RNA–Protein interactions for RNA: ENST00000354884.8

SLC39A13-201, Transcript of solute carrier family 39 member 13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC39A13, Length 2,289 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC39A13-201ENST00000354884 NISCHQ9Y2I1 1504 aa36.76■■■■□ 3.48
SLC39A13-201ENST00000354884 CCDC180Q9P1Z9 1646 aa31.85■■■□□ 2.69
SLC39A13-201ENST00000354884 ZCCHC6Q5VYS8 1495 aaKnown RBP30.94■■■□□ 2.54
SLC39A13-201ENST00000354884 DCAF8L2P0C7V8 631 aa30.36■■■□□ 2.45
SLC39A13-201ENST00000354884 DCAF1Q9Y4B6 1507 aa30.34■■■□□ 2.45
SLC39A13-201ENST00000354884 SHROOM4Q9ULL8 1493 aa30.33■■■□□ 2.45
SLC39A13-201ENST00000354884 ABCC9O60706 1549 aa29.91■■■□□ 2.38
SLC39A13-201ENST00000354884 MYO15BQ96JP2 1530 aa29.84■■■□□ 2.37
SLC39A13-201ENST00000354884 NACADO15069 1562 aa29.59■■■□□ 2.33
SLC39A13-201ENST00000354884 SCRIBQ14160 1630 aa29.42■■■□□ 2.3
SLC39A13-201ENST00000354884 SUPT5HO00267 1087 aaKnown RBP29.36■■■□□ 2.29
SLC39A13-201ENST00000354884 RB1CC1Q8TDY2 1594 aa29.27■■■□□ 2.28
SLC39A13-201ENST00000354884 UNC13AQ9UPW8 1703 aa28.76■■■□□ 2.19
SLC39A13-201ENST00000354884 RSF1Q96T23 1441 aaPredicted RBP28.67■■■□□ 2.18
SLC39A13-201ENST00000354884 CECR2Q9BXF3 1484 aa28.58■■■□□ 2.17
SLC39A13-201ENST00000354884 MROH2BQ7Z745 1585 aa28.45■■■□□ 2.14
SLC39A13-201ENST00000354884 BICRAQ9NZM4 1560 aa28.41■■■□□ 2.14
SLC39A13-201ENST00000354884 BAZ1AQ9NRL2 1556 aaPredicted RBP28.34■■■□□ 2.13
SLC39A13-201ENST00000354884 PABPN1Q86U42 306 aaKnown RBP eCLIP28.3■■■□□ 2.12
SLC39A13-201ENST00000354884 WIZO95785 1651 aa28.25■■■□□ 2.11
SLC39A13-201ENST00000354884 CHIC1Q5VXU3 224 aa28.24■■■□□ 2.11
SLC39A13-201ENST00000354884 SMARCA4P51532 1647 aa28.19■■■□□ 2.1
SLC39A13-201ENST00000354884 TOP2AP11388 1531 aaKnown RBP27.91■■■□□ 2.06
SLC39A13-201ENST00000354884 PEG3Q9GZU2 1588 aa27.8■■■□□ 2.04
SLC39A13-201ENST00000354884 SMARCA2P51531 1590 aa27.68■■■□□ 2.02
SLC39A13-201ENST00000354884 CCDC88BA6NC98 1476 aa27.67■■■□□ 2.02
SLC39A13-201ENST00000354884 ATAD2BQ9ULI0 1458 aa27.65■■■□□ 2.02
SLC39A13-201ENST00000354884 EIF4G1Q04637 1599 aaKnown RBP27.58■■■□□ 2.01
SLC39A13-201ENST00000354884 TRIM41Q8WV44 630 aa27.53■■■□□ 2
SLC39A13-201ENST00000354884 BAZ1BQ9UIG0 1483 aaKnown RBP27.51■■□□□ 1.99
SLC39A13-201ENST00000354884 NCAPD3P42695 1498 aa27.32■■□□□ 1.96
SLC39A13-201ENST00000354884 HMGXB3Q12766 1538 aa27.3■■□□□ 1.96
SLC39A13-201ENST00000354884 LOC105371045A0A1W2PR82 267 aa27.23■■□□□ 1.95
SLC39A13-201ENST00000354884 ABCC8Q09428 1581 aa27.23■■□□□ 1.95
SLC39A13-201ENST00000354884 FAM9AQ8IZU1 332 aaPredicted RBP27.09■■□□□ 1.93
SLC39A13-201ENST00000354884 CC2D2AQ9P2K1 1620 aa27.05■■□□□ 1.92
SLC39A13-201ENST00000354884 WRNQ14191 1432 aaPredicted RBP eCLIP26.97■■□□□ 1.91
SLC39A13-201ENST00000354884 SYNJ1O43426 1573 aa26.86■■□□□ 1.89
SLC39A13-201ENST00000354884 CFTRP13569 1480 aa26.82■■□□□ 1.88
SLC39A13-201ENST00000354884 SOGA1O94964 1423 aa26.78■■□□□ 1.88
SLC39A13-201ENST00000354884 EHMT2Q96KQ7 1210 aa26.74■■□□□ 1.87
SLC39A13-201ENST00000354884 EEA1Q15075 1411 aa26.72■■□□□ 1.87
SLC39A13-201ENST00000354884 PRDM2Q13029 1718 aa26.71■■□□□ 1.87
SLC39A13-201ENST00000354884 TOP2BQ02880 1626 aa26.7■■□□□ 1.86
SLC39A13-201ENST00000354884 RUSC2Q8N2Y8 1516 aa26.68■■□□□ 1.86
SLC39A13-201ENST00000354884 CADPSQ9ULU8 1353 aa26.67■■□□□ 1.86
SLC39A13-201ENST00000354884 BIVM-ERCC5R4GMW8 1640 aa26.66■■□□□ 1.86
SLC39A13-201ENST00000354884 CSRNP3Q8WYN3 585 aa26.6■■□□□ 1.85
SLC39A13-201ENST00000354884 CUX1P39880 1505 aa26.57■■□□□ 1.84
SLC39A13-201ENST00000354884 GOLGA3Q08378 1498 aa26.4■■□□□ 1.82
SLC39A13-201ENST00000354884 TNIKQ9UKE5 1360 aa26.39■■□□□ 1.82
SLC39A13-201ENST00000354884 FANCD2Q9BXW9 1451 aa26.39■■□□□ 1.81
SLC39A13-201ENST00000354884 KIF21BO75037 1637 aa26.38■■□□□ 1.81
SLC39A13-201ENST00000354884 NESP48681 1621 aa26.37■■□□□ 1.81
SLC39A13-201ENST00000354884 CEP164Q9UPV0 1460 aa26.37■■□□□ 1.81
SLC39A13-201ENST00000354884 LAMC3Q9Y6N6 1575 aa26.34■■□□□ 1.81
SLC39A13-201ENST00000354884 PCGF6Q9BYE7 350 aa26.34■■□□□ 1.81
SLC39A13-201ENST00000354884 DNAJC5BQ9UF47 199 aa26.34■■□□□ 1.81
SLC39A13-201ENST00000354884 UBTFP17480 764 aaKnown RBP26.32■■□□□ 1.8
SLC39A13-201ENST00000354884 CEP162Q5TB80 1403 aa26.3■■□□□ 1.8
SLC39A13-201ENST00000354884 KIF27Q86VH2 1401 aa26.25■■□□□ 1.79
SLC39A13-201ENST00000354884 FGD5Q6ZNL6 1462 aa26.22■■□□□ 1.79
SLC39A13-201ENST00000354884 RAPGEF2Q9Y4G8 1499 aa26.21■■□□□ 1.79
SLC39A13-201ENST00000354884 TRIM26Q12899 539 aaPredicted RBP26.2■■□□□ 1.78
SLC39A13-201ENST00000354884 DNMBPQ6XZF7 1577 aa26.2■■□□□ 1.78
SLC39A13-201ENST00000354884 PRXQ9BXM0 1461 aa26.16■■□□□ 1.78
SLC39A13-201ENST00000354884 TOPBP1Q92547 1522 aa26.14■■□□□ 1.78
SLC39A13-201ENST00000354884 PDS5BQ9NTI5 1447 aa26.14■■□□□ 1.77
SLC39A13-201ENST00000354884 ERICH3Q5RHP9 1530 aa26.13■■□□□ 1.77
SLC39A13-201ENST00000354884 CUX2O14529 1486 aa26.13■■□□□ 1.77
SLC39A13-201ENST00000354884 URB2Q14146 1524 aaKnown RBP26.05■■□□□ 1.76
SLC39A13-201ENST00000354884 POLA1P09884 1462 aaPredicted RBP26.04■■□□□ 1.76
SLC39A13-201ENST00000354884 KIF21AQ7Z4S6 1674 aa26.04■■□□□ 1.76
SLC39A13-201ENST00000354884 CLIP1P30622 1438 aa26.01■■□□□ 1.75
SLC39A13-201ENST00000354884 IGF1RP08069 1367 aa26■■□□□ 1.75
SLC39A13-201ENST00000354884 RAD54L2Q9Y4B4 1467 aa25.99■■□□□ 1.75
SLC39A13-201ENST00000354884 ABCA10Q8WWZ4 1543 aa25.98■■□□□ 1.75
SLC39A13-201ENST00000354884 PPARGC1BQ86YN6 1023 aaKnown RBP25.95■■□□□ 1.74
SLC39A13-201ENST00000354884 CARMIL1Q5VZK9 1371 aa25.87■■□□□ 1.73
SLC39A13-201ENST00000354884 WDR97A6NE52 1622 aa25.86■■□□□ 1.73
SLC39A13-201ENST00000354884 RANGAP1P46060 587 aaPredicted RBP25.85■■□□□ 1.73
SLC39A13-201ENST00000354884 VPS8Q8N3P4 1428 aa25.82■■□□□ 1.72
SLC39A13-201ENST00000354884 HRCP23327 699 aa25.82■■□□□ 1.72
SLC39A13-201ENST00000354884 MRC2Q9UBG0 1479 aa25.78■■□□□ 1.72
SLC39A13-201ENST00000354884 ABCA5Q8WWZ7 1642 aa25.74■■□□□ 1.71
SLC39A13-201ENST00000354884 CUL7Q14999 1698 aa25.74■■□□□ 1.71
SLC39A13-201ENST00000354884 TARBP1Q13395 1621 aaKnown RBP25.72■■□□□ 1.71
SLC39A13-201ENST00000354884 TDRD9Q8NDG6 1382 aaKnown RBP25.71■■□□□ 1.71
SLC39A13-201ENST00000354884 ARAP1Q96P48 1450 aa25.71■■□□□ 1.71
SLC39A13-201ENST00000354884 TTBK1Q5TCY1 1321 aaPredicted RBP25.68■■□□□ 1.7
SLC39A13-201ENST00000354884 GAPVD1Q14C86 1478 aa25.68■■□□□ 1.7
SLC39A13-201ENST00000354884 ARHGAP35Q9NRY4 1499 aa25.65■■□□□ 1.7
SLC39A13-201ENST00000354884 WDR62O43379 1518 aa25.63■■□□□ 1.69
SLC39A13-201ENST00000354884 APLP2Q06481 763 aa25.6■■□□□ 1.69
SLC39A13-201ENST00000354884 ERCC6Q03468 1493 aa25.59■■□□□ 1.69
SLC39A13-201ENST00000354884 CTTNBP2Q8WZ74 1663 aa25.52■■□□□ 1.68
SLC39A13-201ENST00000354884 IFT140Q96RY7 1462 aa25.52■■□□□ 1.68
SLC39A13-201ENST00000354884 PBRM1Q86U86 1689 aa25.52■■□□□ 1.68
SLC39A13-201ENST00000354884 AQRO60306 1485 aaKnown RBP eCLIP25.49■■□□□ 1.678e-7■■■■■ 30.3
SLC39A13-201ENST00000354884 THOC2Q8NI27 1593 aaKnown RBP25.48■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms