RNA–Protein interactions for RNA: ENST00000398014.6

NIPA2-204, Transcript of NIPA magnesium transporter 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NIPA2, Length 3,130 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPA2-204ENST00000398014 NISCHQ9Y2I1 1504 aa33.24■■■□□ 2.91
NIPA2-204ENST00000398014 SHROOM4Q9ULL8 1493 aa28.66■■■□□ 2.18
NIPA2-204ENST00000398014 SUPT5HO00267 1087 aaKnown RBP28.12■■■□□ 2.09
NIPA2-204ENST00000398014 ZCCHC6Q5VYS8 1495 aaKnown RBP28.12■■■□□ 2.09
NIPA2-204ENST00000398014 CCDC180Q9P1Z9 1646 aa28.07■■■□□ 2.08
NIPA2-204ENST00000398014 DCAF8L2P0C7V8 631 aa27.77■■■□□ 2.04
NIPA2-204ENST00000398014 CHIC1Q5VXU3 224 aa27.32■■□□□ 1.96
NIPA2-204ENST00000398014 MYO15BQ96JP2 1530 aa27.3■■□□□ 1.96
NIPA2-204ENST00000398014 HRCP23327 699 aa27.3■■□□□ 1.96
NIPA2-204ENST00000398014 PPARGC1BQ86YN6 1023 aaKnown RBP27.27■■□□□ 1.96
NIPA2-204ENST00000398014 DCAF1Q9Y4B6 1507 aa27.13■■□□□ 1.93
NIPA2-204ENST00000398014 PCGF6Q9BYE7 350 aa27.1■■□□□ 1.93
NIPA2-204ENST00000398014 LOC105371045A0A1W2PR82 267 aa26.64■■□□□ 1.86
NIPA2-204ENST00000398014 SCRIBQ14160 1630 aa26.54■■□□□ 1.84
NIPA2-204ENST00000398014 ABCC9O60706 1549 aa26.53■■□□□ 1.84
NIPA2-204ENST00000398014 RSF1Q96T23 1441 aaPredicted RBP26.41■■□□□ 1.82
NIPA2-204ENST00000398014 RB1CC1Q8TDY2 1594 aa26.16■■□□□ 1.78
NIPA2-204ENST00000398014 PELP1Q8IZL8 1130 aaKnown RBP26.15■■□□□ 1.78
NIPA2-204ENST00000398014 SCAF1Q9H7N4 1312 aaKnown RBP26.1■■□□□ 1.77
NIPA2-204ENST00000398014 TRIM41Q8WV44 630 aa26.08■■□□□ 1.77
NIPA2-204ENST00000398014 CECR2Q9BXF3 1484 aa26.06■■□□□ 1.76
NIPA2-204ENST00000398014 FAM9AQ8IZU1 332 aaPredicted RBP26.03■■□□□ 1.76
NIPA2-204ENST00000398014 TRIM26Q12899 539 aaPredicted RBP25.97■■□□□ 1.75
NIPA2-204ENST00000398014 NACADO15069 1562 aa25.97■■□□□ 1.75
NIPA2-204ENST00000398014 MROH2BQ7Z745 1585 aa25.93■■□□□ 1.74
NIPA2-204ENST00000398014 EHMT2Q96KQ7 1210 aa25.91■■□□□ 1.74
NIPA2-204ENST00000398014 WIZO95785 1651 aa25.81■■□□□ 1.72
NIPA2-204ENST00000398014 BAZ1AQ9NRL2 1556 aaPredicted RBP25.52■■□□□ 1.68
NIPA2-204ENST00000398014 EIF4G1Q04637 1599 aaKnown RBP25.41■■□□□ 1.66
NIPA2-204ENST00000398014 NEUROD1Q13562 356 aa25.39■■□□□ 1.66
NIPA2-204ENST00000398014 ZEB1P37275 1124 aaPredicted RBP25.35■■□□□ 1.65
NIPA2-204ENST00000398014 ABCC8Q09428 1581 aa25.31■■□□□ 1.64
NIPA2-204ENST00000398014 GTF3C3Q9Y5Q9 886 aa25.3■■□□□ 1.64
NIPA2-204ENST00000398014 SMARCA4P51532 1647 aa25.29■■□□□ 1.64
NIPA2-204ENST00000398014 UNC13AQ9UPW8 1703 aa25.29■■□□□ 1.64
NIPA2-204ENST00000398014 CCDC88BA6NC98 1476 aa25.28■■□□□ 1.64
NIPA2-204ENST00000398014 TOP2AP11388 1531 aaKnown RBP25.28■■□□□ 1.64
NIPA2-204ENST00000398014 ACIN1Q9UKV3 1341 aaKnown RBP25.26■■□□□ 1.63
NIPA2-204ENST00000398014 SMARCA2P51531 1590 aa25.2■■□□□ 1.62
NIPA2-204ENST00000398014 PABPN1Q86U42 306 aaKnown RBP eCLIP25.16■■□□□ 1.62
NIPA2-204ENST00000398014 SOGA1O94964 1423 aa25.09■■□□□ 1.61
NIPA2-204ENST00000398014 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.09■■□□□ 1.61
NIPA2-204ENST00000398014 TTBK1Q5TCY1 1321 aaPredicted RBP25.06■■□□□ 1.6
NIPA2-204ENST00000398014 RUSC2Q8N2Y8 1516 aa25.01■■□□□ 1.59
NIPA2-204ENST00000398014 MYT1Q01538 1121 aa24.98■■□□□ 1.59
NIPA2-204ENST00000398014 BICRAQ9NZM4 1560 aa24.97■■□□□ 1.59
NIPA2-204ENST00000398014 CEP162Q5TB80 1403 aa24.95■■□□□ 1.58
NIPA2-204ENST00000398014 YTHDC1Q96MU7 727 aaKnown RBP24.95■■□□□ 1.58
NIPA2-204ENST00000398014 CCER1Q8TC90 406 aaPredicted RBP24.92■■□□□ 1.58
NIPA2-204ENST00000398014 CSRNP3Q8WYN3 585 aa24.9■■□□□ 1.58
NIPA2-204ENST00000398014 CENPBP07199 599 aaPredicted RBP24.88■■□□□ 1.57
NIPA2-204ENST00000398014 DIEXFQ68CQ4 756 aaKnown RBP24.88■■□□□ 1.57
NIPA2-204ENST00000398014 WRNQ14191 1432 aaPredicted RBP eCLIP24.86■■□□□ 1.57
NIPA2-204ENST00000398014 UBTFP17480 764 aaKnown RBP24.86■■□□□ 1.57
NIPA2-204ENST00000398014 TNIKQ9UKE5 1360 aa24.85■■□□□ 1.57
NIPA2-204ENST00000398014 EEA1Q15075 1411 aa24.74■■□□□ 1.55
NIPA2-204ENST00000398014 PEG3Q9GZU2 1588 aa24.72■■□□□ 1.55
NIPA2-204ENST00000398014 SYNJ1O43426 1573 aa24.69■■□□□ 1.54
NIPA2-204ENST00000398014 GOLGA3Q08378 1498 aa24.67■■□□□ 1.54
NIPA2-204ENST00000398014 ATAD2BQ9ULI0 1458 aa24.65■■□□□ 1.54
NIPA2-204ENST00000398014 BAZ1BQ9UIG0 1483 aaKnown RBP24.56■■□□□ 1.52
NIPA2-204ENST00000398014 CEP164Q9UPV0 1460 aa24.51■■□□□ 1.51
NIPA2-204ENST00000398014 RANGAP1P46060 587 aaPredicted RBP24.5■■□□□ 1.51
NIPA2-204ENST00000398014 KIF21BO75037 1637 aa24.46■■□□□ 1.51
NIPA2-204ENST00000398014 CLIP1P30622 1438 aa24.45■■□□□ 1.5
NIPA2-204ENST00000398014 RAPGEF2Q9Y4G8 1499 aa24.44■■□□□ 1.5
NIPA2-204ENST00000398014 HNRNPUL2Q1KMD3 747 aaKnown RBP24.43■■□□□ 1.5
NIPA2-204ENST00000398014 MIER1Q8N108 512 aa24.32■■□□□ 1.48
NIPA2-204ENST00000398014 VPS8Q8N3P4 1428 aa24.32■■□□□ 1.48
NIPA2-204ENST00000398014 TOP2BQ02880 1626 aa24.29■■□□□ 1.48
NIPA2-204ENST00000398014 ZNF316A6NFI3 1004 aaPredicted RBP24.23■■□□□ 1.47
NIPA2-204ENST00000398014 APLP2Q06481 763 aa24.22■■□□□ 1.47
NIPA2-204ENST00000398014 BIVM-ERCC5R4GMW8 1640 aa24.17■■□□□ 1.46
NIPA2-204ENST00000398014 CUX1P39880 1505 aa24.11■■□□□ 1.45
NIPA2-204ENST00000398014 PRXQ9BXM0 1461 aa24.11■■□□□ 1.45
NIPA2-204ENST00000398014 NCAPD3P42695 1498 aa24.09■■□□□ 1.45
NIPA2-204ENST00000398014 KANK4Q5T7N3 995 aaPredicted RBP24.07■■□□□ 1.44
NIPA2-204ENST00000398014 ARAP1Q96P48 1450 aa24.07■■□□□ 1.44
NIPA2-204ENST00000398014 HMGXB3Q12766 1538 aa24.04■■□□□ 1.44
NIPA2-204ENST00000398014 ERICH3Q5RHP9 1530 aa24.03■■□□□ 1.44
NIPA2-204ENST00000398014 BCL11AQ9H165 835 aa24.02■■□□□ 1.44
NIPA2-204ENST00000398014 CFTRP13569 1480 aa23.96■■□□□ 1.43
NIPA2-204ENST00000398014 KIF27Q86VH2 1401 aa23.95■■□□□ 1.42
NIPA2-204ENST00000398014 SUPT16HQ9Y5B9 1047 aaKnown RBP23.88■■□□□ 1.41
NIPA2-204ENST00000398014 DHX57Q6P158 1386 aaKnown RBP23.87■■□□□ 1.41
NIPA2-204ENST00000398014 ARHGAP35Q9NRY4 1499 aa23.84■■□□□ 1.41
NIPA2-204ENST00000398014 BCANQ96GW7 911 aa23.84■■□□□ 1.41
NIPA2-204ENST00000398014 ANP32EQ9BTT0 268 aa23.83■■□□□ 1.41
NIPA2-204ENST00000398014 TSHZ2Q9NRE2 1034 aa23.82■■□□□ 1.4
NIPA2-204ENST00000398014 ITGAEP38570 1179 aa23.77■■□□□ 1.4
NIPA2-204ENST00000398014 CUX2O14529 1486 aa23.77■■□□□ 1.4
NIPA2-204ENST00000398014 IGF1RP08069 1367 aa23.77■■□□□ 1.4
NIPA2-204ENST00000398014 RRBP1Q9P2E9 1410 aaKnown RBP23.76■■□□□ 1.39
NIPA2-204ENST00000398014 CCNB3Q8WWL7 1395 aa23.69■■□□□ 1.38
NIPA2-204ENST00000398014 CLSPNQ9HAW4 1339 aa23.69■■□□□ 1.38
NIPA2-204ENST00000398014 CADPSQ9ULU8 1353 aa23.69■■□□□ 1.38
NIPA2-204ENST00000398014 PRDM2Q13029 1718 aa23.66■■□□□ 1.38
NIPA2-204ENST00000398014 FGD5Q6ZNL6 1462 aa23.65■■□□□ 1.38
NIPA2-204ENST00000398014 CARMIL1Q5VZK9 1371 aa23.65■■□□□ 1.38
NIPA2-204ENST00000398014 P3H3Q8IVL6 736 aa23.6■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms