RNA–Protein interactions for RNA: ENST00000396182.6

PDE1C-202, Transcript of phosphodiesterase 1C, humanhuman

TSL 1 (best) BASIC

Gene PDE1C, Length 2,420 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1C-202ENST00000396182 NISCHQ9Y2I1 1504 aa32.51■■■□□ 2.79
PDE1C-202ENST00000396182 SHROOM4Q9ULL8 1493 aa27.97■■■□□ 2.07
PDE1C-202ENST00000396182 SUPT5HO00267 1087 aaKnown RBP27.53■■■□□ 2
PDE1C-202ENST00000396182 ZCCHC6Q5VYS8 1495 aaKnown RBP27.52■■■□□ 2
PDE1C-202ENST00000396182 CCDC180Q9P1Z9 1646 aa27.44■■□□□ 1.98
PDE1C-202ENST00000396182 DCAF8L2P0C7V8 631 aa27.02■■□□□ 1.92
PDE1C-202ENST00000396182 HRCP23327 699 aa26.9■■□□□ 1.9
PDE1C-202ENST00000396182 CHIC1Q5VXU3 224 aa26.85■■□□□ 1.89
PDE1C-202ENST00000396182 MYO15BQ96JP2 1530 aa26.8■■□□□ 1.88
PDE1C-202ENST00000396182 DCAF1Q9Y4B6 1507 aa26.61■■□□□ 1.85
PDE1C-202ENST00000396182 PCGF6Q9BYE7 350 aa26.43■■□□□ 1.82
PDE1C-202ENST00000396182 PPARGC1BQ86YN6 1023 aaKnown RBP26.26■■□□□ 1.79
PDE1C-202ENST00000396182 LOC105371045A0A1W2PR82 267 aa26.12■■□□□ 1.77
PDE1C-202ENST00000396182 ABCC9O60706 1549 aa25.98■■□□□ 1.75
PDE1C-202ENST00000396182 SCRIBQ14160 1630 aa25.86■■□□□ 1.73
PDE1C-202ENST00000396182 RSF1Q96T23 1441 aaPredicted RBP25.85■■□□□ 1.73
PDE1C-202ENST00000396182 TRIM26Q12899 539 aaPredicted RBP25.76■■□□□ 1.71
PDE1C-202ENST00000396182 TRIM41Q8WV44 630 aa25.59■■□□□ 1.69
PDE1C-202ENST00000396182 RB1CC1Q8TDY2 1594 aa25.58■■□□□ 1.68
PDE1C-202ENST00000396182 ZEB1P37275 1124 aaPredicted RBP25.46■■□□□ 1.67
PDE1C-202ENST00000396182 FAM9AQ8IZU1 332 aaPredicted RBP25.45■■□□□ 1.66
PDE1C-202ENST00000396182 CECR2Q9BXF3 1484 aa25.41■■□□□ 1.66
PDE1C-202ENST00000396182 PELP1Q8IZL8 1130 aaKnown RBP25.41■■□□□ 1.66
PDE1C-202ENST00000396182 NACADO15069 1562 aa25.37■■□□□ 1.65
PDE1C-202ENST00000396182 MROH2BQ7Z745 1585 aa25.32■■□□□ 1.64
PDE1C-202ENST00000396182 EHMT2Q96KQ7 1210 aa25.26■■□□□ 1.63
PDE1C-202ENST00000396182 SCAF1Q9H7N4 1312 aaKnown RBP25.22■■□□□ 1.63
PDE1C-202ENST00000396182 WIZO95785 1651 aa25.18■■□□□ 1.62
PDE1C-202ENST00000396182 BAZ1AQ9NRL2 1556 aaPredicted RBP24.98■■□□□ 1.59
PDE1C-202ENST00000396182 SLC24A1O60721 1099 aa24.98■■□□□ 1.59
PDE1C-202ENST00000396182 EIF4G1Q04637 1599 aaKnown RBP24.89■■□□□ 1.58
PDE1C-202ENST00000396182 TOP2AP11388 1531 aaKnown RBP24.74■■□□□ 1.55
PDE1C-202ENST00000396182 ACIN1Q9UKV3 1341 aaKnown RBP24.72■■□□□ 1.55
PDE1C-202ENST00000396182 ABCC8Q09428 1581 aa24.72■■□□□ 1.55
PDE1C-202ENST00000396182 CCDC88BA6NC98 1476 aa24.71■■□□□ 1.55
PDE1C-202ENST00000396182 SMARCA4P51532 1647 aa24.69■■□□□ 1.54
PDE1C-202ENST00000396182 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.64■■□□□ 1.54
PDE1C-202ENST00000396182 NEUROD1Q13562 356 aa24.64■■□□□ 1.54
PDE1C-202ENST00000396182 SMARCA2P51531 1590 aa24.64■■□□□ 1.53
PDE1C-202ENST00000396182 CCER1Q8TC90 406 aaPredicted RBP24.59■■□□□ 1.53
PDE1C-202ENST00000396182 UNC13AQ9UPW8 1703 aa24.57■■□□□ 1.52
PDE1C-202ENST00000396182 SOGA1O94964 1423 aa24.55■■□□□ 1.52
PDE1C-202ENST00000396182 WRNQ14191 1432 aaPredicted RBP eCLIP24.5■■□□□ 1.51
PDE1C-202ENST00000396182 CEP162Q5TB80 1403 aa24.49■■□□□ 1.51
PDE1C-202ENST00000396182 TTBK1Q5TCY1 1321 aaPredicted RBP24.49■■□□□ 1.51
PDE1C-202ENST00000396182 DIEXFQ68CQ4 756 aaKnown RBP24.47■■□□□ 1.51
PDE1C-202ENST00000396182 GTF3C3Q9Y5Q9 886 aa24.45■■□□□ 1.5
PDE1C-202ENST00000396182 CENPBP07199 599 aaPredicted RBP24.44■■□□□ 1.5
PDE1C-202ENST00000396182 RUSC2Q8N2Y8 1516 aa24.44■■□□□ 1.5
PDE1C-202ENST00000396182 TNIKQ9UKE5 1360 aa24.44■■□□□ 1.5
PDE1C-202ENST00000396182 CSRNP3Q8WYN3 585 aa24.42■■□□□ 1.5
PDE1C-202ENST00000396182 PABPN1Q86U42 306 aaKnown RBP eCLIP24.4■■□□□ 1.5
PDE1C-202ENST00000396182 UBTFP17480 764 aaKnown RBP24.36■■□□□ 1.49
PDE1C-202ENST00000396182 EEA1Q15075 1411 aa24.35■■□□□ 1.49
PDE1C-202ENST00000396182 MYT1Q01538 1121 aa24.31■■□□□ 1.48
PDE1C-202ENST00000396182 BICRAQ9NZM4 1560 aa24.29■■□□□ 1.48
PDE1C-202ENST00000396182 GOLGA3Q08378 1498 aa24.23■■□□□ 1.47
PDE1C-202ENST00000396182 PEG3Q9GZU2 1588 aa24.18■■□□□ 1.46
PDE1C-202ENST00000396182 SYNJ1O43426 1573 aa24.12■■□□□ 1.45
PDE1C-202ENST00000396182 ZNF316A6NFI3 1004 aaPredicted RBP24.11■■□□□ 1.45
PDE1C-202ENST00000396182 CEP164Q9UPV0 1460 aa24.07■■□□□ 1.44
PDE1C-202ENST00000396182 ATAD2BQ9ULI0 1458 aa24.05■■□□□ 1.44
PDE1C-202ENST00000396182 KIF21BO75037 1637 aa24.01■■□□□ 1.43
PDE1C-202ENST00000396182 CLIP1P30622 1438 aa24■■□□□ 1.43
PDE1C-202ENST00000396182 BAZ1BQ9UIG0 1483 aaKnown RBP23.97■■□□□ 1.43
PDE1C-202ENST00000396182 HNRNPUL2Q1KMD3 747 aaKnown RBP23.96■■□□□ 1.43
PDE1C-202ENST00000396182 YTHDC1Q96MU7 727 aaKnown RBP23.95■■□□□ 1.42
PDE1C-202ENST00000396182 RAPGEF2Q9Y4G8 1499 aa23.92■■□□□ 1.42
PDE1C-202ENST00000396182 VPS8Q8N3P4 1428 aa23.9■■□□□ 1.42
PDE1C-202ENST00000396182 RANGAP1P46060 587 aaPredicted RBP23.88■■□□□ 1.41
PDE1C-202ENST00000396182 MIER1Q8N108 512 aa23.88■■□□□ 1.41
PDE1C-202ENST00000396182 APLP2Q06481 763 aa23.82■■□□□ 1.4
PDE1C-202ENST00000396182 TOP2BQ02880 1626 aa23.77■■□□□ 1.4
PDE1C-202ENST00000396182 BIVM-ERCC5R4GMW8 1640 aa23.66■■□□□ 1.38
PDE1C-202ENST00000396182 PRXQ9BXM0 1461 aa23.64■■□□□ 1.37
PDE1C-202ENST00000396182 ERICH3Q5RHP9 1530 aa23.6■■□□□ 1.37
PDE1C-202ENST00000396182 ARAP1Q96P48 1450 aa23.58■■□□□ 1.37
PDE1C-202ENST00000396182 KANK4Q5T7N3 995 aaPredicted RBP23.57■■□□□ 1.36
PDE1C-202ENST00000396182 CUX1P39880 1505 aa23.54■■□□□ 1.36
PDE1C-202ENST00000396182 NCAPD3P42695 1498 aa23.52■■□□□ 1.36
PDE1C-202ENST00000396182 HMGXB3Q12766 1538 aa23.49■■□□□ 1.35
PDE1C-202ENST00000396182 CLSPNQ9HAW4 1339 aa23.49■■□□□ 1.35
PDE1C-202ENST00000396182 DHX57Q6P158 1386 aaKnown RBP23.48■■□□□ 1.35
PDE1C-202ENST00000396182 KIF27Q86VH2 1401 aa23.47■■□□□ 1.35
PDE1C-202ENST00000396182 SUPT16HQ9Y5B9 1047 aaKnown RBP23.41■■□□□ 1.34
PDE1C-202ENST00000396182 CFTRP13569 1480 aa23.41■■□□□ 1.34
PDE1C-202ENST00000396182 RRBP1Q9P2E9 1410 aaKnown RBP23.38■■□□□ 1.33
PDE1C-202ENST00000396182 ARHGAP35Q9NRY4 1499 aa23.36■■□□□ 1.33
PDE1C-202ENST00000396182 CCNB3Q8WWL7 1395 aa23.29■■□□□ 1.32
PDE1C-202ENST00000396182 ITGAEP38570 1179 aa23.26■■□□□ 1.31
PDE1C-202ENST00000396182 IGF1RP08069 1367 aa23.25■■□□□ 1.31
PDE1C-202ENST00000396182 CUX2O14529 1486 aa23.25■■□□□ 1.31
PDE1C-202ENST00000396182 TSHZ2Q9NRE2 1034 aa23.21■■□□□ 1.31
PDE1C-202ENST00000396182 CARMIL1Q5VZK9 1371 aa23.13■■□□□ 1.29
PDE1C-202ENST00000396182 RAB3GAP2Q9H2M9 1393 aa23.12■■□□□ 1.29
PDE1C-202ENST00000396182 CADPSQ9ULU8 1353 aa23.12■■□□□ 1.29
PDE1C-202ENST00000396182 PRDM2Q13029 1718 aa23.11■■□□□ 1.29
PDE1C-202ENST00000396182 TIAM1Q13009 1591 aa23.1■■□□□ 1.29
PDE1C-202ENST00000396182 FGD5Q6ZNL6 1462 aa23.09■■□□□ 1.29
PDE1C-202ENST00000396182 ANP32EQ9BTT0 268 aa23.08■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms