RNA–Protein interactions for RNA: ENST00000518537.5

PCM1-206, Transcript of pericentriolar material 1, humanhuman

TSL 1 (best) BASIC

Gene PCM1, Length 2,171 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-206ENST00000518537 NISCHQ9Y2I1 1504 aa36.84■■■■□ 3.49
PCM1-206ENST00000518537 CCDC180Q9P1Z9 1646 aa31.98■■■□□ 2.71
PCM1-206ENST00000518537 ZCCHC6Q5VYS8 1495 aaKnown RBP31■■■□□ 2.55
PCM1-206ENST00000518537 DCAF8L2P0C7V8 631 aa30.48■■■□□ 2.47
PCM1-206ENST00000518537 DCAF1Q9Y4B6 1507 aa30.41■■■□□ 2.46
PCM1-206ENST00000518537 SHROOM4Q9ULL8 1493 aa30.38■■■□□ 2.45
PCM1-206ENST00000518537 ABCC9O60706 1549 aa30.05■■■□□ 2.4
PCM1-206ENST00000518537 MYO15BQ96JP2 1530 aa29.92■■■□□ 2.38
PCM1-206ENST00000518537 NACADO15069 1562 aa29.71■■■□□ 2.35
PCM1-206ENST00000518537 SCRIBQ14160 1630 aa29.52■■■□□ 2.32
PCM1-206ENST00000518537 RB1CC1Q8TDY2 1594 aa29.41■■■□□ 2.3
PCM1-206ENST00000518537 SUPT5HO00267 1087 aaKnown RBP29.38■■■□□ 2.29
PCM1-206ENST00000518537 UNC13AQ9UPW8 1703 aa28.86■■■□□ 2.21
PCM1-206ENST00000518537 RSF1Q96T23 1441 aaPredicted RBP28.7■■■□□ 2.19
PCM1-206ENST00000518537 CECR2Q9BXF3 1484 aa28.63■■■□□ 2.17
PCM1-206ENST00000518537 BICRAQ9NZM4 1560 aa28.51■■■□□ 2.15
PCM1-206ENST00000518537 MROH2BQ7Z745 1585 aa28.5■■■□□ 2.15
PCM1-206ENST00000518537 BAZ1AQ9NRL2 1556 aaPredicted RBP28.43■■■□□ 2.14
PCM1-206ENST00000518537 PABPN1Q86U42 306 aaKnown RBP eCLIP28.42■■■□□ 2.14
PCM1-206ENST00000518537 WIZO95785 1651 aa28.31■■■□□ 2.12
PCM1-206ENST00000518537 SMARCA4P51532 1647 aa28.28■■■□□ 2.12
PCM1-206ENST00000518537 CHIC1Q5VXU3 224 aa28.23■■■□□ 2.11
PCM1-206ENST00000518537 TOP2AP11388 1531 aaKnown RBP27.99■■■□□ 2.07
PCM1-206ENST00000518537 PEG3Q9GZU2 1588 aa27.86■■■□□ 2.05
PCM1-206ENST00000518537 SMARCA2P51531 1590 aa27.74■■■□□ 2.03
PCM1-206ENST00000518537 CCDC88BA6NC98 1476 aa27.72■■■□□ 2.03
PCM1-206ENST00000518537 ATAD2BQ9ULI0 1458 aa27.72■■■□□ 2.03
PCM1-206ENST00000518537 EIF4G1Q04637 1599 aaKnown RBP27.64■■■□□ 2.01
PCM1-206ENST00000518537 BAZ1BQ9UIG0 1483 aaKnown RBP27.62■■■□□ 2.01
PCM1-206ENST00000518537 TRIM41Q8WV44 630 aa27.58■■■□□ 2
PCM1-206ENST00000518537 NCAPD3P42695 1498 aa27.41■■□□□ 1.98
PCM1-206ENST00000518537 HMGXB3Q12766 1538 aa27.4■■□□□ 1.98
PCM1-206ENST00000518537 ABCC8Q09428 1581 aa27.27■■□□□ 1.96
PCM1-206ENST00000518537 LOC105371045A0A1W2PR82 267 aa27.2■■□□□ 1.94
PCM1-206ENST00000518537 CC2D2AQ9P2K1 1620 aa27.17■■□□□ 1.94
PCM1-206ENST00000518537 FAM9AQ8IZU1 332 aaPredicted RBP27.14■■□□□ 1.93
PCM1-206ENST00000518537 WRNQ14191 1432 aaPredicted RBP eCLIP27.03■■□□□ 1.92
PCM1-206ENST00000518537 SYNJ1O43426 1573 aa26.91■■□□□ 1.9
PCM1-206ENST00000518537 CFTRP13569 1480 aa26.89■■□□□ 1.9
PCM1-206ENST00000518537 PRDM2Q13029 1718 aa26.81■■□□□ 1.88
PCM1-206ENST00000518537 SOGA1O94964 1423 aa26.8■■□□□ 1.88
PCM1-206ENST00000518537 EHMT2Q96KQ7 1210 aa26.78■■□□□ 1.88
PCM1-206ENST00000518537 EEA1Q15075 1411 aa26.78■■□□□ 1.88
PCM1-206ENST00000518537 CADPSQ9ULU8 1353 aa26.76■■□□□ 1.87
PCM1-206ENST00000518537 TOP2BQ02880 1626 aa26.76■■□□□ 1.87
PCM1-206ENST00000518537 BIVM-ERCC5R4GMW8 1640 aa26.73■■□□□ 1.87
PCM1-206ENST00000518537 RUSC2Q8N2Y8 1516 aa26.69■■□□□ 1.86
PCM1-206ENST00000518537 CSRNP3Q8WYN3 585 aa26.64■■□□□ 1.86
PCM1-206ENST00000518537 CUX1P39880 1505 aa26.63■■□□□ 1.85
PCM1-206ENST00000518537 FANCD2Q9BXW9 1451 aa26.49■■□□□ 1.83
PCM1-206ENST00000518537 NESP48681 1621 aa26.47■■□□□ 1.83
PCM1-206ENST00000518537 LAMC3Q9Y6N6 1575 aa26.46■■□□□ 1.83
PCM1-206ENST00000518537 GOLGA3Q08378 1498 aa26.45■■□□□ 1.82
PCM1-206ENST00000518537 KIF21BO75037 1637 aa26.42■■□□□ 1.82
PCM1-206ENST00000518537 CEP164Q9UPV0 1460 aa26.42■■□□□ 1.82
PCM1-206ENST00000518537 TNIKQ9UKE5 1360 aa26.41■■□□□ 1.82
PCM1-206ENST00000518537 DNAJC5BQ9UF47 199 aa26.41■■□□□ 1.82
PCM1-206ENST00000518537 UBTFP17480 764 aaKnown RBP26.38■■□□□ 1.81
PCM1-206ENST00000518537 KIF27Q86VH2 1401 aa26.32■■□□□ 1.8
PCM1-206ENST00000518537 CEP162Q5TB80 1403 aa26.31■■□□□ 1.8
PCM1-206ENST00000518537 FGD5Q6ZNL6 1462 aa26.3■■□□□ 1.8
PCM1-206ENST00000518537 DNMBPQ6XZF7 1577 aa26.29■■□□□ 1.8
PCM1-206ENST00000518537 PCGF6Q9BYE7 350 aa26.28■■□□□ 1.8
PCM1-206ENST00000518537 PDS5BQ9NTI5 1447 aa26.26■■□□□ 1.79
PCM1-206ENST00000518537 RAPGEF2Q9Y4G8 1499 aa26.23■■□□□ 1.79
PCM1-206ENST00000518537 TOPBP1Q92547 1522 aa26.23■■□□□ 1.79
PCM1-206ENST00000518537 CUX2O14529 1486 aa26.2■■□□□ 1.79
PCM1-206ENST00000518537 PRXQ9BXM0 1461 aa26.18■■□□□ 1.78
PCM1-206ENST00000518537 TRIM26Q12899 539 aaPredicted RBP26.18■■□□□ 1.78
PCM1-206ENST00000518537 ERICH3Q5RHP9 1530 aa26.18■■□□□ 1.78
PCM1-206ENST00000518537 KIF21AQ7Z4S6 1674 aa26.15■■□□□ 1.78
PCM1-206ENST00000518537 URB2Q14146 1524 aaKnown RBP26.13■■□□□ 1.77
PCM1-206ENST00000518537 POLA1P09884 1462 aaPredicted RBP26.12■■□□□ 1.77
PCM1-206ENST00000518537 RAD54L2Q9Y4B4 1467 aa26.07■■□□□ 1.76
PCM1-206ENST00000518537 CLIP1P30622 1438 aa26.05■■□□□ 1.76
PCM1-206ENST00000518537 ABCA10Q8WWZ4 1543 aa26.04■■□□□ 1.76
PCM1-206ENST00000518537 IGF1RP08069 1367 aa26.04■■□□□ 1.76
PCM1-206ENST00000518537 PPARGC1BQ86YN6 1023 aaKnown RBP25.95■■□□□ 1.74
PCM1-206ENST00000518537 WDR97A6NE52 1622 aa25.94■■□□□ 1.74
PCM1-206ENST00000518537 CARMIL1Q5VZK9 1371 aa25.94■■□□□ 1.74
PCM1-206ENST00000518537 RANGAP1P46060 587 aaPredicted RBP25.92■■□□□ 1.74
PCM1-206ENST00000518537 MRC2Q9UBG0 1479 aa25.9■■□□□ 1.74
PCM1-206ENST00000518537 VPS8Q8N3P4 1428 aa25.84■■□□□ 1.73
PCM1-206ENST00000518537 CUL7Q14999 1698 aa25.83■■□□□ 1.73
PCM1-206ENST00000518537 ABCA5Q8WWZ7 1642 aa25.82■■□□□ 1.72
PCM1-206ENST00000518537 TARBP1Q13395 1621 aaKnown RBP25.79■■□□□ 1.72
PCM1-206ENST00000518537 TDRD9Q8NDG6 1382 aaKnown RBP25.79■■□□□ 1.72
PCM1-206ENST00000518537 GAPVD1Q14C86 1478 aa25.77■■□□□ 1.72
PCM1-206ENST00000518537 ERCC6Q03468 1493 aa25.74■■□□□ 1.71
PCM1-206ENST00000518537 ARAP1Q96P48 1450 aa25.74■■□□□ 1.71
PCM1-206ENST00000518537 WDR62O43379 1518 aa25.74■■□□□ 1.71
PCM1-206ENST00000518537 HRCP23327 699 aa25.73■■□□□ 1.71
PCM1-206ENST00000518537 TTBK1Q5TCY1 1321 aaPredicted RBP25.71■■□□□ 1.71
PCM1-206ENST00000518537 APLP2Q06481 763 aa25.68■■□□□ 1.7
PCM1-206ENST00000518537 ARHGAP35Q9NRY4 1499 aa25.68■■□□□ 1.7
PCM1-206ENST00000518537 IFT140Q96RY7 1462 aa25.62■■□□□ 1.69
PCM1-206ENST00000518537 PBRM1Q86U86 1689 aa25.62■■□□□ 1.69
PCM1-206ENST00000518537 CTTNBP2Q8WZ74 1663 aa25.61■■□□□ 1.69
PCM1-206ENST00000518537 THOC2Q8NI27 1593 aaKnown RBP25.6■■□□□ 1.69
PCM1-206ENST00000518537 AQRO60306 1485 aaKnown RBP eCLIP25.57■■□□□ 1.689e-9■■■■■ 32.2
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms