RNA–Protein interactions for RNA: ENST00000618078.1

CBX5-206, Transcript of chromobox 5, humanhuman

TSL 2

Gene CBX5, Length 2,627 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX5-206ENST00000618078 NISCHQ9Y2I1 1504 aa33.4■■■□□ 2.94
CBX5-206ENST00000618078 CCDC180Q9P1Z9 1646 aa28.81■■■□□ 2.2
CBX5-206ENST00000618078 ZCCHC6Q5VYS8 1495 aaKnown RBP28.14■■■□□ 2.1
CBX5-206ENST00000618078 SHROOM4Q9ULL8 1493 aa27.83■■■□□ 2.05
CBX5-206ENST00000618078 DCAF8L2P0C7V8 631 aa27.67■■■□□ 2.02
CBX5-206ENST00000618078 DCAF1Q9Y4B6 1507 aa27.46■■□□□ 1.99
CBX5-206ENST00000618078 ABCC9O60706 1549 aa27.13■■□□□ 1.93
CBX5-206ENST00000618078 MYO15BQ96JP2 1530 aa26.93■■□□□ 1.9
CBX5-206ENST00000618078 SUPT5HO00267 1087 aaKnown RBP26.93■■□□□ 1.9
CBX5-206ENST00000618078 SCRIBQ14160 1630 aa26.79■■□□□ 1.88
CBX5-206ENST00000618078 NACADO15069 1562 aa26.74■■□□□ 1.87
CBX5-206ENST00000618078 RB1CC1Q8TDY2 1594 aa26.45■■□□□ 1.82
CBX5-206ENST00000618078 RSF1Q96T23 1441 aaPredicted RBP26.12■■□□□ 1.77
CBX5-206ENST00000618078 UNC13AQ9UPW8 1703 aa26.1■■□□□ 1.77
CBX5-206ENST00000618078 CECR2Q9BXF3 1484 aa26.06■■□□□ 1.76
CBX5-206ENST00000618078 MROH2BQ7Z745 1585 aa25.92■■□□□ 1.74
CBX5-206ENST00000618078 CHIC1Q5VXU3 224 aa25.91■■□□□ 1.74
CBX5-206ENST00000618078 BICRAQ9NZM4 1560 aa25.77■■□□□ 1.72
CBX5-206ENST00000618078 WIZO95785 1651 aa25.75■■□□□ 1.71
CBX5-206ENST00000618078 PABPN1Q86U42 306 aaKnown RBP eCLIP25.73■■□□□ 1.71
CBX5-206ENST00000618078 BAZ1AQ9NRL2 1556 aaPredicted RBP25.71■■□□□ 1.71
CBX5-206ENST00000618078 SMARCA4P51532 1647 aa25.61■■□□□ 1.69
CBX5-206ENST00000618078 TOP2AP11388 1531 aaKnown RBP25.36■■□□□ 1.65
CBX5-206ENST00000618078 SMARCA2P51531 1590 aa25.2■■□□□ 1.63
CBX5-206ENST00000618078 CCDC88BA6NC98 1476 aa25.19■■□□□ 1.62
CBX5-206ENST00000618078 EIF4G1Q04637 1599 aaKnown RBP25.18■■□□□ 1.62
CBX5-206ENST00000618078 PEG3Q9GZU2 1588 aa25.18■■□□□ 1.62
CBX5-206ENST00000618078 TRIM41Q8WV44 630 aa25.16■■□□□ 1.62
CBX5-206ENST00000618078 ATAD2BQ9ULI0 1458 aa25.08■■□□□ 1.61
CBX5-206ENST00000618078 LOC105371045A0A1W2PR82 267 aa25.06■■□□□ 1.6
CBX5-206ENST00000618078 BAZ1BQ9UIG0 1483 aaKnown RBP24.96■■□□□ 1.59
CBX5-206ENST00000618078 ABCC8Q09428 1581 aa24.9■■□□□ 1.58
CBX5-206ENST00000618078 FAM9AQ8IZU1 332 aaPredicted RBP24.89■■□□□ 1.58
CBX5-206ENST00000618078 NCAPD3P42695 1498 aa24.71■■□□□ 1.55
CBX5-206ENST00000618078 HMGXB3Q12766 1538 aa24.7■■□□□ 1.54
CBX5-206ENST00000618078 EHMT2Q96KQ7 1210 aa24.66■■□□□ 1.54
CBX5-206ENST00000618078 WRNQ14191 1432 aaPredicted RBP eCLIP24.55■■□□□ 1.52
CBX5-206ENST00000618078 SYNJ1O43426 1573 aa24.51■■□□□ 1.51
CBX5-206ENST00000618078 SOGA1O94964 1423 aa24.5■■□□□ 1.51
CBX5-206ENST00000618078 CC2D2AQ9P2K1 1620 aa24.49■■□□□ 1.51
CBX5-206ENST00000618078 RUSC2Q8N2Y8 1516 aa24.43■■□□□ 1.5
CBX5-206ENST00000618078 PCGF6Q9BYE7 350 aa24.33■■□□□ 1.49
CBX5-206ENST00000618078 CFTRP13569 1480 aa24.32■■□□□ 1.48
CBX5-206ENST00000618078 EEA1Q15075 1411 aa24.28■■□□□ 1.48
CBX5-206ENST00000618078 TOP2BQ02880 1626 aa24.28■■□□□ 1.48
CBX5-206ENST00000618078 CSRNP3Q8WYN3 585 aa24.26■■□□□ 1.47
CBX5-206ENST00000618078 BIVM-ERCC5R4GMW8 1640 aa24.23■■□□□ 1.47
CBX5-206ENST00000618078 PRDM2Q13029 1718 aa24.2■■□□□ 1.46
CBX5-206ENST00000618078 CUX1P39880 1505 aa24.18■■□□□ 1.46
CBX5-206ENST00000618078 CADPSQ9ULU8 1353 aa24.16■■□□□ 1.46
CBX5-206ENST00000618078 GOLGA3Q08378 1498 aa24.09■■□□□ 1.45
CBX5-206ENST00000618078 TNIKQ9UKE5 1360 aa24.08■■□□□ 1.45
CBX5-206ENST00000618078 CEP162Q5TB80 1403 aa24.06■■□□□ 1.44
CBX5-206ENST00000618078 TRIM26Q12899 539 aaPredicted RBP24.06■■□□□ 1.44
CBX5-206ENST00000618078 UBTFP17480 764 aaKnown RBP24.05■■□□□ 1.44
CBX5-206ENST00000618078 KIF21BO75037 1637 aa24.04■■□□□ 1.44
CBX5-206ENST00000618078 CEP164Q9UPV0 1460 aa24.02■■□□□ 1.44
CBX5-206ENST00000618078 NESP48681 1621 aa23.98■■□□□ 1.43
CBX5-206ENST00000618078 DNAJC5BQ9UF47 199 aa23.97■■□□□ 1.43
CBX5-206ENST00000618078 RAPGEF2Q9Y4G8 1499 aa23.95■■□□□ 1.42
CBX5-206ENST00000618078 PPARGC1BQ86YN6 1023 aaKnown RBP23.95■■□□□ 1.42
CBX5-206ENST00000618078 FANCD2Q9BXW9 1451 aa23.94■■□□□ 1.42
CBX5-206ENST00000618078 HRCP23327 699 aa23.88■■□□□ 1.41
CBX5-206ENST00000618078 KIF27Q86VH2 1401 aa23.85■■□□□ 1.41
CBX5-206ENST00000618078 FGD5Q6ZNL6 1462 aa23.84■■□□□ 1.41
CBX5-206ENST00000618078 PRXQ9BXM0 1461 aa23.82■■□□□ 1.4
CBX5-206ENST00000618078 LAMC3Q9Y6N6 1575 aa23.8■■□□□ 1.4
CBX5-206ENST00000618078 CUX2O14529 1486 aa23.78■■□□□ 1.4
CBX5-206ENST00000618078 ERICH3Q5RHP9 1530 aa23.77■■□□□ 1.4
CBX5-206ENST00000618078 CLIP1P30622 1438 aa23.76■■□□□ 1.39
CBX5-206ENST00000618078 DNMBPQ6XZF7 1577 aa23.75■■□□□ 1.39
CBX5-206ENST00000618078 TOPBP1Q92547 1522 aa23.73■■□□□ 1.39
CBX5-206ENST00000618078 RANGAP1P46060 587 aaPredicted RBP23.72■■□□□ 1.39
CBX5-206ENST00000618078 TTBK1Q5TCY1 1321 aaPredicted RBP23.7■■□□□ 1.38
CBX5-206ENST00000618078 RAD54L2Q9Y4B4 1467 aa23.67■■□□□ 1.38
CBX5-206ENST00000618078 POLA1P09884 1462 aaPredicted RBP23.66■■□□□ 1.38
CBX5-206ENST00000618078 URB2Q14146 1524 aaKnown RBP23.65■■□□□ 1.38
CBX5-206ENST00000618078 IGF1RP08069 1367 aa23.65■■□□□ 1.38
CBX5-206ENST00000618078 KIF21AQ7Z4S6 1674 aa23.63■■□□□ 1.37
CBX5-206ENST00000618078 PDS5BQ9NTI5 1447 aa23.61■■□□□ 1.37
CBX5-206ENST00000618078 VPS8Q8N3P4 1428 aa23.58■■□□□ 1.37
CBX5-206ENST00000618078 ABCA10Q8WWZ4 1543 aa23.57■■□□□ 1.36
CBX5-206ENST00000618078 CARMIL1Q5VZK9 1371 aa23.53■■□□□ 1.36
CBX5-206ENST00000618078 ARAP1Q96P48 1450 aa23.51■■□□□ 1.35
CBX5-206ENST00000618078 WDR97A6NE52 1622 aa23.49■■□□□ 1.35
CBX5-206ENST00000618078 ARHGAP35Q9NRY4 1499 aa23.42■■□□□ 1.34
CBX5-206ENST00000618078 TDRD9Q8NDG6 1382 aaKnown RBP23.39■■□□□ 1.33
CBX5-206ENST00000618078 ABCA5Q8WWZ7 1642 aa23.37■■□□□ 1.33
CBX5-206ENST00000618078 CUL7Q14999 1698 aa23.34■■□□□ 1.33
CBX5-206ENST00000618078 APLP2Q06481 763 aa23.33■■□□□ 1.33
CBX5-206ENST00000618078 TARBP1Q13395 1621 aaKnown RBP23.33■■□□□ 1.33
CBX5-206ENST00000618078 MRC2Q9UBG0 1479 aa23.32■■□□□ 1.32
CBX5-206ENST00000618078 GAPVD1Q14C86 1478 aa23.31■■□□□ 1.32
CBX5-206ENST00000618078 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.24■■□□□ 1.31
CBX5-206ENST00000618078 CTTNBP2Q8WZ74 1663 aa23.21■■□□□ 1.31
CBX5-206ENST00000618078 KANK4Q5T7N3 995 aaPredicted RBP23.21■■□□□ 1.31
CBX5-206ENST00000618078 ZEB1P37275 1124 aaPredicted RBP23.19■■□□□ 1.3
CBX5-206ENST00000618078 WDR62O43379 1518 aa23.18■■□□□ 1.3
CBX5-206ENST00000618078 P3H3Q8IVL6 736 aa23.17■■□□□ 1.3
CBX5-206ENST00000618078 AQRO60306 1485 aaKnown RBP eCLIP23.17■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms