RNA–Protein interactions for RNA: ENST00000613496.4

HPCAL1-206, Transcript of hippocalcin like 1, humanhuman

APPRIS P1 TSL 3 BASIC

Gene HPCAL1, Length 1,547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPCAL1-206ENST00000613496 NISCHQ9Y2I1 1504 aa40.82■■■■■ 4.13
HPCAL1-206ENST00000613496 CCDC180Q9P1Z9 1646 aa36.05■■■■□ 3.36
HPCAL1-206ENST00000613496 ABCC9O60706 1549 aa34.25■■■■□ 3.07
HPCAL1-206ENST00000613496 ZCCHC6Q5VYS8 1495 aaKnown RBP34.23■■■■□ 3.07
HPCAL1-206ENST00000613496 DCAF1Q9Y4B6 1507 aa33.86■■■■□ 3.01
HPCAL1-206ENST00000613496 MYO15BQ96JP2 1530 aa33.67■■■□□ 2.98
HPCAL1-206ENST00000613496 NACADO15069 1562 aa33.56■■■□□ 2.96
HPCAL1-206ENST00000613496 DCAF8L2P0C7V8 631 aa33.45■■■□□ 2.95
HPCAL1-206ENST00000613496 RB1CC1Q8TDY2 1594 aa33.39■■■□□ 2.94
HPCAL1-206ENST00000613496 UNC13AQ9UPW8 1703 aa32.91■■■□□ 2.86
HPCAL1-206ENST00000613496 SCRIBQ14160 1630 aa32.87■■■□□ 2.85
HPCAL1-206ENST00000613496 SHROOM4Q9ULL8 1493 aa32.63■■■□□ 2.81
HPCAL1-206ENST00000613496 BICRAQ9NZM4 1560 aa32.46■■■□□ 2.79
HPCAL1-206ENST00000613496 PABPN1Q86U42 306 aaKnown RBP eCLIP32.05■■■□□ 2.72
HPCAL1-206ENST00000613496 CECR2Q9BXF3 1484 aa31.7■■■□□ 2.66
HPCAL1-206ENST00000613496 BAZ1AQ9NRL2 1556 aaPredicted RBP31.58■■■□□ 2.65
HPCAL1-206ENST00000613496 SMARCA4P51532 1647 aa31.56■■■□□ 2.64
HPCAL1-206ENST00000613496 MROH2BQ7Z745 1585 aa31.49■■■□□ 2.63
HPCAL1-206ENST00000613496 EIF4G1Q04637 1599 aaKnown RBP31.46■■■□□ 2.63
HPCAL1-206ENST00000613496 RSF1Q96T23 1441 aaPredicted RBP31.39■■■□□ 2.62
HPCAL1-206ENST00000613496 PEG3Q9GZU2 1588 aa31.26■■■□□ 2.6
HPCAL1-206ENST00000613496 WIZO95785 1651 aa31.26■■■□□ 2.59
HPCAL1-206ENST00000613496 CC2D2AQ9P2K1 1620 aa31.13■■■□□ 2.57
HPCAL1-206ENST00000613496 SMARCA2P51531 1590 aa31.09■■■□□ 2.57
HPCAL1-206ENST00000613496 ATAD2BQ9ULI0 1458 aa31.08■■■□□ 2.57
HPCAL1-206ENST00000613496 SUPT5HO00267 1087 aaKnown RBP31.05■■■□□ 2.56
HPCAL1-206ENST00000613496 HMGXB3Q12766 1538 aa30.93■■■□□ 2.54
HPCAL1-206ENST00000613496 TOP2AP11388 1531 aaKnown RBP30.92■■■□□ 2.54
HPCAL1-206ENST00000613496 NCAPD3P42695 1498 aa30.92■■■□□ 2.54
HPCAL1-206ENST00000613496 BAZ1BQ9UIG0 1483 aaKnown RBP30.84■■■□□ 2.53
HPCAL1-206ENST00000613496 DNAJC5BQ9UF47 199 aa30.63■■■□□ 2.49
HPCAL1-206ENST00000613496 CCDC88BA6NC98 1476 aa30.5■■■□□ 2.47
HPCAL1-206ENST00000613496 PRDM2Q13029 1718 aa30.19■■■□□ 2.42
HPCAL1-206ENST00000613496 CFTRP13569 1480 aa30.08■■■□□ 2.41
HPCAL1-206ENST00000613496 LAMC3Q9Y6N6 1575 aa30.02■■■□□ 2.4
HPCAL1-206ENST00000613496 CADPSQ9ULU8 1353 aa30■■■□□ 2.39
HPCAL1-206ENST00000613496 NESP48681 1621 aa29.95■■■□□ 2.39
HPCAL1-206ENST00000613496 KIF21AQ7Z4S6 1674 aa29.76■■■□□ 2.36
HPCAL1-206ENST00000613496 ABCC8Q09428 1581 aa29.71■■■□□ 2.35
HPCAL1-206ENST00000613496 FANCD2Q9BXW9 1451 aa29.7■■■□□ 2.35
HPCAL1-206ENST00000613496 PDS5BQ9NTI5 1447 aa29.65■■■□□ 2.34
HPCAL1-206ENST00000613496 CEP164Q9UPV0 1460 aa29.59■■■□□ 2.33
HPCAL1-206ENST00000613496 SYNJ1O43426 1573 aa29.56■■■□□ 2.32
HPCAL1-206ENST00000613496 CHIC1Q5VXU3 224 aa29.56■■■□□ 2.32
HPCAL1-206ENST00000613496 BIVM-ERCC5R4GMW8 1640 aa29.55■■■□□ 2.32
HPCAL1-206ENST00000613496 WRNQ14191 1432 aaPredicted RBP eCLIP29.53■■■□□ 2.32
HPCAL1-206ENST00000613496 TOP2BQ02880 1626 aa29.5■■■□□ 2.31
HPCAL1-206ENST00000613496 CUX1P39880 1505 aa29.5■■■□□ 2.31
HPCAL1-206ENST00000613496 DNMBPQ6XZF7 1577 aa29.44■■■□□ 2.3
HPCAL1-206ENST00000613496 THOC2Q8NI27 1593 aaKnown RBP29.42■■■□□ 2.3
HPCAL1-206ENST00000613496 URB2Q14146 1524 aaKnown RBP29.41■■■□□ 2.3
HPCAL1-206ENST00000613496 ERCC6Q03468 1493 aa29.39■■■□□ 2.29
HPCAL1-206ENST00000613496 TOPBP1Q92547 1522 aa29.37■■■□□ 2.29
HPCAL1-206ENST00000613496 MRC2Q9UBG0 1479 aa29.37■■■□□ 2.29
HPCAL1-206ENST00000613496 WDR62O43379 1518 aa29.33■■■□□ 2.29
HPCAL1-206ENST00000613496 TRIM41Q8WV44 630 aa29.28■■■□□ 2.28
HPCAL1-206ENST00000613496 FGD5Q6ZNL6 1462 aa29.22■■■□□ 2.27
HPCAL1-206ENST00000613496 POLA1P09884 1462 aaPredicted RBP29.18■■■□□ 2.26
HPCAL1-206ENST00000613496 WDR97A6NE52 1622 aa29.14■■■□□ 2.26
HPCAL1-206ENST00000613496 TARBP1Q13395 1621 aaKnown RBP29.08■■■□□ 2.25
HPCAL1-206ENST00000613496 CUX2O14529 1486 aa29.06■■■□□ 2.24
HPCAL1-206ENST00000613496 RAD54L2Q9Y4B4 1467 aa29■■■□□ 2.23
HPCAL1-206ENST00000613496 ABCA10Q8WWZ4 1543 aa28.99■■■□□ 2.23
HPCAL1-206ENST00000613496 SOGA1O94964 1423 aa28.96■■■□□ 2.23
HPCAL1-206ENST00000613496 IFT140Q96RY7 1462 aa28.92■■■□□ 2.22
HPCAL1-206ENST00000613496 RUSC2Q8N2Y8 1516 aa28.91■■■□□ 2.22
HPCAL1-206ENST00000613496 ABCA5Q8WWZ7 1642 aa28.91■■■□□ 2.22
HPCAL1-206ENST00000613496 EEA1Q15075 1411 aa28.85■■■□□ 2.21
HPCAL1-206ENST00000613496 KIF27Q86VH2 1401 aa28.82■■■□□ 2.2
HPCAL1-206ENST00000613496 PBRM1Q86U86 1689 aa28.78■■■□□ 2.2
HPCAL1-206ENST00000613496 EIF4G3O43432 1585 aaKnown RBP28.78■■■□□ 2.2
HPCAL1-206ENST00000613496 ZNF608Q9ULD9 1512 aaPredicted RBP28.76■■■□□ 2.2
HPCAL1-206ENST00000613496 TDRD9Q8NDG6 1382 aaKnown RBP28.7■■■□□ 2.18
HPCAL1-206ENST00000613496 GAPVD1Q14C86 1478 aa28.7■■■□□ 2.18
HPCAL1-206ENST00000613496 ERICH3Q5RHP9 1530 aa28.67■■■□□ 2.18
HPCAL1-206ENST00000613496 FAM9AQ8IZU1 332 aaPredicted RBP28.65■■■□□ 2.18
HPCAL1-206ENST00000613496 AQRO60306 1485 aaKnown RBP eCLIP28.65■■■□□ 2.183e-10■■■■■ 34.9
HPCAL1-206ENST00000613496 CUL7Q14999 1698 aa28.63■■■□□ 2.17
HPCAL1-206ENST00000613496 KIF21BO75037 1637 aa28.63■■■□□ 2.17
HPCAL1-206ENST00000613496 IGF1RP08069 1367 aa28.6■■■□□ 2.17
HPCAL1-206ENST00000613496 CSRNP3Q8WYN3 585 aa28.59■■■□□ 2.17
HPCAL1-206ENST00000613496 GRIN2BQ13224 1484 aa28.57■■■□□ 2.16
HPCAL1-206ENST00000613496 PRXQ9BXM0 1461 aa28.57■■■□□ 2.16
HPCAL1-206ENST00000613496 ADAMTS12P58397 1594 aa28.53■■■□□ 2.16
HPCAL1-206ENST00000613496 SNAPC4Q5SXM2 1469 aa28.44■■■□□ 2.14
HPCAL1-206ENST00000613496 MAGI1Q96QZ7 1491 aaPredicted RBP28.44■■■□□ 2.14
HPCAL1-206ENST00000613496 RAPGEF2Q9Y4G8 1499 aa28.43■■■□□ 2.14
HPCAL1-206ENST00000613496 CARMIL1Q5VZK9 1371 aa28.42■■■□□ 2.14
HPCAL1-206ENST00000613496 GOLGA3Q08378 1498 aa28.41■■■□□ 2.14
HPCAL1-206ENST00000613496 FHAD1B1AJZ9 1412 aa28.38■■■□□ 2.13
HPCAL1-206ENST00000613496 CHD1O14646 1710 aa28.32■■■□□ 2.12
HPCAL1-206ENST00000613496 LOC105371045A0A1W2PR82 267 aa28.31■■■□□ 2.12
HPCAL1-206ENST00000613496 SYNJ2O15056 1496 aa28.31■■■□□ 2.12
HPCAL1-206ENST00000613496 CTTNBP2Q8WZ74 1663 aa28.3■■■□□ 2.12
HPCAL1-206ENST00000613496 GRIN2AQ12879 1464 aa28.25■■■□□ 2.11
HPCAL1-206ENST00000613496 EHMT2Q96KQ7 1210 aa28.18■■■□□ 2.1
HPCAL1-206ENST00000613496 TNIKQ9UKE5 1360 aa28.18■■■□□ 2.1
HPCAL1-206ENST00000613496 CEP170Q5SW79 1584 aa28.14■■■□□ 2.1
HPCAL1-206ENST00000613496 NUP160Q12769 1436 aa28.1■■■□□ 2.09
HPCAL1-206ENST00000613496 UBTFP17480 764 aaKnown RBP28.08■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms