF1RP08069 1367 aa32.6■■■□□ 2.81
KRAS-203ENST00000556131 SHROOM2Q13796 1616 aa32.56■■■□□ 2.8
KRAS-203ENST00000556131 CUL7Q14999 1698 aa32.51■■■□□ 2.8
KRAS-203ENST00000556131 RUSC2Q8N2Y8 1516 aa32.51■■■□□ 2.79
KRAS-203ENST00000556131 PRG4Q92954 1404 aaPredicted RBP32.39■■■□□ 2.78
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms