RNA–Protein interactions for RNA: ENST00000305572.12

NPNT-201, Transcript of nephronectin, humanhuman

TSL 1 (best) BASIC

Gene NPNT, Length 3,003 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPNT-201ENST00000305572 NISCHQ9Y2I1 1504 aa33.84■■■■□ 3.01
NPNT-201ENST00000305572 SHROOM4Q9ULL8 1493 aa29.45■■■□□ 2.3
NPNT-201ENST00000305572 SUPT5HO00267 1087 aaKnown RBP28.79■■■□□ 2.2
NPNT-201ENST00000305572 DCAF8L2P0C7V8 631 aa28.67■■■□□ 2.18
NPNT-201ENST00000305572 ZCCHC6Q5VYS8 1495 aaKnown RBP28.58■■■□□ 2.17
NPNT-201ENST00000305572 CCDC180Q9P1Z9 1646 aa28.49■■■□□ 2.15
NPNT-201ENST00000305572 MYO15BQ96JP2 1530 aa27.79■■■□□ 2.04
NPNT-201ENST00000305572 CHIC1Q5VXU3 224 aa27.75■■■□□ 2.03
NPNT-201ENST00000305572 DCAF1Q9Y4B6 1507 aa27.43■■□□□ 1.98
NPNT-201ENST00000305572 LOC105371045A0A1W2PR82 267 aa27.22■■□□□ 1.95
NPNT-201ENST00000305572 SCRIBQ14160 1630 aa27.21■■□□□ 1.95
NPNT-201ENST00000305572 PCGF6Q9BYE7 350 aa27.04■■□□□ 1.92
NPNT-201ENST00000305572 ABCC9O60706 1549 aa27.02■■□□□ 1.92
NPNT-201ENST00000305572 RSF1Q96T23 1441 aaPredicted RBP26.9■■□□□ 1.9
NPNT-201ENST00000305572 EHMT2Q96KQ7 1210 aa26.77■■□□□ 1.88
NPNT-201ENST00000305572 HRCP23327 699 aa26.75■■□□□ 1.87
NPNT-201ENST00000305572 FAM9AQ8IZU1 332 aaPredicted RBP26.71■■□□□ 1.87
NPNT-201ENST00000305572 RB1CC1Q8TDY2 1594 aa26.71■■□□□ 1.87
NPNT-201ENST00000305572 CECR2Q9BXF3 1484 aa26.7■■□□□ 1.86
NPNT-201ENST00000305572 PPARGC1BQ86YN6 1023 aaKnown RBP26.68■■□□□ 1.86
NPNT-201ENST00000305572 TRIM41Q8WV44 630 aa26.57■■□□□ 1.84
NPNT-201ENST00000305572 MROH2BQ7Z745 1585 aa26.5■■□□□ 1.83
NPNT-201ENST00000305572 NACADO15069 1562 aa26.42■■□□□ 1.82
NPNT-201ENST00000305572 WIZO95785 1651 aa26.38■■□□□ 1.81
NPNT-201ENST00000305572 TRIM26Q12899 539 aaPredicted RBP26.19■■□□□ 1.78
NPNT-201ENST00000305572 PABPN1Q86U42 306 aaKnown RBP eCLIP26.03■■□□□ 1.76
NPNT-201ENST00000305572 BAZ1AQ9NRL2 1556 aaPredicted RBP25.93■■□□□ 1.74
NPNT-201ENST00000305572 UNC13AQ9UPW8 1703 aa25.91■■□□□ 1.74
NPNT-201ENST00000305572 ABCC8Q09428 1581 aa25.89■■□□□ 1.74
NPNT-201ENST00000305572 TTBK1Q5TCY1 1321 aaPredicted RBP25.82■■□□□ 1.72
NPNT-201ENST00000305572 EIF4G1Q04637 1599 aaKnown RBP25.8■■□□□ 1.72
NPNT-201ENST00000305572 CCDC88BA6NC98 1476 aa25.79■■□□□ 1.72
NPNT-201ENST00000305572 SMARCA4P51532 1647 aa25.78■■□□□ 1.72
NPNT-201ENST00000305572 TOP2AP11388 1531 aaKnown RBP25.7■■□□□ 1.7
NPNT-201ENST00000305572 SMARCA2P51531 1590 aa25.67■■□□□ 1.7
NPNT-201ENST00000305572 SOGA1O94964 1423 aa25.63■■□□□ 1.69
NPNT-201ENST00000305572 RUSC2Q8N2Y8 1516 aa25.59■■□□□ 1.69
NPNT-201ENST00000305572 BICRAQ9NZM4 1560 aa25.58■■□□□ 1.68
NPNT-201ENST00000305572 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.53■■□□□ 1.68
NPNT-201ENST00000305572 UBTFP17480 764 aaKnown RBP25.38■■□□□ 1.65
NPNT-201ENST00000305572 CEP162Q5TB80 1403 aa25.34■■□□□ 1.65
NPNT-201ENST00000305572 ZEB1P37275 1124 aaPredicted RBP25.32■■□□□ 1.64
NPNT-201ENST00000305572 CSRNP3Q8WYN3 585 aa25.32■■□□□ 1.64
NPNT-201ENST00000305572 RANGAP1P46060 587 aaPredicted RBP25.28■■□□□ 1.64
NPNT-201ENST00000305572 CCER1Q8TC90 406 aaPredicted RBP25.25■■□□□ 1.63
NPNT-201ENST00000305572 WRNQ14191 1432 aaPredicted RBP eCLIP25.22■■□□□ 1.63
NPNT-201ENST00000305572 SYNJ1O43426 1573 aa25.19■■□□□ 1.62
NPNT-201ENST00000305572 ATAD2BQ9ULI0 1458 aa25.18■■□□□ 1.62
NPNT-201ENST00000305572 TNIKQ9UKE5 1360 aa25.15■■□□□ 1.62
NPNT-201ENST00000305572 BAZ1BQ9UIG0 1483 aaKnown RBP25.1■■□□□ 1.61
NPNT-201ENST00000305572 PEG3Q9GZU2 1588 aa25.09■■□□□ 1.61
NPNT-201ENST00000305572 GOLGA3Q08378 1498 aa25.01■■□□□ 1.59
NPNT-201ENST00000305572 EEA1Q15075 1411 aa24.95■■□□□ 1.58
NPNT-201ENST00000305572 HNRNPUL2Q1KMD3 747 aaKnown RBP24.94■■□□□ 1.58
NPNT-201ENST00000305572 RAPGEF2Q9Y4G8 1499 aa24.94■■□□□ 1.58
NPNT-201ENST00000305572 CLIP1P30622 1438 aa24.85■■□□□ 1.57
NPNT-201ENST00000305572 CEP164Q9UPV0 1460 aa24.84■■□□□ 1.57
NPNT-201ENST00000305572 SCAF1Q9H7N4 1312 aaKnown RBP24.83■■□□□ 1.56
NPNT-201ENST00000305572 KIF21BO75037 1637 aa24.74■■□□□ 1.55
NPNT-201ENST00000305572 DIEXFQ68CQ4 756 aaKnown RBP24.7■■□□□ 1.54
NPNT-201ENST00000305572 TOP2BQ02880 1626 aa24.68■■□□□ 1.54
NPNT-201ENST00000305572 VPS8Q8N3P4 1428 aa24.65■■□□□ 1.54
NPNT-201ENST00000305572 CUX1P39880 1505 aa24.62■■□□□ 1.53
NPNT-201ENST00000305572 APLP2Q06481 763 aa24.59■■□□□ 1.53
NPNT-201ENST00000305572 NEUROD1Q13562 356 aa24.59■■□□□ 1.53
NPNT-201ENST00000305572 KANK4Q5T7N3 995 aaPredicted RBP24.59■■□□□ 1.53
NPNT-201ENST00000305572 NCAPD3P42695 1498 aa24.56■■□□□ 1.52
NPNT-201ENST00000305572 BIVM-ERCC5R4GMW8 1640 aa24.54■■□□□ 1.52
NPNT-201ENST00000305572 PRXQ9BXM0 1461 aa24.48■■□□□ 1.51
NPNT-201ENST00000305572 ARAP1Q96P48 1450 aa24.48■■□□□ 1.51
NPNT-201ENST00000305572 HMGXB3Q12766 1538 aa24.46■■□□□ 1.51
NPNT-201ENST00000305572 ZNF316A6NFI3 1004 aaPredicted RBP24.43■■□□□ 1.5
NPNT-201ENST00000305572 CFTRP13569 1480 aa24.42■■□□□ 1.5
NPNT-201ENST00000305572 YTHDC1Q96MU7 727 aaKnown RBP24.42■■□□□ 1.5
NPNT-201ENST00000305572 ACIN1Q9UKV3 1341 aaKnown RBP24.4■■□□□ 1.5
NPNT-201ENST00000305572 ITGAEP38570 1179 aa24.38■■□□□ 1.49
NPNT-201ENST00000305572 KIF27Q86VH2 1401 aa24.36■■□□□ 1.49
NPNT-201ENST00000305572 ERICH3Q5RHP9 1530 aa24.31■■□□□ 1.48
NPNT-201ENST00000305572 MIER1Q8N108 512 aa24.31■■□□□ 1.48
NPNT-201ENST00000305572 CUX2O14529 1486 aa24.29■■□□□ 1.48
NPNT-201ENST00000305572 P3H3Q8IVL6 736 aa24.29■■□□□ 1.48
NPNT-201ENST00000305572 GTF3C3Q9Y5Q9 886 aa24.28■■□□□ 1.48
NPNT-201ENST00000305572 ARHGAP35Q9NRY4 1499 aa24.27■■□□□ 1.48
NPNT-201ENST00000305572 IGF1RP08069 1367 aa24.24■■□□□ 1.47
NPNT-201ENST00000305572 CADPSQ9ULU8 1353 aa24.2■■□□□ 1.46
NPNT-201ENST00000305572 FGD5Q6ZNL6 1462 aa24.18■■□□□ 1.46
NPNT-201ENST00000305572 DHX57Q6P158 1386 aaKnown RBP24.18■■□□□ 1.46
NPNT-201ENST00000305572 ATP1B4Q9UN42 357 aaPredicted RBP24.16■■□□□ 1.46
NPNT-201ENST00000305572 CC2D2AQ9P2K1 1620 aa24.14■■□□□ 1.46
NPNT-201ENST00000305572 DNAJC5BQ9UF47 199 aa24.14■■□□□ 1.45
NPNT-201ENST00000305572 NESP48681 1621 aa24.13■■□□□ 1.45
NPNT-201ENST00000305572 CARMIL1Q5VZK9 1371 aa24.11■■□□□ 1.45
NPNT-201ENST00000305572 RAD54L2Q9Y4B4 1467 aa24.11■■□□□ 1.45
NPNT-201ENST00000305572 CENPBP07199 599 aaPredicted RBP24.08■■□□□ 1.45
NPNT-201ENST00000305572 CCNB3Q8WWL7 1395 aa24.04■■□□□ 1.44
NPNT-201ENST00000305572 RRBP1Q9P2E9 1410 aaKnown RBP24.03■■□□□ 1.44
NPNT-201ENST00000305572 PRDM2Q13029 1718 aa24.02■■□□□ 1.44
NPNT-201ENST00000305572 FANCD2Q9BXW9 1451 aa24.02■■□□□ 1.44
NPNT-201ENST00000305572 FAM50AQ14320 339 aaKnown RBP23.96■■□□□ 1.43
NPNT-201ENST00000305572 PHLDB1Q86UU1 1377 aa23.95■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 93.4 ms