RNA–Protein interactions for RNA: ENST00000514387.6

GPBP1-208, Transcript of GC-rich promoter binding protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GPBP1, Length 3,310 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPBP1-208ENST00000514387 NISCHQ9Y2I1 1504 aa16.03■□□□□ 0.16
GPBP1-208ENST00000514387 PELP1Q8IZL8 1130 aaKnown RBP15.8■□□□□ 0.12
GPBP1-208ENST00000514387 MYT1Q01538 1121 aa15.71■□□□□ 0.11
GPBP1-208ENST00000514387 TTBK1Q5TCY1 1321 aaPredicted RBP15.35■□□□□ 0.05
GPBP1-208ENST00000514387 HRCP23327 699 aa14.81□□□□□ -0.04
GPBP1-208ENST00000514387 SLC24A1O60721 1099 aa14.63□□□□□ -0.07
GPBP1-208ENST00000514387 APLP2Q06481 763 aa14.62□□□□□ -0.07
GPBP1-208ENST00000514387 PRKCSHP14314 528 aaPredicted RBP14.59□□□□□ -0.07
GPBP1-208ENST00000514387 ERICH6Q7L0X2 663 aa14.43□□□□□ -0.1
GPBP1-208ENST00000514387 DCAF1Q9Y4B6 1507 aa14.22□□□□□ -0.13
GPBP1-208ENST00000514387 PCGF6Q9BYE7 350 aa14.14□□□□□ -0.15
GPBP1-208ENST00000514387 ZEB1P37275 1124 aaPredicted RBP14.12□□□□□ -0.15
GPBP1-208ENST00000514387 DAXXQ9UER7 740 aaPredicted RBP14.09□□□□□ -0.15
GPBP1-208ENST00000514387 PPARGC1BQ86YN6 1023 aaKnown RBP14.08□□□□□ -0.16
GPBP1-208ENST00000514387 CCDC180Q9P1Z9 1646 aa14.07□□□□□ -0.16
GPBP1-208ENST00000514387 MYO15BQ96JP2 1530 aa14.04□□□□□ -0.16
GPBP1-208ENST00000514387 BCL11AQ9H165 835 aa14.02□□□□□ -0.17
GPBP1-208ENST00000514387 CHIC1Q5VXU3 224 aa14.01□□□□□ -0.17
GPBP1-208ENST00000514387 SCAF1Q9H7N4 1312 aaKnown RBP13.95□□□□□ -0.18
GPBP1-208ENST00000514387 TRIM26Q12899 539 aaPredicted RBP13.94□□□□□ -0.18
GPBP1-208ENST00000514387 SUPT5HO00267 1087 aaKnown RBP13.9□□□□□ -0.18
GPBP1-208ENST00000514387 FAM9AQ8IZU1 332 aaPredicted RBP13.82□□□□□ -0.2
GPBP1-208ENST00000514387 SHROOM4Q9ULL8 1493 aa13.79□□□□□ -0.2
GPBP1-208ENST00000514387 ZCCHC6Q5VYS8 1495 aaKnown RBP13.72□□□□□ -0.21
GPBP1-208ENST00000514387 ACIN1Q9UKV3 1341 aaKnown RBP13.72□□□□□ -0.21
GPBP1-208ENST00000514387 CENPBP07199 599 aaPredicted RBP13.63□□□□□ -0.23
GPBP1-208ENST00000514387 NEUROD1Q13562 356 aa13.49□□□□□ -0.25
GPBP1-208ENST00000514387 GTF3C3Q9Y5Q9 886 aa13.46□□□□□ -0.25
GPBP1-208ENST00000514387 LOC105371045A0A1W2PR82 267 aa13.44□□□□□ -0.26
GPBP1-208ENST00000514387 EIF5BO60841 1220 aaKnown RBP13.42□□□□□ -0.26
GPBP1-208ENST00000514387 CLSPNQ9HAW4 1339 aa13.31□□□□□ -0.28
GPBP1-208ENST00000514387 DIEXFQ68CQ4 756 aaKnown RBP13.3□□□□□ -0.28
GPBP1-208ENST00000514387 UBE2Q2Q8WVN8 375 aa13.29□□□□□ -0.28
GPBP1-208ENST00000514387 ANP32EQ9BTT0 268 aa13.28□□□□□ -0.28
GPBP1-208ENST00000514387 TRIM41Q8WV44 630 aa13.19□□□□□ -0.3
GPBP1-208ENST00000514387 CCER1Q8TC90 406 aaPredicted RBP13.13□□□□□ -0.31
GPBP1-208ENST00000514387 ZNF316A6NFI3 1004 aaPredicted RBP13.1□□□□□ -0.31
GPBP1-208ENST00000514387 NCBP3Q53F19 620 aaKnown RBP13.08□□□□□ -0.32
GPBP1-208ENST00000514387 ABCC9O60706 1549 aa13.07□□□□□ -0.32
GPBP1-208ENST00000514387 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13□□□□□ -0.33
GPBP1-208ENST00000514387 WRNQ14191 1432 aaPredicted RBP eCLIP12.99□□□□□ -0.33
GPBP1-208ENST00000514387 CSRNP3Q8WYN3 585 aa12.99□□□□□ -0.33
GPBP1-208ENST00000514387 RB1CC1Q8TDY2 1594 aa12.96□□□□□ -0.33
GPBP1-208ENST00000514387 PLEKHG5O94827 1062 aa12.95□□□□□ -0.34
GPBP1-208ENST00000514387 ARXQ96QS3 562 aa12.92□□□□□ -0.34
GPBP1-208ENST00000514387 RSF1Q96T23 1441 aaPredicted RBP12.88□□□□□ -0.35
GPBP1-208ENST00000514387 MIER1Q8N108 512 aa12.85□□□□□ -0.35
GPBP1-208ENST00000514387 TSHZ2Q9NRE2 1034 aa12.85□□□□□ -0.35
GPBP1-208ENST00000514387 ANO8Q9HCE9 1232 aaPredicted RBP12.84□□□□□ -0.35
GPBP1-208ENST00000514387 SUPT16HQ9Y5B9 1047 aaKnown RBP12.84□□□□□ -0.35
GPBP1-208ENST00000514387 PODXL2Q9NZ53 605 aa12.84□□□□□ -0.35
GPBP1-208ENST00000514387 ERICH6BQ5W0A0 696 aa12.83□□□□□ -0.36
GPBP1-208ENST00000514387 YTHDC1Q96MU7 727 aaKnown RBP12.82□□□□□ -0.36
GPBP1-208ENST00000514387 PKNOX2Q96KN3 472 aa12.78□□□□□ -0.36
GPBP1-208ENST00000514387 MYT1LQ9UL68 1186 aa12.77□□□□□ -0.37
GPBP1-208ENST00000514387 DCAF8L2P0C7V8 631 aa12.73□□□□□ -0.37
GPBP1-208ENST00000514387 TNIKQ9UKE5 1360 aa12.69□□□□□ -0.38
GPBP1-208ENST00000514387 EEA1Q15075 1411 aa12.66□□□□□ -0.38
GPBP1-208ENST00000514387 CEP162Q5TB80 1403 aa12.65□□□□□ -0.38
GPBP1-208ENST00000514387 RANGAP1P46060 587 aaPredicted RBP12.63□□□□□ -0.39
GPBP1-208ENST00000514387 EIF4G1Q04637 1599 aaKnown RBP12.61□□□□□ -0.39
GPBP1-208ENST00000514387 NEFLP07196 543 aa12.54□□□□□ -0.4
GPBP1-208ENST00000514387 FANCIQ9NVI1 1328 aa12.54□□□□□ -0.4
GPBP1-208ENST00000514387 SALL2Q9Y467 1007 aaPredicted RBP12.54□□□□□ -0.4
GPBP1-208ENST00000514387 RBM19Q9Y4C8 960 aaKnown RBP12.53□□□□□ -0.4
GPBP1-208ENST00000514387 KLHL34Q8N239 644 aa12.52□□□□□ -0.4
GPBP1-208ENST00000514387 BAZ1AQ9NRL2 1556 aaPredicted RBP12.49□□□□□ -0.41
GPBP1-208ENST00000514387 PDIA4P13667 645 aaKnown RBP12.49□□□□□ -0.41
GPBP1-208ENST00000514387 GOLGA3Q08378 1498 aa12.47□□□□□ -0.41
GPBP1-208ENST00000514387 SCRIBQ14160 1630 aa12.44□□□□□ -0.42
GPBP1-208ENST00000514387 EHMT2Q96KQ7 1210 aa12.44□□□□□ -0.42
GPBP1-208ENST00000514387 PDE4CQ08493 712 aa12.4□□□□□ -0.42
GPBP1-208ENST00000514387 FGD1P98174 961 aa12.4□□□□□ -0.42
GPBP1-208ENST00000514387 FKBP8Q14318 412 aa12.39□□□□□ -0.43
GPBP1-208ENST00000514387 MROH2BQ7Z745 1585 aa12.39□□□□□ -0.43
GPBP1-208ENST00000514387 DHX57Q6P158 1386 aaKnown RBP12.39□□□□□ -0.43
GPBP1-208ENST00000514387 TIMELESSQ9UNS1 1208 aa12.38□□□□□ -0.43
GPBP1-208ENST00000514387 KIF21BO75037 1637 aa12.38□□□□□ -0.43
GPBP1-208ENST00000514387 VPS8Q8N3P4 1428 aa12.38□□□□□ -0.43
GPBP1-208ENST00000514387 CUX2O14529 1486 aa12.36□□□□□ -0.43
GPBP1-208ENST00000514387 BAZ1BQ9UIG0 1483 aaKnown RBP12.35□□□□□ -0.43
GPBP1-208ENST00000514387 CEP164Q9UPV0 1460 aa12.35□□□□□ -0.43
GPBP1-208ENST00000514387 CCER2I3L3R5 266 aa12.35□□□□□ -0.43
GPBP1-208ENST00000514387 MSH5O43196 834 aa12.35□□□□□ -0.43
GPBP1-208ENST00000514387 HNRNPUL2Q1KMD3 747 aaKnown RBP12.35□□□□□ -0.43
GPBP1-208ENST00000514387 CCDC88BA6NC98 1476 aa12.35□□□□□ -0.43
GPBP1-208ENST00000514387 WIZO95785 1651 aa12.34□□□□□ -0.43
GPBP1-208ENST00000514387 TOP2AP11388 1531 aaKnown RBP12.31□□□□□ -0.44
GPBP1-208ENST00000514387 CDK11AQ9UQ88 783 aaPredicted RBP12.31□□□□□ -0.44
GPBP1-208ENST00000514387 ABCC8Q09428 1581 aa12.31□□□□□ -0.44
GPBP1-208ENST00000514387 HOMEZQ8IX15 550 aa12.3□□□□□ -0.44
GPBP1-208ENST00000514387 CECR2Q9BXF3 1484 aa12.3□□□□□ -0.44
GPBP1-208ENST00000514387 NACADO15069 1562 aa12.3□□□□□ -0.44
GPBP1-208ENST00000514387 TAF7LQ5H9L4 462 aa12.29□□□□□ -0.44
GPBP1-208ENST00000514387 SOGA1O94964 1423 aa12.29□□□□□ -0.44
GPBP1-208ENST00000514387 CLIP1P30622 1438 aa12.29□□□□□ -0.44
GPBP1-208ENST00000514387 UBTFP17480 764 aaKnown RBP12.29□□□□□ -0.44
GPBP1-208ENST00000514387 DEKP35659 375 aaKnown RBP12.29□□□□□ -0.44
GPBP1-208ENST00000514387 RTN4Q9NQC3 1192 aaKnown RBP12.27□□□□□ -0.44
GPBP1-208ENST00000514387 BCANQ96GW7 911 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms