Protein–RNA interactions for Protein: Q9NRR4

DROSHA, Ribonuclease 3, humanhuman

Known RBP eCLIP

Length 1,374 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DROSHAQ9NRR4 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC22.7■■□□□ 1.221e-6■□□□□ 8.8
DROSHAQ9NRR4 CCDC57-214ENST00000582040 330 ntTSL 322.63■■□□□ 1.211e-6■□□□□ 8.8
DROSHAQ9NRR4 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.21e-6■□□□□ 8.8
DROSHAQ9NRR4 CBX5-206ENST00000618078 2627 ntTSL 222.48■■□□□ 1.192e-12■□□□□ 8.8
DROSHAQ9NRR4 RPL13-213ENST00000565571 568 ntTSL 222.39■■□□□ 1.184e-24■□□□□ 8.8
DROSHAQ9NRR4 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC22.33■■□□□ 1.174e-24■□□□□ 8.8
DROSHAQ9NRR4 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC22.12■■□□□ 1.131e-6■□□□□ 8.8
DROSHAQ9NRR4 SUGP2-212ENST00000598863 551 ntTSL 322.07■■□□□ 1.121e-6■□□□□ 8.8
DROSHAQ9NRR4 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC21.99■■□□□ 1.111e-6■□□□□ 8.8
DROSHAQ9NRR4 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC21.78■■□□□ 1.081e-6■□□□□ 8.8
DROSHAQ9NRR4 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC21.61■■□□□ 1.051e-6■□□□□ 8.8
DROSHAQ9NRR4 CYB561A3-216ENST00000540755 1494 ntTSL 1 (best)21.61■■□□□ 1.051e-6■□□□□ 8.8
DROSHAQ9NRR4 SUGP2-204ENST00000593795 747 ntTSL 521.13■□□□□ 0.971e-6■□□□□ 8.8
DROSHAQ9NRR4 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC21.07■□□□□ 0.961e-6■□□□□ 8.8
DROSHAQ9NRR4 FXR1-209ENST00000472339 2130 ntTSL 521.02■□□□□ 0.961e-6■□□□□ 8.8
DROSHAQ9NRR4 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.821e-6■□□□□ 8.8
DROSHAQ9NRR4 HDLBP-210ENST00000423693 544 ntTSL 519.86■□□□□ 0.772e-7■□□□□ 8.8
DROSHAQ9NRR4 LSM2-209ENST00000470083 641 ntTSL 219.79■□□□□ 0.762e-12■□□□□ 8.8
DROSHAQ9NRR4 HRAS-210ENST00000482021 167 ntTSL 319.75■□□□□ 0.751e-6■□□□□ 8.8
DROSHAQ9NRR4 CYB561A3-206ENST00000536452 1827 ntTSL 219.45■□□□□ 0.71e-6■□□□□ 8.8
DROSHAQ9NRR4 BCAT2-211ENST00000601496 589 ntTSL 419.23■□□□□ 0.671e-6■□□□□ 8.8
DROSHAQ9NRR4 HDLBP-246ENST00000496569 374 ntTSL 418.79■□□□□ 0.62e-7■□□□□ 8.8
DROSHAQ9NRR4 NDUFA5-206ENST00000470123 459 ntTSL 218.69■□□□□ 0.581e-6■□□□□ 8.8
DROSHAQ9NRR4 ASIC4-204ENST00000473709 613 ntTSL 218.2■□□□□ 0.51e-6■□□□□ 8.8
DROSHAQ9NRR4 HDLBP-204ENST00000391976 4489 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.462e-7■□□□□ 8.8
DROSHAQ9NRR4 FXR1-220ENST00000491062 1768 ntTSL 2 BASIC17.73■□□□□ 0.431e-6■□□□□ 8.8
DROSHAQ9NRR4 CYB561A3-215ENST00000540317 1557 ntTSL 317.73■□□□□ 0.431e-6■□□□□ 8.8
DROSHAQ9NRR4 ASIC4-203ENST00000461395 3340 ntTSL 1 (best)17.71■□□□□ 0.431e-6■□□□□ 8.8
DROSHAQ9NRR4 MID1IP1-204ENST00000614558 3781 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.41e-6■□□□□ 8.8
DROSHAQ9NRR4 FXR1-208ENST00000469882 570 ntTSL 317.38■□□□□ 0.371e-6■□□□□ 8.8
DROSHAQ9NRR4 HDLBP-224ENST00000452065 996 ntTSL 517.11■□□□□ 0.332e-7■□□□□ 8.8
DROSHAQ9NRR4 HDLBP-207ENST00000420451 559 ntTSL 416.89■□□□□ 0.292e-7■□□□□ 8.8
DROSHAQ9NRR4 HDLBP-227ENST00000458564 420 ntTSL 316.62■□□□□ 0.252e-7■□□□□ 8.8
DROSHAQ9NRR4 FXR1-201ENST00000305586 3277 ntTSL 5 BASIC16.59■□□□□ 0.251e-6■□□□□ 8.8
DROSHAQ9NRR4 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.231e-6■□□□□ 8.8
DROSHAQ9NRR4 FXR1-213ENST00000479176 541 ntTSL 216.29■□□□□ 0.21e-6■□□□□ 8.8
DROSHAQ9NRR4 RAP1GAP-205ENST00000374763 3334 ntTSL 1 (best) BASIC16.29■□□□□ 0.21e-6■□□□□ 8.8
DROSHAQ9NRR4 RAP1GAP-209ENST00000471600 3238 ntTSL 516.16■□□□□ 0.181e-6■□□□□ 8.8
DROSHAQ9NRR4 HDLBP-213ENST00000427007 459 ntTSL 316.12■□□□□ 0.172e-7■□□□□ 8.8
DROSHAQ9NRR4 HDLBP-217ENST00000430918 612 ntTSL 316.12■□□□□ 0.172e-7■□□□□ 8.8
DROSHAQ9NRR4 SUGP2-203ENST00000452918 6176 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.171e-6■□□□□ 8.8
DROSHAQ9NRR4 HDLBP-219ENST00000442714 569 ntTSL 416■□□□□ 0.152e-7■□□□□ 8.8
DROSHAQ9NRR4 FXR1-211ENST00000475315 2341 ntTSL 215.91■□□□□ 0.141e-6■□□□□ 8.8
DROSHAQ9NRR4 CCDC57-205ENST00000392346 2964 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.131e-6■□□□□ 8.8
DROSHAQ9NRR4 HDLBP-230ENST00000462130 464 ntTSL 415.86■□□□□ 0.132e-7■□□□□ 8.8
DROSHAQ9NRR4 HDLBP-205ENST00000413241 581 ntTSL 515.85■□□□□ 0.132e-7■□□□□ 8.8
DROSHAQ9NRR4 HDLBP-206ENST00000417540 525 ntTSL 415.77■□□□□ 0.122e-7■□□□□ 8.8
DROSHAQ9NRR4 HDLBP-216ENST00000428482 1096 ntTSL 515.77■□□□□ 0.122e-7■□□□□ 8.8
DROSHAQ9NRR4 CYB561A3-201ENST00000294072 3061 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.091e-6■□□□□ 8.8
DROSHAQ9NRR4 RPL13-201ENST00000311528 4498 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.054e-24■□□□□ 8.8
DROSHAQ9NRR4 BCAT2-206ENST00000596981 569 ntTSL 415.34■□□□□ 0.051e-6■□□□□ 8.8
DROSHAQ9NRR4 HDLBP-214ENST00000427183 6238 ntTSL 2 BASIC15.14■□□□□ 0.012e-7■□□□□ 8.8
DROSHAQ9NRR4 FXR1-207ENST00000468861 1989 ntTSL 2 BASIC14.82□□□□□ -0.041e-6■□□□□ 8.8
DROSHAQ9NRR4 CYB561A3-202ENST00000426130 3205 ntTSL 5 BASIC14.81□□□□□ -0.041e-6■□□□□ 8.8
DROSHAQ9NRR4 HDLBP-211ENST00000425989 530 ntTSL 514.57□□□□□ -0.082e-7■□□□□ 8.8
DROSHAQ9NRR4 PPM1A-205ENST00000528241 564 ntTSL 514.33□□□□□ -0.121e-6■□□□□ 8.8
DROSHAQ9NRR4 HDLBP-203ENST00000391975 6372 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.122e-7■□□□□ 8.8
DROSHAQ9NRR4 FXR1-206ENST00000465551 572 ntTSL 414.14□□□□□ -0.151e-6■□□□□ 8.8
DROSHAQ9NRR4 PPM1A-201ENST00000325642 1713 ntTSL 2 BASIC14.09□□□□□ -0.151e-6■□□□□ 8.8
DROSHAQ9NRR4 SUGP2-206ENST00000594773 4169 ntTSL 213.9□□□□□ -0.181e-6■□□□□ 8.8
DROSHAQ9NRR4 FXR1-203ENST00000445140 2651 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.211e-6■□□□□ 8.8
DROSHAQ9NRR4 PPM1A-202ENST00000325658 4125 ntTSL 1 (best) BASIC13.64□□□□□ -0.231e-6■□□□□ 8.8
DROSHAQ9NRR4 SNRPE-202ENST00000414487 942 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.242e-12■□□□□ 8.8
DROSHAQ9NRR4 TERF2-208ENST00000567841 554 ntTSL 413.44□□□□□ -0.261e-6■□□□□ 8.8
DROSHAQ9NRR4 HDLBP-201ENST00000310931 4571 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.272e-7■□□□□ 8.8
DROSHAQ9NRR4 SUGP2-201ENST00000330854 3629 ntTSL 1 (best)13.31□□□□□ -0.281e-6■□□□□ 8.8
DROSHAQ9NRR4 SNRPE-205ENST00000475035 532 ntTSL 1 (best)13.29□□□□□ -0.282e-12■□□□□ 8.8
DROSHAQ9NRR4 CYB561A3-221ENST00000546151 3986 ntTSL 3 BASIC12.63□□□□□ -0.391e-6■□□□□ 8.8
DROSHAQ9NRR4 PPM1A-206ENST00000531143 1546 ntTSL 1 (best)12.23□□□□□ -0.451e-6■□□□□ 8.8
DROSHAQ9NRR4 HDLBP-222ENST00000449504 566 ntTSL 511.93□□□□□ -0.52e-7■□□□□ 8.8
DROSHAQ9NRR4 GPBP1-208ENST00000514387 3310 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.51e-6■□□□□ 8.8
DROSHAQ9NRR4 ELF2-210ENST00000512627 611 ntTSL 211.44□□□□□ -0.581e-6■□□□□ 8.8
DROSHAQ9NRR4 FXR1-202ENST00000357559 8711 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.61e-6■□□□□ 8.8
DROSHAQ9NRR4 GPBP1-203ENST00000424459 4683 ntAPPRIS ALT2 TSL 5 BASIC9.8□□□□□ -0.841e-6■□□□□ 8.8
DROSHAQ9NRR4 ZNF529-AS1-204ENST00000592880 452 ntTSL 28.24□□□□□ -1.091e-6■□□□□ 8.8
DROSHAQ9NRR4 SNRPE-204ENST00000470492 478 ntTSL 38.13□□□□□ -1.112e-12■□□□□ 8.8
DROSHAQ9NRR4 PPM1A-208ENST00000532036 1561 ntTSL 57.37□□□□□ -1.231e-6■□□□□ 8.8
DROSHAQ9NRR4 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.232e-12■□□□□ 8.8
DROSHAQ9NRR4 FXR1-219ENST00000484958 824 ntTSL 36.18□□□□□ -1.421e-6■□□□□ 8.8
DROSHAQ9NRR4 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC6.14□□□□□ -1.431e-6■□□□□ 8.8
DROSHAQ9NRR4 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC5.54□□□□□ -1.521e-6■□□□□ 8.8
DROSHAQ9NRR4 FXR1-218ENST00000484790 571 ntTSL 45.31□□□□□ -1.561e-6■□□□□ 8.8
DROSHAQ9NRR4 SUGP2-208ENST00000597163 423 ntTSL 34.88□□□□□ -1.631e-6■□□□□ 8.8
DROSHAQ9NRR4 NDUFA5-202ENST00000378795 1360 ntTSL 24.08□□□□□ -1.761e-6■□□□□ 8.8
DROSHAQ9NRR4 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.81e-6■□□□□ 8.8
DROSHAQ9NRR4 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.351e-6■□□□□ 8.7
DROSHAQ9NRR4 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.792e-20■□□□□ 8.7
DROSHAQ9NRR4 ATP5G3-204ENST00000472782 686 ntTSL 222.68■■□□□ 1.222e-20■□□□□ 8.7
DROSHAQ9NRR4 ATP5G3-205ENST00000497075 1313 ntTSL 221■□□□□ 0.952e-20■□□□□ 8.7
DROSHAQ9NRR4 ATP5G3-203ENST00000409194 795 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.182e-20■□□□□ 8.7
DROSHAQ9NRR4 ATP5G3-201ENST00000284727 5484 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.652e-20■□□□□ 8.7
DROSHAQ9NRR4 EIF5-211ENST00000559532 678 ntTSL 438.83■■■■□ 3.815e-6■□□□□ 8.7
DROSHAQ9NRR4 COL9A3-211ENST00000477612 635 ntTSL 333.5■■■□□ 2.955e-6■□□□□ 8.7
DROSHAQ9NRR4 EIF5-209ENST00000559130 583 ntTSL 332.69■■■□□ 2.825e-6■□□□□ 8.7
DROSHAQ9NRR4 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.645e-6■□□□□ 8.7
DROSHAQ9NRR4 EIF5-215ENST00000560763 723 ntTSL 228.85■■■□□ 2.215e-6■□□□□ 8.7
DROSHAQ9NRR4 CYP2W1-203ENST00000415893 890 ntTSL 327.86■■■□□ 2.055e-6■□□□□ 8.7
DROSHAQ9NRR4 EIF5-214ENST00000560338 580 ntTSL 326.87■■□□□ 1.895e-6■□□□□ 8.7
DROSHAQ9NRR4 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC26.17■■□□□ 1.785e-6■□□□□ 8.7
DROSHAQ9NRR4 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.75e-6■□□□□ 8.7
Retrieved 100 of 16,331 protein–RNA pairs in 571.7 ms