RNA–Protein interactions for RNA: ENST00000274054.2

NAF1-201, Transcript of nuclear assembly factor 1 ribonucleoprotein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NAF1, Length 1,907 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NAF1-201ENST00000274054 NISCHQ9Y2I1 1504 aa34.13■■■■□ 3.05
NAF1-201ENST00000274054 CCDC180Q9P1Z9 1646 aa29.68■■■□□ 2.34
NAF1-201ENST00000274054 ZCCHC6Q5VYS8 1495 aaKnown RBP28.74■■■□□ 2.19
NAF1-201ENST00000274054 DCAF1Q9Y4B6 1507 aa28.24■■■□□ 2.11
NAF1-201ENST00000274054 DCAF8L2P0C7V8 631 aa28.02■■■□□ 2.08
NAF1-201ENST00000274054 SHROOM4Q9ULL8 1493 aa28■■■□□ 2.07
NAF1-201ENST00000274054 MYO15BQ96JP2 1530 aa27.8■■■□□ 2.04
NAF1-201ENST00000274054 ABCC9O60706 1549 aa27.73■■■□□ 2.03
NAF1-201ENST00000274054 NACADO15069 1562 aa27.54■■■□□ 2
NAF1-201ENST00000274054 SUPT5HO00267 1087 aaKnown RBP27.45■■□□□ 1.98
NAF1-201ENST00000274054 SCRIBQ14160 1630 aa27.29■■□□□ 1.96
NAF1-201ENST00000274054 RB1CC1Q8TDY2 1594 aa27.24■■□□□ 1.95
NAF1-201ENST00000274054 CHIC1Q5VXU3 224 aa26.92■■□□□ 1.9
NAF1-201ENST00000274054 UNC13AQ9UPW8 1703 aa26.76■■□□□ 1.88
NAF1-201ENST00000274054 RSF1Q96T23 1441 aaPredicted RBP26.57■■□□□ 1.84
NAF1-201ENST00000274054 CECR2Q9BXF3 1484 aa26.48■■□□□ 1.83
NAF1-201ENST00000274054 BICRAQ9NZM4 1560 aa26.41■■□□□ 1.82
NAF1-201ENST00000274054 MROH2BQ7Z745 1585 aa26.37■■□□□ 1.81
NAF1-201ENST00000274054 BAZ1AQ9NRL2 1556 aaPredicted RBP26.34■■□□□ 1.81
NAF1-201ENST00000274054 HRCP23327 699 aa26.27■■□□□ 1.8
NAF1-201ENST00000274054 WIZO95785 1651 aa26.2■■□□□ 1.78
NAF1-201ENST00000274054 SMARCA4P51532 1647 aa26.2■■□□□ 1.78
NAF1-201ENST00000274054 PABPN1Q86U42 306 aaKnown RBP eCLIP26.18■■□□□ 1.78
NAF1-201ENST00000274054 PCGF6Q9BYE7 350 aa26.02■■□□□ 1.76
NAF1-201ENST00000274054 TOP2AP11388 1531 aaKnown RBP25.93■■□□□ 1.74
NAF1-201ENST00000274054 LOC105371045A0A1W2PR82 267 aa25.92■■□□□ 1.74
NAF1-201ENST00000274054 PEG3Q9GZU2 1588 aa25.87■■□□□ 1.73
NAF1-201ENST00000274054 TRIM26Q12899 539 aaPredicted RBP25.78■■□□□ 1.72
NAF1-201ENST00000274054 TRIM41Q8WV44 630 aa25.78■■□□□ 1.72
NAF1-201ENST00000274054 SMARCA2P51531 1590 aa25.7■■□□□ 1.71
NAF1-201ENST00000274054 ATAD2BQ9ULI0 1458 aa25.67■■□□□ 1.7
NAF1-201ENST00000274054 CCDC88BA6NC98 1476 aa25.64■■□□□ 1.7
NAF1-201ENST00000274054 EIF4G1Q04637 1599 aaKnown RBP25.62■■□□□ 1.69
NAF1-201ENST00000274054 BAZ1BQ9UIG0 1483 aaKnown RBP25.54■■□□□ 1.68
NAF1-201ENST00000274054 ZEB1P37275 1124 aaPredicted RBP25.46■■□□□ 1.67
NAF1-201ENST00000274054 HMGXB3Q12766 1538 aa25.41■■□□□ 1.66
NAF1-201ENST00000274054 NCAPD3P42695 1498 aa25.39■■□□□ 1.66
NAF1-201ENST00000274054 PPARGC1BQ86YN6 1023 aaKnown RBP25.33■■□□□ 1.65
NAF1-201ENST00000274054 FAM9AQ8IZU1 332 aaPredicted RBP25.26■■□□□ 1.63
NAF1-201ENST00000274054 ABCC8Q09428 1581 aa25.22■■□□□ 1.63
NAF1-201ENST00000274054 CC2D2AQ9P2K1 1620 aa25.14■■□□□ 1.62
NAF1-201ENST00000274054 WRNQ14191 1432 aaPredicted RBP eCLIP25.01■■□□□ 1.59
NAF1-201ENST00000274054 EEA1Q15075 1411 aa24.96■■□□□ 1.59
NAF1-201ENST00000274054 CFTRP13569 1480 aa24.92■■□□□ 1.58
NAF1-201ENST00000274054 SYNJ1O43426 1573 aa24.92■■□□□ 1.58
NAF1-201ENST00000274054 PRDM2Q13029 1718 aa24.9■■□□□ 1.58
NAF1-201ENST00000274054 EHMT2Q96KQ7 1210 aa24.81■■□□□ 1.56
NAF1-201ENST00000274054 TNIKQ9UKE5 1360 aa24.81■■□□□ 1.56
NAF1-201ENST00000274054 TOP2BQ02880 1626 aa24.8■■□□□ 1.56
NAF1-201ENST00000274054 BIVM-ERCC5R4GMW8 1640 aa24.79■■□□□ 1.56
NAF1-201ENST00000274054 SOGA1O94964 1423 aa24.78■■□□□ 1.56
NAF1-201ENST00000274054 CADPSQ9ULU8 1353 aa24.75■■□□□ 1.55
NAF1-201ENST00000274054 CSRNP3Q8WYN3 585 aa24.72■■□□□ 1.55
NAF1-201ENST00000274054 CEP162Q5TB80 1403 aa24.69■■□□□ 1.54
NAF1-201ENST00000274054 RUSC2Q8N2Y8 1516 aa24.67■■□□□ 1.54
NAF1-201ENST00000274054 CUX1P39880 1505 aa24.65■■□□□ 1.54
NAF1-201ENST00000274054 GOLGA3Q08378 1498 aa24.61■■□□□ 1.53
NAF1-201ENST00000274054 CCER1Q8TC90 406 aaPredicted RBP24.55■■□□□ 1.52
NAF1-201ENST00000274054 KIF21BO75037 1637 aa24.51■■□□□ 1.51
NAF1-201ENST00000274054 LAMC3Q9Y6N6 1575 aa24.51■■□□□ 1.51
NAF1-201ENST00000274054 UBTFP17480 764 aaKnown RBP24.49■■□□□ 1.51
NAF1-201ENST00000274054 FANCD2Q9BXW9 1451 aa24.49■■□□□ 1.51
NAF1-201ENST00000274054 CEP164Q9UPV0 1460 aa24.49■■□□□ 1.51
NAF1-201ENST00000274054 NESP48681 1621 aa24.45■■□□□ 1.5
NAF1-201ENST00000274054 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.44■■□□□ 1.5
NAF1-201ENST00000274054 DNMBPQ6XZF7 1577 aa24.35■■□□□ 1.49
NAF1-201ENST00000274054 KIF27Q86VH2 1401 aa24.35■■□□□ 1.49
NAF1-201ENST00000274054 DNAJC5BQ9UF47 199 aa24.34■■□□□ 1.49
NAF1-201ENST00000274054 FGD5Q6ZNL6 1462 aa24.33■■□□□ 1.49
NAF1-201ENST00000274054 ERICH3Q5RHP9 1530 aa24.29■■□□□ 1.48
NAF1-201ENST00000274054 RAPGEF2Q9Y4G8 1499 aa24.28■■□□□ 1.48
NAF1-201ENST00000274054 PDS5BQ9NTI5 1447 aa24.27■■□□□ 1.48
NAF1-201ENST00000274054 TOPBP1Q92547 1522 aa24.27■■□□□ 1.48
NAF1-201ENST00000274054 PRXQ9BXM0 1461 aa24.26■■□□□ 1.47
NAF1-201ENST00000274054 CLIP1P30622 1438 aa24.26■■□□□ 1.47
NAF1-201ENST00000274054 VPS8Q8N3P4 1428 aa24.22■■□□□ 1.47
NAF1-201ENST00000274054 CUX2O14529 1486 aa24.22■■□□□ 1.47
NAF1-201ENST00000274054 KIF21AQ7Z4S6 1674 aa24.22■■□□□ 1.47
NAF1-201ENST00000274054 URB2Q14146 1524 aaKnown RBP24.18■■□□□ 1.46
NAF1-201ENST00000274054 POLA1P09884 1462 aaPredicted RBP24.17■■□□□ 1.46
NAF1-201ENST00000274054 PELP1Q8IZL8 1130 aaKnown RBP24.15■■□□□ 1.46
NAF1-201ENST00000274054 APLP2Q06481 763 aa24.13■■□□□ 1.45
NAF1-201ENST00000274054 DIEXFQ68CQ4 756 aaKnown RBP24.13■■□□□ 1.45
NAF1-201ENST00000274054 ABCA10Q8WWZ4 1543 aa24.13■■□□□ 1.45
NAF1-201ENST00000274054 IGF1RP08069 1367 aa24.09■■□□□ 1.45
NAF1-201ENST00000274054 TTBK1Q5TCY1 1321 aaPredicted RBP24.08■■□□□ 1.45
NAF1-201ENST00000274054 RAD54L2Q9Y4B4 1467 aa24.07■■□□□ 1.44
NAF1-201ENST00000274054 WDR97A6NE52 1622 aa24.07■■□□□ 1.44
NAF1-201ENST00000274054 SCAF1Q9H7N4 1312 aaKnown RBP24.07■■□□□ 1.44
NAF1-201ENST00000274054 ZNF316A6NFI3 1004 aaPredicted RBP24.02■■□□□ 1.44
NAF1-201ENST00000274054 CENPBP07199 599 aaPredicted RBP24■■□□□ 1.43
NAF1-201ENST00000274054 ACIN1Q9UKV3 1341 aaKnown RBP24■■□□□ 1.43
NAF1-201ENST00000274054 CARMIL1Q5VZK9 1371 aa23.98■■□□□ 1.43
NAF1-201ENST00000274054 MRC2Q9UBG0 1479 aa23.96■■□□□ 1.43
NAF1-201ENST00000274054 CUL7Q14999 1698 aa23.94■■□□□ 1.42
NAF1-201ENST00000274054 ABCA5Q8WWZ7 1642 aa23.94■■□□□ 1.42
NAF1-201ENST00000274054 CLSPNQ9HAW4 1339 aa23.93■■□□□ 1.42
NAF1-201ENST00000274054 TARBP1Q13395 1621 aaKnown RBP23.91■■□□□ 1.42
NAF1-201ENST00000274054 HNRNPUL2Q1KMD3 747 aaKnown RBP23.87■■□□□ 1.41
NAF1-201ENST00000274054 WDR62O43379 1518 aa23.84■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms