RNA–Protein interactions for RNA: ENST00000243052.7

PDE1B-201, Transcript of phosphodiesterase 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDE1B, Length 3,444 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1B-201ENST00000243052 NISCHQ9Y2I1 1504 aa30.63■■■□□ 2.49
PDE1B-201ENST00000243052 SHROOM4Q9ULL8 1493 aa27.48■■□□□ 1.99
PDE1B-201ENST00000243052 SUPT5HO00267 1087 aaKnown RBP27.19■■□□□ 1.94
PDE1B-201ENST00000243052 HRCP23327 699 aa27.16■■□□□ 1.94
PDE1B-201ENST00000243052 PPARGC1BQ86YN6 1023 aaKnown RBP27.05■■□□□ 1.92
PDE1B-201ENST00000243052 PCGF6Q9BYE7 350 aa26.91■■□□□ 1.9
PDE1B-201ENST00000243052 DCAF8L2P0C7V8 631 aa26.83■■□□□ 1.88
PDE1B-201ENST00000243052 PELP1Q8IZL8 1130 aaKnown RBP26.64■■□□□ 1.85
PDE1B-201ENST00000243052 SCAF1Q9H7N4 1312 aaKnown RBP26.05■■□□□ 1.76
PDE1B-201ENST00000243052 CHIC1Q5VXU3 224 aa26.02■■□□□ 1.76
PDE1B-201ENST00000243052 MYO15BQ96JP2 1530 aa25.89■■□□□ 1.73
PDE1B-201ENST00000243052 ZCCHC6Q5VYS8 1495 aaKnown RBP25.84■■□□□ 1.73
PDE1B-201ENST00000243052 LOC105371045A0A1W2PR82 267 aa25.68■■□□□ 1.7
PDE1B-201ENST00000243052 MYT1Q01538 1121 aa25.62■■□□□ 1.69
PDE1B-201ENST00000243052 TRIM26Q12899 539 aaPredicted RBP25.52■■□□□ 1.68
PDE1B-201ENST00000243052 EHMT2Q96KQ7 1210 aa25.47■■□□□ 1.67
PDE1B-201ENST00000243052 CCDC180Q9P1Z9 1646 aa25.37■■□□□ 1.65
PDE1B-201ENST00000243052 ZEB1P37275 1124 aaPredicted RBP25.33■■□□□ 1.65
PDE1B-201ENST00000243052 GTF3C3Q9Y5Q9 886 aa25.31■■□□□ 1.64
PDE1B-201ENST00000243052 FAM9AQ8IZU1 332 aaPredicted RBP25.3■■□□□ 1.64
PDE1B-201ENST00000243052 NEUROD1Q13562 356 aa25.29■■□□□ 1.64
PDE1B-201ENST00000243052 ACIN1Q9UKV3 1341 aaKnown RBP25.24■■□□□ 1.63
PDE1B-201ENST00000243052 DCAF1Q9Y4B6 1507 aa25.12■■□□□ 1.61
PDE1B-201ENST00000243052 CENPBP07199 599 aaPredicted RBP25.05■■□□□ 1.6
PDE1B-201ENST00000243052 TRIM41Q8WV44 630 aa25.02■■□□□ 1.6
PDE1B-201ENST00000243052 YTHDC1Q96MU7 727 aaKnown RBP24.94■■□□□ 1.58
PDE1B-201ENST00000243052 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.81■■□□□ 1.56
PDE1B-201ENST00000243052 DIEXFQ68CQ4 756 aaKnown RBP24.79■■□□□ 1.56
PDE1B-201ENST00000243052 CCER1Q8TC90 406 aaPredicted RBP24.79■■□□□ 1.56
PDE1B-201ENST00000243052 TTBK1Q5TCY1 1321 aaPredicted RBP24.65■■□□□ 1.54
PDE1B-201ENST00000243052 SCRIBQ14160 1630 aa24.65■■□□□ 1.54
PDE1B-201ENST00000243052 RSF1Q96T23 1441 aaPredicted RBP24.56■■□□□ 1.52
PDE1B-201ENST00000243052 ABCC9O60706 1549 aa24.39■■□□□ 1.49
PDE1B-201ENST00000243052 RB1CC1Q8TDY2 1594 aa24.33■■□□□ 1.49
PDE1B-201ENST00000243052 BCL11AQ9H165 835 aa24.32■■□□□ 1.48
PDE1B-201ENST00000243052 CECR2Q9BXF3 1484 aa24.22■■□□□ 1.47
PDE1B-201ENST00000243052 MIER1Q8N108 512 aa24.11■■□□□ 1.45
PDE1B-201ENST00000243052 ZNF316A6NFI3 1004 aaPredicted RBP24.06■■□□□ 1.44
PDE1B-201ENST00000243052 MROH2BQ7Z745 1585 aa24.01■■□□□ 1.43
PDE1B-201ENST00000243052 ANP32EQ9BTT0 268 aa24■■□□□ 1.43
PDE1B-201ENST00000243052 UBTFP17480 764 aaKnown RBP23.99■■□□□ 1.43
PDE1B-201ENST00000243052 RANGAP1P46060 587 aaPredicted RBP23.93■■□□□ 1.42
PDE1B-201ENST00000243052 CSRNP3Q8WYN3 585 aa23.91■■□□□ 1.42
PDE1B-201ENST00000243052 WIZO95785 1651 aa23.86■■□□□ 1.41
PDE1B-201ENST00000243052 BCANQ96GW7 911 aa23.82■■□□□ 1.4
PDE1B-201ENST00000243052 SUPT16HQ9Y5B9 1047 aaKnown RBP23.79■■□□□ 1.4
PDE1B-201ENST00000243052 TSHZ2Q9NRE2 1034 aa23.76■■□□□ 1.39
PDE1B-201ENST00000243052 PABPN1Q86U42 306 aaKnown RBP eCLIP23.74■■□□□ 1.39
PDE1B-201ENST00000243052 HNRNPUL2Q1KMD3 747 aaKnown RBP23.73■■□□□ 1.39
PDE1B-201ENST00000243052 NACADO15069 1562 aa23.68■■□□□ 1.38
PDE1B-201ENST00000243052 ABCC8Q09428 1581 aa23.68■■□□□ 1.38
PDE1B-201ENST00000243052 CCDC88BA6NC98 1476 aa23.63■■□□□ 1.37
PDE1B-201ENST00000243052 SOGA1O94964 1423 aa23.61■■□□□ 1.37
PDE1B-201ENST00000243052 CEP162Q5TB80 1403 aa23.58■■□□□ 1.36
PDE1B-201ENST00000243052 APLP2Q06481 763 aa23.52■■□□□ 1.36
PDE1B-201ENST00000243052 PRKCSHP14314 528 aaPredicted RBP23.49■■□□□ 1.35
PDE1B-201ENST00000243052 BAZ1AQ9NRL2 1556 aaPredicted RBP23.47■■□□□ 1.35
PDE1B-201ENST00000243052 RUSC2Q8N2Y8 1516 aa23.46■■□□□ 1.35
PDE1B-201ENST00000243052 ERICH6Q7L0X2 663 aa23.36■■□□□ 1.33
PDE1B-201ENST00000243052 FKBP8Q14318 412 aa23.36■■□□□ 1.33
PDE1B-201ENST00000243052 TNIKQ9UKE5 1360 aa23.35■■□□□ 1.33
PDE1B-201ENST00000243052 ITGAEP38570 1179 aa23.34■■□□□ 1.33
PDE1B-201ENST00000243052 TOP2AP11388 1531 aaKnown RBP23.28■■□□□ 1.32
PDE1B-201ENST00000243052 CLSPNQ9HAW4 1339 aa23.26■■□□□ 1.31
PDE1B-201ENST00000243052 RBM19Q9Y4C8 960 aaKnown RBP23.25■■□□□ 1.31
PDE1B-201ENST00000243052 WRNQ14191 1432 aaPredicted RBP eCLIP23.22■■□□□ 1.31
PDE1B-201ENST00000243052 SMARCA2P51531 1590 aa23.21■■□□□ 1.31
PDE1B-201ENST00000243052 NEFLP07196 543 aa23.2■■□□□ 1.3
PDE1B-201ENST00000243052 KCNH8Q96L42 1107 aa23.19■■□□□ 1.3
PDE1B-201ENST00000243052 SMARCA4P51532 1647 aa23.19■■□□□ 1.3
PDE1B-201ENST00000243052 GOLGA3Q08378 1498 aa23.18■■□□□ 1.3
PDE1B-201ENST00000243052 EIF4G1Q04637 1599 aaKnown RBP23.14■■□□□ 1.3
PDE1B-201ENST00000243052 CLIP1P30622 1438 aa23.14■■□□□ 1.29
PDE1B-201ENST00000243052 EEA1Q15075 1411 aa23.1■■□□□ 1.29
PDE1B-201ENST00000243052 MSH5O43196 834 aa22.99■■□□□ 1.27
PDE1B-201ENST00000243052 TRIM52Q96A61 297 aa22.98■■□□□ 1.27
PDE1B-201ENST00000243052 CEP164Q9UPV0 1460 aa22.98■■□□□ 1.27
PDE1B-201ENST00000243052 ANO8Q9HCE9 1232 aaPredicted RBP22.93■■□□□ 1.26
PDE1B-201ENST00000243052 RAPGEF2Q9Y4G8 1499 aa22.92■■□□□ 1.26
PDE1B-201ENST00000243052 ATP1B4Q9UN42 357 aaPredicted RBP22.91■■□□□ 1.26
PDE1B-201ENST00000243052 IRX6P78412 446 aaPredicted RBP22.9■■□□□ 1.26
PDE1B-201ENST00000243052 DEKP35659 375 aaKnown RBP22.88■■□□□ 1.25
PDE1B-201ENST00000243052 VPS8Q8N3P4 1428 aa22.88■■□□□ 1.25
PDE1B-201ENST00000243052 NBR1Q14596 966 aa22.87■■□□□ 1.25
PDE1B-201ENST00000243052 KANK4Q5T7N3 995 aaPredicted RBP22.86■■□□□ 1.25
PDE1B-201ENST00000243052 SYNJ1O43426 1573 aa22.85■■□□□ 1.25
PDE1B-201ENST00000243052 DDX10Q13206 875 aaKnown RBP22.83■■□□□ 1.25
PDE1B-201ENST00000243052 BAZ1BQ9UIG0 1483 aaKnown RBP22.81■■□□□ 1.24
PDE1B-201ENST00000243052 CCDC136Q96JN2 1154 aa22.79■■□□□ 1.24
PDE1B-201ENST00000243052 CDK11AQ9UQ88 783 aaPredicted RBP22.78■■□□□ 1.24
PDE1B-201ENST00000243052 UNC13AQ9UPW8 1703 aa22.76■■□□□ 1.23
PDE1B-201ENST00000243052 HIRIP3Q9BW71 556 aaPredicted RBP22.73■■□□□ 1.23
PDE1B-201ENST00000243052 RTN4Q9NQC3 1192 aaKnown RBP22.73■■□□□ 1.23
PDE1B-201ENST00000243052 ATAD2BQ9ULI0 1458 aa22.71■■□□□ 1.23
PDE1B-201ENST00000243052 P3H3Q8IVL6 736 aa22.7■■□□□ 1.22
PDE1B-201ENST00000243052 FAM50AQ14320 339 aaKnown RBP22.66■■□□□ 1.22
PDE1B-201ENST00000243052 SALL2Q9Y467 1007 aaPredicted RBP22.66■■□□□ 1.22
PDE1B-201ENST00000243052 KIF21BO75037 1637 aa22.65■■□□□ 1.22
PDE1B-201ENST00000243052 DHX57Q6P158 1386 aaKnown RBP22.63■■□□□ 1.21
PDE1B-201ENST00000243052 BICRAQ9NZM4 1560 aa22.63■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 155 ms