RNA–Protein interactions for RNA: ENST00000339711.8

PRDM8-201, Transcript of PR/SET domain 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRDM8, Length 4,095 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM8-201ENST00000339711 NISCHQ9Y2I1 1504 aa32.99■■■□□ 2.87
PRDM8-201ENST00000339711 DCAF8L2P0C7V8 631 aa29.71■■■□□ 2.35
PRDM8-201ENST00000339711 SHROOM4Q9ULL8 1493 aa28.97■■■□□ 2.23
PRDM8-201ENST00000339711 SUPT5HO00267 1087 aaKnown RBP28.59■■■□□ 2.17
PRDM8-201ENST00000339711 CCDC180Q9P1Z9 1646 aa27.83■■■□□ 2.05
PRDM8-201ENST00000339711 ZCCHC6Q5VYS8 1495 aaKnown RBP27.59■■■□□ 2.01
PRDM8-201ENST00000339711 ABCC9O60706 1549 aa27.39■■□□□ 1.98
PRDM8-201ENST00000339711 CHIC1Q5VXU3 224 aa26.73■■□□□ 1.87
PRDM8-201ENST00000339711 DCAF1Q9Y4B6 1507 aa26.71■■□□□ 1.87
PRDM8-201ENST00000339711 SCRIBQ14160 1630 aa26.66■■□□□ 1.86
PRDM8-201ENST00000339711 EHMT2Q96KQ7 1210 aa26.66■■□□□ 1.86
PRDM8-201ENST00000339711 TRIM41Q8WV44 630 aa26.63■■□□□ 1.85
PRDM8-201ENST00000339711 FAM9AQ8IZU1 332 aaPredicted RBP26.61■■□□□ 1.85
PRDM8-201ENST00000339711 PABPN1Q86U42 306 aaKnown RBP eCLIP26.49■■□□□ 1.83
PRDM8-201ENST00000339711 NACADO15069 1562 aa26.37■■□□□ 1.81
PRDM8-201ENST00000339711 RB1CC1Q8TDY2 1594 aa26.24■■□□□ 1.79
PRDM8-201ENST00000339711 LOC105371045A0A1W2PR82 267 aa26.15■■□□□ 1.78
PRDM8-201ENST00000339711 PCGF6Q9BYE7 350 aa26.12■■□□□ 1.77
PRDM8-201ENST00000339711 MYO15BQ96JP2 1530 aa26.11■■□□□ 1.77
PRDM8-201ENST00000339711 RSF1Q96T23 1441 aaPredicted RBP26.07■■□□□ 1.76
PRDM8-201ENST00000339711 CECR2Q9BXF3 1484 aa25.85■■□□□ 1.73
PRDM8-201ENST00000339711 UBTFP17480 764 aaKnown RBP25.77■■□□□ 1.72
PRDM8-201ENST00000339711 TTBK1Q5TCY1 1321 aaPredicted RBP25.69■■□□□ 1.7
PRDM8-201ENST00000339711 RANGAP1P46060 587 aaPredicted RBP25.62■■□□□ 1.69
PRDM8-201ENST00000339711 APLP2Q06481 763 aa25.6■■□□□ 1.69
PRDM8-201ENST00000339711 MROH2BQ7Z745 1585 aa25.59■■□□□ 1.69
PRDM8-201ENST00000339711 BAZ1AQ9NRL2 1556 aaPredicted RBP25.58■■□□□ 1.69
PRDM8-201ENST00000339711 PPARGC1BQ86YN6 1023 aaKnown RBP25.49■■□□□ 1.67
PRDM8-201ENST00000339711 TRIM26Q12899 539 aaPredicted RBP25.48■■□□□ 1.67
PRDM8-201ENST00000339711 WIZO95785 1651 aa25.29■■□□□ 1.64
PRDM8-201ENST00000339711 CSRNP3Q8WYN3 585 aa25.23■■□□□ 1.63
PRDM8-201ENST00000339711 BAZ1BQ9UIG0 1483 aaKnown RBP25.19■■□□□ 1.62
PRDM8-201ENST00000339711 HRCP23327 699 aa25.18■■□□□ 1.62
PRDM8-201ENST00000339711 CCDC88BA6NC98 1476 aa25.11■■□□□ 1.61
PRDM8-201ENST00000339711 SMARCA4P51532 1647 aa25.09■■□□□ 1.61
PRDM8-201ENST00000339711 ZEB1P37275 1124 aaPredicted RBP25.08■■□□□ 1.61
PRDM8-201ENST00000339711 CCER1Q8TC90 406 aaPredicted RBP25.07■■□□□ 1.6
PRDM8-201ENST00000339711 TOP2AP11388 1531 aaKnown RBP25.04■■□□□ 1.6
PRDM8-201ENST00000339711 ATP1B4Q9UN42 357 aaPredicted RBP25.03■■□□□ 1.6
PRDM8-201ENST00000339711 WRNQ14191 1432 aaPredicted RBP eCLIP24.95■■□□□ 1.59
PRDM8-201ENST00000339711 SMARCA2P51531 1590 aa24.9■■□□□ 1.58
PRDM8-201ENST00000339711 ATAD2BQ9ULI0 1458 aa24.88■■□□□ 1.57
PRDM8-201ENST00000339711 ABCC8Q09428 1581 aa24.83■■□□□ 1.57
PRDM8-201ENST00000339711 EEA1Q15075 1411 aa24.78■■□□□ 1.56
PRDM8-201ENST00000339711 SOGA1O94964 1423 aa24.73■■□□□ 1.55
PRDM8-201ENST00000339711 HNRNPUL2Q1KMD3 747 aaKnown RBP24.72■■□□□ 1.55
PRDM8-201ENST00000339711 BICRAQ9NZM4 1560 aa24.71■■□□□ 1.55
PRDM8-201ENST00000339711 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.67■■□□□ 1.54
PRDM8-201ENST00000339711 YTHDC1Q96MU7 727 aaKnown RBP24.61■■□□□ 1.53
PRDM8-201ENST00000339711 UNC13AQ9UPW8 1703 aa24.59■■□□□ 1.53
PRDM8-201ENST00000339711 GOLGA3Q08378 1498 aa24.59■■□□□ 1.53
PRDM8-201ENST00000339711 CEP162Q5TB80 1403 aa24.59■■□□□ 1.53
PRDM8-201ENST00000339711 TNIKQ9UKE5 1360 aa24.56■■□□□ 1.52
PRDM8-201ENST00000339711 ITGAEP38570 1179 aa24.56■■□□□ 1.52
PRDM8-201ENST00000339711 CENPBP07199 599 aaPredicted RBP24.54■■□□□ 1.52
PRDM8-201ENST00000339711 CLIP1P30622 1438 aa24.49■■□□□ 1.51
PRDM8-201ENST00000339711 CEP164Q9UPV0 1460 aa24.48■■□□□ 1.51
PRDM8-201ENST00000339711 EIF4G1Q04637 1599 aaKnown RBP24.47■■□□□ 1.51
PRDM8-201ENST00000339711 P3H3Q8IVL6 736 aa24.46■■□□□ 1.51
PRDM8-201ENST00000339711 KIF27Q86VH2 1401 aa24.45■■□□□ 1.5
PRDM8-201ENST00000339711 NCAPD3P42695 1498 aa24.44■■□□□ 1.5
PRDM8-201ENST00000339711 PELP1Q8IZL8 1130 aaKnown RBP24.39■■□□□ 1.49
PRDM8-201ENST00000339711 RUSC2Q8N2Y8 1516 aa24.37■■□□□ 1.49
PRDM8-201ENST00000339711 CADPSQ9ULU8 1353 aa24.36■■□□□ 1.49
PRDM8-201ENST00000339711 FAM50AQ14320 339 aaKnown RBP24.25■■□□□ 1.47
PRDM8-201ENST00000339711 CUX2O14529 1486 aa24.24■■□□□ 1.47
PRDM8-201ENST00000339711 PEG3Q9GZU2 1588 aa24.22■■□□□ 1.47
PRDM8-201ENST00000339711 FBLN2P98095 1184 aa24.21■■□□□ 1.47
PRDM8-201ENST00000339711 HMGXB3Q12766 1538 aa24.16■■□□□ 1.46
PRDM8-201ENST00000339711 CARMIL1Q5VZK9 1371 aa24.12■■□□□ 1.45
PRDM8-201ENST00000339711 RAPGEF2Q9Y4G8 1499 aa24.1■■□□□ 1.45
PRDM8-201ENST00000339711 SYNJ1O43426 1573 aa24.09■■□□□ 1.45
PRDM8-201ENST00000339711 CFTRP13569 1480 aa24.07■■□□□ 1.44
PRDM8-201ENST00000339711 PDS5BQ9NTI5 1447 aa24.05■■□□□ 1.44
PRDM8-201ENST00000339711 FANCD2Q9BXW9 1451 aa24.04■■□□□ 1.44
PRDM8-201ENST00000339711 ARID3CA6NKF2 412 aa24.02■■□□□ 1.44
PRDM8-201ENST00000339711 VPS8Q8N3P4 1428 aa24.02■■□□□ 1.44
PRDM8-201ENST00000339711 CC2D2AQ9P2K1 1620 aa24.01■■□□□ 1.43
PRDM8-201ENST00000339711 TDRD9Q8NDG6 1382 aaKnown RBP23.93■■□□□ 1.42
PRDM8-201ENST00000339711 DIEXFQ68CQ4 756 aaKnown RBP23.91■■□□□ 1.42
PRDM8-201ENST00000339711 FGD5Q6ZNL6 1462 aa23.88■■□□□ 1.41
PRDM8-201ENST00000339711 TOP2BQ02880 1626 aa23.87■■□□□ 1.41
PRDM8-201ENST00000339711 CHMP7Q8WUX9 453 aaPredicted RBP23.85■■□□□ 1.41
PRDM8-201ENST00000339711 ERCC6Q03468 1493 aa23.84■■□□□ 1.41
PRDM8-201ENST00000339711 IGF1RP08069 1367 aa23.84■■□□□ 1.41
PRDM8-201ENST00000339711 CUX1P39880 1505 aa23.84■■□□□ 1.41
PRDM8-201ENST00000339711 KANK4Q5T7N3 995 aaPredicted RBP23.8■■□□□ 1.4
PRDM8-201ENST00000339711 NESP48681 1621 aa23.8■■□□□ 1.4
PRDM8-201ENST00000339711 MTUS2Q5JR59 1369 aa23.8■■□□□ 1.4
PRDM8-201ENST00000339711 NEUROD1Q13562 356 aa23.8■■□□□ 1.4
PRDM8-201ENST00000339711 KIF21BO75037 1637 aa23.76■■□□□ 1.39
PRDM8-201ENST00000339711 RAD54L2Q9Y4B4 1467 aa23.75■■□□□ 1.39
PRDM8-201ENST00000339711 ZNF316A6NFI3 1004 aaPredicted RBP23.75■■□□□ 1.39
PRDM8-201ENST00000339711 TRIM52Q96A61 297 aa23.75■■□□□ 1.39
PRDM8-201ENST00000339711 CDK11AQ9UQ88 783 aaPredicted RBP23.75■■□□□ 1.39
PRDM8-201ENST00000339711 FHAD1B1AJZ9 1412 aa23.75■■□□□ 1.39
PRDM8-201ENST00000339711 DNAJC5BQ9UF47 199 aa23.72■■□□□ 1.39
PRDM8-201ENST00000339711 PRXQ9BXM0 1461 aa23.68■■□□□ 1.38
PRDM8-201ENST00000339711 NEFLP07196 543 aa23.66■■□□□ 1.38
PRDM8-201ENST00000339711 GTF3C3Q9Y5Q9 886 aa23.63■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 526 ms