RNA–Protein interactions for RNA: ENST00000424459.7

GPBP1-203, Transcript of GC-rich promoter binding protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene GPBP1, Length 4,683 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPBP1-203ENST00000424459 DCAF8L2P0C7V8 631 aa14.89□□□□□ -0.03
GPBP1-203ENST00000424459 NISCHQ9Y2I1 1504 aa13.67□□□□□ -0.22
GPBP1-203ENST00000424459 FAM9AQ8IZU1 332 aaPredicted RBP13.41□□□□□ -0.26
GPBP1-203ENST00000424459 SUPT5HO00267 1087 aaKnown RBP13.21□□□□□ -0.3
GPBP1-203ENST00000424459 SHROOM4Q9ULL8 1493 aa13.05□□□□□ -0.32
GPBP1-203ENST00000424459 APLP2Q06481 763 aa12.86□□□□□ -0.35
GPBP1-203ENST00000424459 EHMT2Q96KQ7 1210 aa12.76□□□□□ -0.37
GPBP1-203ENST00000424459 ATP1B4Q9UN42 357 aaPredicted RBP12.65□□□□□ -0.38
GPBP1-203ENST00000424459 ABCC9O60706 1549 aa12.63□□□□□ -0.39
GPBP1-203ENST00000424459 MYT1LQ9UL68 1186 aa12.6□□□□□ -0.39
GPBP1-203ENST00000424459 RANGAP1P46060 587 aaPredicted RBP12.54□□□□□ -0.4
GPBP1-203ENST00000424459 PABPN1Q86U42 306 aaKnown RBP eCLIP12.53□□□□□ -0.4
GPBP1-203ENST00000424459 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.47□□□□□ -0.41
GPBP1-203ENST00000424459 HNRNPUL2Q1KMD3 747 aaKnown RBP12.47□□□□□ -0.41
GPBP1-203ENST00000424459 TTBK1Q5TCY1 1321 aaPredicted RBP12.47□□□□□ -0.41
GPBP1-203ENST00000424459 UBTFP17480 764 aaKnown RBP12.35□□□□□ -0.43
GPBP1-203ENST00000424459 TRIM41Q8WV44 630 aa12.34□□□□□ -0.43
GPBP1-203ENST00000424459 FBLN2P98095 1184 aa12.31□□□□□ -0.44
GPBP1-203ENST00000424459 CHIC1Q5VXU3 224 aa12.14□□□□□ -0.47
GPBP1-203ENST00000424459 NPM1P06748 294 aaKnown RBP eCLIP12.12□□□□□ -0.47
GPBP1-203ENST00000424459 ESF1Q9H501 851 aaKnown RBP12.03□□□□□ -0.48
GPBP1-203ENST00000424459 BCANQ96GW7 911 aa11.87□□□□□ -0.51
GPBP1-203ENST00000424459 PLPPR3Q6T4P5 718 aa11.83□□□□□ -0.52
GPBP1-203ENST00000424459 TRHP20396 242 aaPredicted RBP11.82□□□□□ -0.52
GPBP1-203ENST00000424459 ITGAEP38570 1179 aa11.8□□□□□ -0.52
GPBP1-203ENST00000424459 SLC4A1APQ9BWU0 796 aaKnown RBP11.8□□□□□ -0.52
GPBP1-203ENST00000424459 CHMP7Q8WUX9 453 aaPredicted RBP11.75□□□□□ -0.53
GPBP1-203ENST00000424459 CDK11AQ9UQ88 783 aaPredicted RBP11.75□□□□□ -0.53
GPBP1-203ENST00000424459 PCGF6Q9BYE7 350 aa11.74□□□□□ -0.53
GPBP1-203ENST00000424459 STAG3Q9UJ98 1225 aa11.7□□□□□ -0.54
GPBP1-203ENST00000424459 POLR3GLQ9BT43 218 aa11.69□□□□□ -0.54
GPBP1-203ENST00000424459 ERCC6Q03468 1493 aa11.66□□□□□ -0.54
GPBP1-203ENST00000424459 ARID3CA6NKF2 412 aa11.66□□□□□ -0.54
GPBP1-203ENST00000424459 SCRIBQ14160 1630 aa11.65□□□□□ -0.54
GPBP1-203ENST00000424459 PELP1Q8IZL8 1130 aaKnown RBP11.65□□□□□ -0.55
GPBP1-203ENST00000424459 CCER1Q8TC90 406 aaPredicted RBP11.63□□□□□ -0.55
GPBP1-203ENST00000424459 AEBP2Q6ZN18 517 aaPredicted RBP11.59□□□□□ -0.55
GPBP1-203ENST00000424459 FAM50AQ14320 339 aaKnown RBP11.59□□□□□ -0.55
GPBP1-203ENST00000424459 TRIM52Q96A61 297 aa11.59□□□□□ -0.55
GPBP1-203ENST00000424459 ZNF777Q9ULD5 760 aaPredicted RBP11.59□□□□□ -0.55
GPBP1-203ENST00000424459 ARID4BQ4LE39 1312 aaPredicted RBP11.58□□□□□ -0.56
GPBP1-203ENST00000424459 RB1CC1Q8TDY2 1594 aa11.58□□□□□ -0.56
GPBP1-203ENST00000424459 P3H3Q8IVL6 736 aa11.56□□□□□ -0.56
GPBP1-203ENST00000424459 PPARGC1BQ86YN6 1023 aaKnown RBP11.52□□□□□ -0.57
GPBP1-203ENST00000424459 CHGAP10645 457 aaKnown RBP11.51□□□□□ -0.57
GPBP1-203ENST00000424459 C14orf37Q86TY3 774 aa11.45□□□□□ -0.58
GPBP1-203ENST00000424459 KCNH8Q96L42 1107 aa11.44□□□□□ -0.58
GPBP1-203ENST00000424459 SLC24A1O60721 1099 aa11.44□□□□□ -0.58
GPBP1-203ENST00000424459 CNGB1Q14028 1251 aaPredicted RBP11.42□□□□□ -0.58
GPBP1-203ENST00000424459 SCAF1Q9H7N4 1312 aaKnown RBP11.41□□□□□ -0.58
GPBP1-203ENST00000424459 NEFMP07197 916 aa11.39□□□□□ -0.59
GPBP1-203ENST00000424459 ZNF326Q5BKZ1 582 aaKnown RBP11.39□□□□□ -0.59
GPBP1-203ENST00000424459 TSPY4P0CV99 314 aa11.39□□□□□ -0.59
GPBP1-203ENST00000424459 TSPY10P0CW01 314 aa11.39□□□□□ -0.59
GPBP1-203ENST00000424459 HAP1P54257 671 aaPredicted RBP11.36□□□□□ -0.59
GPBP1-203ENST00000424459 CSRNP3Q8WYN3 585 aa11.36□□□□□ -0.59
GPBP1-203ENST00000424459 PPP1R15AO75807 674 aaPredicted RBP11.36□□□□□ -0.59
GPBP1-203ENST00000424459 PLEKHD1A6NEE1 506 aa11.36□□□□□ -0.59
GPBP1-203ENST00000424459 A0A0G2JS52 829 aa11.35□□□□□ -0.59
GPBP1-203ENST00000424459 ZEB1P37275 1124 aaPredicted RBP11.33□□□□□ -0.6
GPBP1-203ENST00000424459 NACADO15069 1562 aa11.33□□□□□ -0.6
GPBP1-203ENST00000424459 NPM2Q86SE8 214 aaKnown RBP11.29□□□□□ -0.6
GPBP1-203ENST00000424459 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.29□□□□□ -0.61e-7■□□□□ 10.9
GPBP1-203ENST00000424459 NEFLP07196 543 aa11.26□□□□□ -0.61
GPBP1-203ENST00000424459 BAZ1BQ9UIG0 1483 aaKnown RBP11.25□□□□□ -0.61
GPBP1-203ENST00000424459 CCDC180Q9P1Z9 1646 aa11.25□□□□□ -0.61
GPBP1-203ENST00000424459 OSCARQ8IYS5 282 aa11.23□□□□□ -0.61
GPBP1-203ENST00000424459 PDS5BQ9NTI5 1447 aa11.23□□□□□ -0.61
GPBP1-203ENST00000424459 LOC105371045A0A1W2PR82 267 aa11.22□□□□□ -0.61
GPBP1-203ENST00000424459 MYT1Q01538 1121 aa11.22□□□□□ -0.61
GPBP1-203ENST00000424459 CYB5RLQ6IPT4 315 aa11.21□□□□□ -0.61
GPBP1-203ENST00000424459 MLECQ14165 292 aa11.21□□□□□ -0.62
GPBP1-203ENST00000424459 CECR2Q9BXF3 1484 aa11.19□□□□□ -0.62
GPBP1-203ENST00000424459 PLEKHG5O94827 1062 aa11.19□□□□□ -0.62
GPBP1-203ENST00000424459 NEUROD1Q13562 356 aa11.17□□□□□ -0.62
GPBP1-203ENST00000424459 ZBTB47Q9UFB7 747 aaPredicted RBP11.17□□□□□ -0.62
GPBP1-203ENST00000424459 SENP3Q9H4L4 574 aaPredicted RBP11.15□□□□□ -0.62
GPBP1-203ENST00000424459 HDGFP51858 240 aaKnown RBP11.15□□□□□ -0.63
GPBP1-203ENST00000424459 MTUS2Q5JR59 1369 aa11.14□□□□□ -0.63
GPBP1-203ENST00000424459 LMOD2Q6P5Q4 547 aa11.13□□□□□ -0.63
GPBP1-203ENST00000424459 ZCCHC6Q5VYS8 1495 aaKnown RBP11.12□□□□□ -0.63
GPBP1-203ENST00000424459 ZBTB7CA1YPR0 619 aa11.12□□□□□ -0.63
GPBP1-203ENST00000424459 CENPBP07199 599 aaPredicted RBP11.09□□□□□ -0.63
GPBP1-203ENST00000424459 TRIM26Q12899 539 aaPredicted RBP11.08□□□□□ -0.64
GPBP1-203ENST00000424459 CFDP1Q9UEE9 299 aaPredicted RBP11.07□□□□□ -0.64
GPBP1-203ENST00000424459 CHIC2Q9UKJ5 165 aa11.07□□□□□ -0.64
GPBP1-203ENST00000424459 CARMIL2Q6F5E8 1435 aa11.02□□□□□ -0.64
GPBP1-203ENST00000424459 ERICH6Q7L0X2 663 aa11.02□□□□□ -0.65
GPBP1-203ENST00000424459 CLSPNQ9HAW4 1339 aa11.02□□□□□ -0.65
GPBP1-203ENST00000424459 KIF27Q86VH2 1401 aa11□□□□□ -0.65
GPBP1-203ENST00000424459 DAXXQ9UER7 740 aaPredicted RBP10.99□□□□□ -0.65
GPBP1-203ENST00000424459 GGT6Q6P531 493 aa10.98□□□□□ -0.65
GPBP1-203ENST00000424459 RSF1Q96T23 1441 aaPredicted RBP10.97□□□□□ -0.65
GPBP1-203ENST00000424459 WRNQ14191 1432 aaPredicted RBP eCLIP10.97□□□□□ -0.65
GPBP1-203ENST00000424459 NPHP1O15259 732 aa10.97□□□□□ -0.65
GPBP1-203ENST00000424459 EFCAB2Q5VUJ9 269 aa10.96□□□□□ -0.66
GPBP1-203ENST00000424459 DCAF8L1A6NGE4 600 aa10.94□□□□□ -0.66
GPBP1-203ENST00000424459 POGKQ9P215 609 aa10.94□□□□□ -0.66
GPBP1-203ENST00000424459 ARXQ96QS3 562 aa10.94□□□□□ -0.66
GPBP1-203ENST00000424459 BCL11AQ9H165 835 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms