RNA–Protein interactions for RNA: ENST00000412661.3

SLC25A48-202, Transcript of solute carrier family 25 member 48, humanhuman

TSL 1 (best) BASIC

Gene SLC25A48, Length 1,148 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC25A48-202ENST00000412661 NISCHQ9Y2I1 1504 aa46.52■■■■■ 5.04
SLC25A48-202ENST00000412661 CCDC180Q9P1Z9 1646 aa41.53■■■■■ 4.24
SLC25A48-202ENST00000412661 ABCC9O60706 1549 aa41.03■■■■■ 4.16
SLC25A48-202ENST00000412661 RB1CC1Q8TDY2 1594 aa39.34■■■■□ 3.89
SLC25A48-202ENST00000412661 NACADO15069 1562 aa39.21■■■■□ 3.87
SLC25A48-202ENST00000412661 DCAF8L2P0C7V8 631 aa39.02■■■■□ 3.84
SLC25A48-202ENST00000412661 MYO15BQ96JP2 1530 aa38.9■■■■□ 3.82
SLC25A48-202ENST00000412661 ZCCHC6Q5VYS8 1495 aaKnown RBP38.66■■■■□ 3.78
SLC25A48-202ENST00000412661 DCAF1Q9Y4B6 1507 aa38.53■■■■□ 3.76
SLC25A48-202ENST00000412661 PABPN1Q86U42 306 aaKnown RBP eCLIP38.28■■■■□ 3.72
SLC25A48-202ENST00000412661 UNC13AQ9UPW8 1703 aa38.25■■■■□ 3.71
SLC25A48-202ENST00000412661 BICRAQ9NZM4 1560 aa38.1■■■■□ 3.69
SLC25A48-202ENST00000412661 DNAJC5BQ9UF47 199 aa38.05■■■■□ 3.68
SLC25A48-202ENST00000412661 SHROOM4Q9ULL8 1493 aa37.84■■■■□ 3.65
SLC25A48-202ENST00000412661 SCRIBQ14160 1630 aa37.8■■■■□ 3.64
SLC25A48-202ENST00000412661 EIF4G1Q04637 1599 aaKnown RBP37.17■■■■□ 3.54
SLC25A48-202ENST00000412661 CC2D2AQ9P2K1 1620 aa37.09■■■■□ 3.53
SLC25A48-202ENST00000412661 CECR2Q9BXF3 1484 aa36.98■■■■□ 3.51
SLC25A48-202ENST00000412661 NCAPD3P42695 1498 aa36.21■■■■□ 3.39
SLC25A48-202ENST00000412661 SMARCA4P51532 1647 aa36.16■■■■□ 3.38
SLC25A48-202ENST00000412661 ATAD2BQ9ULI0 1458 aa36.12■■■■□ 3.37
SLC25A48-202ENST00000412661 BAZ1AQ9NRL2 1556 aaPredicted RBP36.11■■■■□ 3.37
SLC25A48-202ENST00000412661 SMARCA2P51531 1590 aa36.08■■■■□ 3.37
SLC25A48-202ENST00000412661 HMGXB3Q12766 1538 aa35.97■■■■□ 3.35
SLC25A48-202ENST00000412661 PEG3Q9GZU2 1588 aa35.87■■■■□ 3.33
SLC25A48-202ENST00000412661 BAZ1BQ9UIG0 1483 aaKnown RBP35.8■■■■□ 3.32
SLC25A48-202ENST00000412661 MROH2BQ7Z745 1585 aa35.8■■■■□ 3.32
SLC25A48-202ENST00000412661 ERCC6Q03468 1493 aa35.47■■■■□ 3.27
SLC25A48-202ENST00000412661 NESP48681 1621 aa35.35■■■■□ 3.25
SLC25A48-202ENST00000412661 WIZO95785 1651 aa35.33■■■■□ 3.25
SLC25A48-202ENST00000412661 CUX2O14529 1486 aa35.3■■■■□ 3.24
SLC25A48-202ENST00000412661 LAMC3Q9Y6N6 1575 aa35.29■■■■□ 3.24
SLC25A48-202ENST00000412661 RSF1Q96T23 1441 aaPredicted RBP35.28■■■■□ 3.24
SLC25A48-202ENST00000412661 CADPSQ9ULU8 1353 aa35.13■■■■□ 3.21
SLC25A48-202ENST00000412661 PDS5BQ9NTI5 1447 aa35.12■■■■□ 3.21
SLC25A48-202ENST00000412661 TOP2AP11388 1531 aaKnown RBP35.03■■■■□ 3.2
SLC25A48-202ENST00000412661 THOC2Q8NI27 1593 aaKnown RBP34.93■■■■□ 3.18
SLC25A48-202ENST00000412661 KIF21AQ7Z4S6 1674 aa34.87■■■■□ 3.17
SLC25A48-202ENST00000412661 CFTRP13569 1480 aa34.81■■■■□ 3.16
SLC25A48-202ENST00000412661 MRC2Q9UBG0 1479 aa34.74■■■■□ 3.15
SLC25A48-202ENST00000412661 DNAJC5Q9H3Z4 198 aa34.72■■■■□ 3.15
SLC25A48-202ENST00000412661 CEP164Q9UPV0 1460 aa34.7■■■■□ 3.15
SLC25A48-202ENST00000412661 FANCD2Q9BXW9 1451 aa34.69■■■■□ 3.14
SLC25A48-202ENST00000412661 WDR62O43379 1518 aa34.63■■■■□ 3.13
SLC25A48-202ENST00000412661 CCDC88BA6NC98 1476 aa34.6■■■■□ 3.13
SLC25A48-202ENST00000412661 PRDM2Q13029 1718 aa34.36■■■■□ 3.09
SLC25A48-202ENST00000412661 URB2Q14146 1524 aaKnown RBP34.33■■■■□ 3.09
SLC25A48-202ENST00000412661 ABCC8Q09428 1581 aa34.12■■■■□ 3.05
SLC25A48-202ENST00000412661 TOPBP1Q92547 1522 aa34.06■■■■□ 3.04
SLC25A48-202ENST00000412661 IFT140Q96RY7 1462 aa34.01■■■■□ 3.04
SLC25A48-202ENST00000412661 SUPT5HO00267 1087 aaKnown RBP34.01■■■■□ 3.03
SLC25A48-202ENST00000412661 DNMBPQ6XZF7 1577 aa33.99■■■■□ 3.03
SLC25A48-202ENST00000412661 ZNF608Q9ULD9 1512 aaPredicted RBP33.81■■■■□ 3
SLC25A48-202ENST00000412661 OSCARQ8IYS5 282 aa33.76■■■□□ 2.99
SLC25A48-202ENST00000412661 POLA1P09884 1462 aaPredicted RBP33.76■■■□□ 2.99
SLC25A48-202ENST00000412661 TARBP1Q13395 1621 aaKnown RBP33.69■■■□□ 2.98
SLC25A48-202ENST00000412661 EIF4G3O43432 1585 aaKnown RBP33.65■■■□□ 2.98
SLC25A48-202ENST00000412661 SOGA1O94964 1423 aa33.63■■■□□ 2.97
SLC25A48-202ENST00000412661 CUX1P39880 1505 aa33.61■■■□□ 2.97
SLC25A48-202ENST00000412661 FGD5Q6ZNL6 1462 aa33.6■■■□□ 2.97
SLC25A48-202ENST00000412661 AQRO60306 1485 aaKnown RBP eCLIP33.58■■■□□ 2.97
SLC25A48-202ENST00000412661 RAD54L2Q9Y4B4 1467 aa33.57■■■□□ 2.97
SLC25A48-202ENST00000412661 WDR97A6NE52 1622 aa33.5■■■□□ 2.95
SLC25A48-202ENST00000412661 TDRD9Q8NDG6 1382 aaKnown RBP33.47■■■□□ 2.95
SLC25A48-202ENST00000412661 TRIM41Q8WV44 630 aa33.31■■■□□ 2.92
SLC25A48-202ENST00000412661 GRIN2BQ13224 1484 aa33.31■■■□□ 2.92
SLC25A48-202ENST00000412661 WRNQ14191 1432 aaPredicted RBP eCLIP33.3■■■□□ 2.92
SLC25A48-202ENST00000412661 FBLN2P98095 1184 aa33.29■■■□□ 2.92
SLC25A48-202ENST00000412661 ABCA10Q8WWZ4 1543 aa33.28■■■□□ 2.92
SLC25A48-202ENST00000412661 MAGI1Q96QZ7 1491 aaPredicted RBP33.28■■■□□ 2.92
SLC25A48-202ENST00000412661 SNAPC4Q5SXM2 1469 aa33.27■■■□□ 2.92
SLC25A48-202ENST00000412661 CHD1O14646 1710 aa33.24■■■□□ 2.91
SLC25A48-202ENST00000412661 TOP2BQ02880 1626 aa33.23■■■□□ 2.91
SLC25A48-202ENST00000412661 GAPVD1Q14C86 1478 aa33.23■■■□□ 2.91
SLC25A48-202ENST00000412661 BIVM-ERCC5R4GMW8 1640 aa33.2■■■□□ 2.91
SLC25A48-202ENST00000412661 CHMP7Q8WUX9 453 aaPredicted RBP33.18■■■□□ 2.9
SLC25A48-202ENST00000412661 RIMBP3CA6NJZ7 1639 aa33.14■■■□□ 2.9
SLC25A48-202ENST00000412661 RIMBP3BA6NNM3 1639 aa33.14■■■□□ 2.9
SLC25A48-202ENST00000412661 RIMBP3Q9UFD9 1639 aa33.14■■■□□ 2.9
SLC25A48-202ENST00000412661 SYNJ1O43426 1573 aa33.14■■■□□ 2.9
SLC25A48-202ENST00000412661 ARHGEF11O15085 1522 aa33.14■■■□□ 2.9
SLC25A48-202ENST00000412661 SYNJ2O15056 1496 aa33.14■■■□□ 2.9
SLC25A48-202ENST00000412661 ABCA5Q8WWZ7 1642 aa33.13■■■□□ 2.89
SLC25A48-202ENST00000412661 PBRM1Q86U86 1689 aa33.07■■■□□ 2.88
SLC25A48-202ENST00000412661 CLASP1Q7Z460 1538 aa32.97■■■□□ 2.87
SLC25A48-202ENST00000412661 ERICH3Q5RHP9 1530 aa32.88■■■□□ 2.85
SLC25A48-202ENST00000412661 CYB5RLQ6IPT4 315 aa32.87■■■□□ 2.85
SLC25A48-202ENST00000412661 FHAD1B1AJZ9 1412 aa32.86■■■□□ 2.85
SLC25A48-202ENST00000412661 ADAMTS12P58397 1594 aa32.86■■■□□ 2.85
SLC25A48-202ENST00000412661 GRIN2AQ12879 1464 aa32.86■■■□□ 2.85
SLC25A48-202ENST00000412661 ARAP1Q96P48 1450 aa32.84■■■□□ 2.85
SLC25A48-202ENST00000412661 NUP160Q12769 1436 aa32.75■■■□□ 2.83
SLC25A48-202ENST00000412661 KIF27Q86VH2 1401 aa32.67■■■□□ 2.82
SLC25A48-202ENST00000412661 CEP170Q5SW79 1584 aa32.65■■■□□ 2.82
SLC25A48-202ENST00000412661 IGF1RP08069 1367 aa32.56■■■□□ 2.8
SLC25A48-202ENST00000412661 SHROOM2Q13796 1616 aa32.49■■■□□ 2.79
SLC25A48-202ENST00000412661 CUL7Q14999 1698 aa32.46■■■□□ 2.79
SLC25A48-202ENST00000412661 JPH4Q96JJ6 628 aa32.41■■■□□ 2.78
SLC25A48-202ENST00000412661 ERCC6L2Q5T890 1561 aa32.41■■■□□ 2.78
SLC25A48-202ENST00000412661 RUSC2Q8N2Y8 1516 aa32.37■■■□□ 2.77
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms