RNA–Protein interactions for RNA: ENST00000428088.1

AL954642.1-201, humanhuman

TSL 3 BASIC

Gene AL954642.1, Length 538 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL954642.1-201ENST00000428088 NISCHQ9Y2I1 1504 aa47.25■■■■■ 5.15
AL954642.1-201ENST00000428088 CCDC180Q9P1Z9 1646 aa42.22■■■■■ 4.35
AL954642.1-201ENST00000428088 ABCC9O60706 1549 aa41.95■■■■■ 4.31
AL954642.1-201ENST00000428088 RB1CC1Q8TDY2 1594 aa40.03■■■■■ 4
AL954642.1-201ENST00000428088 DCAF8L2P0C7V8 631 aa39.84■■■■□ 3.97
AL954642.1-201ENST00000428088 NACADO15069 1562 aa39.84■■■■□ 3.97
AL954642.1-201ENST00000428088 MYO15BQ96JP2 1530 aa39.37■■■■□ 3.89
AL954642.1-201ENST00000428088 ZCCHC6Q5VYS8 1495 aaKnown RBP39.22■■■■□ 3.87
AL954642.1-201ENST00000428088 UNC13AQ9UPW8 1703 aa39.2■■■■□ 3.87
AL954642.1-201ENST00000428088 PABPN1Q86U42 306 aaKnown RBP eCLIP39.15■■■■□ 3.86
AL954642.1-201ENST00000428088 DNAJC5BQ9UF47 199 aa39.07■■■■□ 3.85
AL954642.1-201ENST00000428088 DCAF1Q9Y4B6 1507 aa39■■■■□ 3.83
AL954642.1-201ENST00000428088 BICRAQ9NZM4 1560 aa38.87■■■■□ 3.81
AL954642.1-201ENST00000428088 SCRIBQ14160 1630 aa38.56■■■■□ 3.76
AL954642.1-201ENST00000428088 SHROOM4Q9ULL8 1493 aa38.29■■■■□ 3.72
AL954642.1-201ENST00000428088 CC2D2AQ9P2K1 1620 aa37.9■■■■□ 3.66
AL954642.1-201ENST00000428088 EIF4G1Q04637 1599 aaKnown RBP37.89■■■■□ 3.66
AL954642.1-201ENST00000428088 CECR2Q9BXF3 1484 aa37.73■■■■□ 3.63
AL954642.1-201ENST00000428088 SMARCA4P51532 1647 aa36.79■■■■□ 3.48
AL954642.1-201ENST00000428088 NCAPD3P42695 1498 aa36.77■■■■□ 3.48
AL954642.1-201ENST00000428088 ATAD2BQ9ULI0 1458 aa36.74■■■■□ 3.47
AL954642.1-201ENST00000428088 BAZ1AQ9NRL2 1556 aaPredicted RBP36.64■■■■□ 3.46
AL954642.1-201ENST00000428088 SMARCA2P51531 1590 aa36.63■■■■□ 3.45
AL954642.1-201ENST00000428088 HMGXB3Q12766 1538 aa36.52■■■■□ 3.44
AL954642.1-201ENST00000428088 MROH2BQ7Z745 1585 aa36.43■■■■□ 3.42
AL954642.1-201ENST00000428088 BAZ1BQ9UIG0 1483 aaKnown RBP36.4■■■■□ 3.42
AL954642.1-201ENST00000428088 PEG3Q9GZU2 1588 aa36.4■■■■□ 3.42
AL954642.1-201ENST00000428088 ERCC6Q03468 1493 aa36.18■■■■□ 3.38
AL954642.1-201ENST00000428088 NESP48681 1621 aa36.14■■■■□ 3.38
AL954642.1-201ENST00000428088 WIZO95785 1651 aa36.03■■■■□ 3.36
AL954642.1-201ENST00000428088 CUX2O14529 1486 aa35.95■■■■□ 3.35
AL954642.1-201ENST00000428088 LAMC3Q9Y6N6 1575 aa35.89■■■■□ 3.34
AL954642.1-201ENST00000428088 RSF1Q96T23 1441 aaPredicted RBP35.8■■■■□ 3.32
AL954642.1-201ENST00000428088 KIF21AQ7Z4S6 1674 aa35.69■■■■□ 3.3
AL954642.1-201ENST00000428088 CADPSQ9ULU8 1353 aa35.69■■■■□ 3.3
AL954642.1-201ENST00000428088 PDS5BQ9NTI5 1447 aa35.68■■■■□ 3.3
AL954642.1-201ENST00000428088 THOC2Q8NI27 1593 aaKnown RBP35.66■■■■□ 3.3
AL954642.1-201ENST00000428088 DNAJC5Q9H3Z4 198 aa35.58■■■■□ 3.29
AL954642.1-201ENST00000428088 TOP2AP11388 1531 aaKnown RBP35.56■■■■□ 3.28
AL954642.1-201ENST00000428088 MRC2Q9UBG0 1479 aa35.35■■■■□ 3.25
AL954642.1-201ENST00000428088 CFTRP13569 1480 aa35.35■■■■□ 3.25
AL954642.1-201ENST00000428088 FANCD2Q9BXW9 1451 aa35.29■■■■□ 3.24
AL954642.1-201ENST00000428088 CEP164Q9UPV0 1460 aa35.29■■■■□ 3.24
AL954642.1-201ENST00000428088 WDR62O43379 1518 aa35.25■■■■□ 3.23
AL954642.1-201ENST00000428088 CCDC88BA6NC98 1476 aa35.19■■■■□ 3.22
AL954642.1-201ENST00000428088 PRDM2Q13029 1718 aa35.05■■■■□ 3.2
AL954642.1-201ENST00000428088 URB2Q14146 1524 aaKnown RBP34.98■■■■□ 3.19
AL954642.1-201ENST00000428088 TOPBP1Q92547 1522 aa34.66■■■■□ 3.14
AL954642.1-201ENST00000428088 ABCC8Q09428 1581 aa34.58■■■■□ 3.13
AL954642.1-201ENST00000428088 IFT140Q96RY7 1462 aa34.56■■■■□ 3.12
AL954642.1-201ENST00000428088 DNMBPQ6XZF7 1577 aa34.56■■■■□ 3.12
AL954642.1-201ENST00000428088 SUPT5HO00267 1087 aaKnown RBP34.55■■■■□ 3.12
AL954642.1-201ENST00000428088 ZNF608Q9ULD9 1512 aaPredicted RBP34.51■■■■□ 3.12
AL954642.1-201ENST00000428088 OSCARQ8IYS5 282 aa34.42■■■■□ 3.1
AL954642.1-201ENST00000428088 POLA1P09884 1462 aaPredicted RBP34.33■■■■□ 3.09
AL954642.1-201ENST00000428088 TARBP1Q13395 1621 aaKnown RBP34.33■■■■□ 3.09
AL954642.1-201ENST00000428088 EIF4G3O43432 1585 aaKnown RBP34.32■■■■□ 3.08
AL954642.1-201ENST00000428088 AQRO60306 1485 aaKnown RBP eCLIP34.26■■■■□ 3.07
AL954642.1-201ENST00000428088 RAD54L2Q9Y4B4 1467 aa34.23■■■■□ 3.07
AL954642.1-201ENST00000428088 TRIM41Q8WV44 630 aa34.22■■■■□ 3.07
AL954642.1-201ENST00000428088 SOGA1O94964 1423 aa34.21■■■■□ 3.07
AL954642.1-201ENST00000428088 CUX1P39880 1505 aa34.2■■■■□ 3.07
AL954642.1-201ENST00000428088 FGD5Q6ZNL6 1462 aa34.18■■■■□ 3.06
AL954642.1-201ENST00000428088 TDRD9Q8NDG6 1382 aaKnown RBP34.1■■■■□ 3.05
AL954642.1-201ENST00000428088 CHD1O14646 1710 aa34.03■■■■□ 3.04
AL954642.1-201ENST00000428088 FBLN2P98095 1184 aa33.99■■■■□ 3.03
AL954642.1-201ENST00000428088 WDR97A6NE52 1622 aa33.95■■■■□ 3.03
AL954642.1-201ENST00000428088 RIMBP3CA6NJZ7 1639 aa33.93■■■■□ 3.02
AL954642.1-201ENST00000428088 RIMBP3BA6NNM3 1639 aa33.93■■■■□ 3.02
AL954642.1-201ENST00000428088 RIMBP3Q9UFD9 1639 aa33.93■■■■□ 3.02
AL954642.1-201ENST00000428088 SNAPC4Q5SXM2 1469 aa33.89■■■■□ 3.02
AL954642.1-201ENST00000428088 ARHGEF11O15085 1522 aa33.84■■■■□ 3.01
AL954642.1-201ENST00000428088 GRIN2BQ13224 1484 aa33.83■■■■□ 3.01
AL954642.1-201ENST00000428088 ABCA10Q8WWZ4 1543 aa33.79■■■■□ 3
AL954642.1-201ENST00000428088 MAGI1Q96QZ7 1491 aaPredicted RBP33.79■■■■□ 3
AL954642.1-201ENST00000428088 GAPVD1Q14C86 1478 aa33.78■■■■□ 3
AL954642.1-201ENST00000428088 CHMP7Q8WUX9 453 aaPredicted RBP33.78■■■■□ 3
AL954642.1-201ENST00000428088 PBRM1Q86U86 1689 aa33.76■■■□□ 2.99
AL954642.1-201ENST00000428088 WRNQ14191 1432 aaPredicted RBP eCLIP33.76■■■□□ 2.99
AL954642.1-201ENST00000428088 TOP2BQ02880 1626 aa33.74■■■□□ 2.99
AL954642.1-201ENST00000428088 BIVM-ERCC5R4GMW8 1640 aa33.74■■■□□ 2.99
AL954642.1-201ENST00000428088 SYNJ1O43426 1573 aa33.73■■■□□ 2.99
AL954642.1-201ENST00000428088 ABCA5Q8WWZ7 1642 aa33.71■■■□□ 2.99
AL954642.1-201ENST00000428088 SYNJ2O15056 1496 aa33.68■■■□□ 2.98
AL954642.1-201ENST00000428088 CYB5RLQ6IPT4 315 aa33.63■■■□□ 2.97
AL954642.1-201ENST00000428088 CLASP1Q7Z460 1538 aa33.6■■■□□ 2.97
AL954642.1-201ENST00000428088 ARAP1Q96P48 1450 aa33.54■■■□□ 2.96
AL954642.1-201ENST00000428088 ADAMTS12P58397 1594 aa33.43■■■□□ 2.94
AL954642.1-201ENST00000428088 GRIN2AQ12879 1464 aa33.41■■■□□ 2.94
AL954642.1-201ENST00000428088 ERICH3Q5RHP9 1530 aa33.37■■■□□ 2.93
AL954642.1-201ENST00000428088 FHAD1B1AJZ9 1412 aa33.36■■■□□ 2.93
AL954642.1-201ENST00000428088 CEP170Q5SW79 1584 aa33.28■■■□□ 2.92
AL954642.1-201ENST00000428088 NUP160Q12769 1436 aa33.27■■■□□ 2.92
AL954642.1-201ENST00000428088 ERCC6L2Q5T890 1561 aa33.16■■■□□ 2.9
AL954642.1-201ENST00000428088 TRHP20396 242 aaPredicted RBP33.15■■■□□ 2.9
AL954642.1-201ENST00000428088 KIF27Q86VH2 1401 aa33.1■■■□□ 2.89
AL954642.1-201ENST00000428088 SHROOM2Q13796 1616 aa33.09■■■□□ 2.89
AL954642.1-201ENST00000428088 IGF1RP08069 1367 aa33.06■■■□□ 2.88
AL954642.1-201ENST00000428088 JPH4Q96JJ6 628 aa32.98■■■□□ 2.87
AL954642.1-201ENST00000428088 CUL7Q14999 1698 aa32.96■■■□□ 2.87
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms