RNA–Protein interactions for RNA: ENST00000330854.15

SUGP2-201, Transcript of SURP and G-patch domain containing 2, humanhuman

TSL 1 (best)

Gene SUGP2, Length 3,629 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUGP2-201ENST00000330854 NISCHQ9Y2I1 1504 aa21.46■■□□□ 1.03
SUGP2-201ENST00000330854 CCDC180Q9P1Z9 1646 aa19.9■□□□□ 0.78
SUGP2-201ENST00000330854 ABCC9O60706 1549 aa19.3■□□□□ 0.68
SUGP2-201ENST00000330854 RB1CC1Q8TDY2 1594 aa18.83■□□□□ 0.6
SUGP2-201ENST00000330854 NACADO15069 1562 aa18.72■□□□□ 0.59
SUGP2-201ENST00000330854 MYO15BQ96JP2 1530 aa18.67■□□□□ 0.58
SUGP2-201ENST00000330854 SHROOM4Q9ULL8 1493 aa18.55■□□□□ 0.56
SUGP2-201ENST00000330854 UNC13AQ9UPW8 1703 aa18.33■□□□□ 0.53
SUGP2-201ENST00000330854 DNAJC5BQ9UF47 199 aa18.27■□□□□ 0.51
SUGP2-201ENST00000330854 DCAF8L2P0C7V8 631 aa18.22■□□□□ 0.51
SUGP2-201ENST00000330854 BICRAQ9NZM4 1560 aa18.2■□□□□ 0.5
SUGP2-201ENST00000330854 DCAF1Q9Y4B6 1507 aa18.19■□□□□ 0.5
SUGP2-201ENST00000330854 ZCCHC6Q5VYS8 1495 aaKnown RBP17.8■□□□□ 0.44
SUGP2-201ENST00000330854 CC2D2AQ9P2K1 1620 aa17.78■□□□□ 0.44
SUGP2-201ENST00000330854 EIF4G1Q04637 1599 aaKnown RBP17.71■□□□□ 0.43
SUGP2-201ENST00000330854 CECR2Q9BXF3 1484 aa17.66■□□□□ 0.42
SUGP2-201ENST00000330854 PABPN1Q86U42 306 aaKnown RBP eCLIP17.57■□□□□ 0.4
SUGP2-201ENST00000330854 CUX2O14529 1486 aa17.45■□□□□ 0.38
SUGP2-201ENST00000330854 DNAJC5Q9H3Z4 198 aa17.4■□□□□ 0.38
SUGP2-201ENST00000330854 SCRIBQ14160 1630 aa17.36■□□□□ 0.37
SUGP2-201ENST00000330854 NCAPD3P42695 1498 aa17.15■□□□□ 0.34
SUGP2-201ENST00000330854 HMGXB3Q12766 1538 aa17.15■□□□□ 0.34
SUGP2-201ENST00000330854 SUPT5HO00267 1087 aaKnown RBP17.04■□□□□ 0.32
SUGP2-201ENST00000330854 PEG3Q9GZU2 1588 aa17.03■□□□□ 0.32
SUGP2-201ENST00000330854 SMARCA2P51531 1590 aa17.02■□□□□ 0.31
SUGP2-201ENST00000330854 THOC2Q8NI27 1593 aaKnown RBP16.93■□□□□ 0.3
SUGP2-201ENST00000330854 LAMC3Q9Y6N6 1575 aa16.91■□□□□ 0.3
SUGP2-201ENST00000330854 ATAD2BQ9ULI0 1458 aa16.87■□□□□ 0.29
SUGP2-201ENST00000330854 SMARCA4P51532 1647 aa16.86■□□□□ 0.29
SUGP2-201ENST00000330854 ERCC6Q03468 1493 aa16.79■□□□□ 0.28
SUGP2-201ENST00000330854 BAZ1AQ9NRL2 1556 aaPredicted RBP16.76■□□□□ 0.27
SUGP2-201ENST00000330854 WDR62O43379 1518 aa16.65■□□□□ 0.26
SUGP2-201ENST00000330854 BAZ1BQ9UIG0 1483 aaKnown RBP16.61■□□□□ 0.25
SUGP2-201ENST00000330854 PDS5BQ9NTI5 1447 aa16.59■□□□□ 0.25
SUGP2-201ENST00000330854 KIF21AQ7Z4S6 1674 aa16.59■□□□□ 0.25
SUGP2-201ENST00000330854 MRC2Q9UBG0 1479 aa16.53■□□□□ 0.24
SUGP2-201ENST00000330854 NESP48681 1621 aa16.47■□□□□ 0.23
SUGP2-201ENST00000330854 PRDM2Q13029 1718 aa16.44■□□□□ 0.22
SUGP2-201ENST00000330854 CADPSQ9ULU8 1353 aa16.39■□□□□ 0.21
SUGP2-201ENST00000330854 MROH2BQ7Z745 1585 aa16.3■□□□□ 0.2
SUGP2-201ENST00000330854 CEP164Q9UPV0 1460 aa16.28■□□□□ 0.2
SUGP2-201ENST00000330854 CFTRP13569 1480 aa16.26■□□□□ 0.19
SUGP2-201ENST00000330854 WDR97A6NE52 1622 aa16.25■□□□□ 0.19
SUGP2-201ENST00000330854 TOP2AP11388 1531 aaKnown RBP16.16■□□□□ 0.18
SUGP2-201ENST00000330854 FANCD2Q9BXW9 1451 aa16.16■□□□□ 0.18
SUGP2-201ENST00000330854 ABCC8Q09428 1581 aa16.14■□□□□ 0.17
SUGP2-201ENST00000330854 RIMBP3CA6NJZ7 1639 aa16.13■□□□□ 0.17
SUGP2-201ENST00000330854 RIMBP3BA6NNM3 1639 aa16.13■□□□□ 0.17
SUGP2-201ENST00000330854 RIMBP3Q9UFD9 1639 aa16.13■□□□□ 0.17
SUGP2-201ENST00000330854 IFT140Q96RY7 1462 aa16.12■□□□□ 0.17
SUGP2-201ENST00000330854 EHMT2Q96KQ7 1210 aa16.12■□□□□ 0.17
SUGP2-201ENST00000330854 URB2Q14146 1524 aaKnown RBP16.08■□□□□ 0.16
SUGP2-201ENST00000330854 WIZO95785 1651 aa16.07■□□□□ 0.16
SUGP2-201ENST00000330854 OSCARQ8IYS5 282 aa16.03■□□□□ 0.16
SUGP2-201ENST00000330854 RSF1Q96T23 1441 aaPredicted RBP16.03■□□□□ 0.16
SUGP2-201ENST00000330854 ARHGEF11O15085 1522 aa15.98■□□□□ 0.15
SUGP2-201ENST00000330854 DNMBPQ6XZF7 1577 aa15.96■□□□□ 0.15
SUGP2-201ENST00000330854 TARBP1Q13395 1621 aaKnown RBP15.93■□□□□ 0.14
SUGP2-201ENST00000330854 FAM9AQ8IZU1 332 aaPredicted RBP15.93■□□□□ 0.14
SUGP2-201ENST00000330854 EIF4G3O43432 1585 aaKnown RBP15.92■□□□□ 0.14
SUGP2-201ENST00000330854 TOPBP1Q92547 1522 aa15.88■□□□□ 0.13
SUGP2-201ENST00000330854 CLASP1Q7Z460 1538 aa15.87■□□□□ 0.13
SUGP2-201ENST00000330854 PPARGC1BQ86YN6 1023 aaKnown RBP15.86■□□□□ 0.13
SUGP2-201ENST00000330854 CHD1O14646 1710 aa15.86■□□□□ 0.13
SUGP2-201ENST00000330854 TRIM41Q8WV44 630 aa15.85■□□□□ 0.13
SUGP2-201ENST00000330854 HRCP23327 699 aa15.82■□□□□ 0.12
SUGP2-201ENST00000330854 ARAP1Q96P48 1450 aa15.78■□□□□ 0.12
SUGP2-201ENST00000330854 PCGF6Q9BYE7 350 aa15.76■□□□□ 0.11
SUGP2-201ENST00000330854 SYNJ1O43426 1573 aa15.75■□□□□ 0.11
SUGP2-201ENST00000330854 MAGI1Q96QZ7 1491 aaPredicted RBP15.74■□□□□ 0.11
SUGP2-201ENST00000330854 ZNF608Q9ULD9 1512 aaPredicted RBP15.73■□□□□ 0.11
SUGP2-201ENST00000330854 CCDC88BA6NC98 1476 aa15.69■□□□□ 0.1
SUGP2-201ENST00000330854 CHIC1Q5VXU3 224 aa15.68■□□□□ 0.1
SUGP2-201ENST00000330854 POLA1P09884 1462 aaPredicted RBP15.63■□□□□ 0.09
SUGP2-201ENST00000330854 PBRM1Q86U86 1689 aa15.6■□□□□ 0.09
SUGP2-201ENST00000330854 SHROOM2Q13796 1616 aa15.59■□□□□ 0.09
SUGP2-201ENST00000330854 SYNJ2O15056 1496 aa15.58■□□□□ 0.09
SUGP2-201ENST00000330854 GRIN2BQ13224 1484 aa15.57■□□□□ 0.08
SUGP2-201ENST00000330854 ABCA5Q8WWZ7 1642 aa15.57■□□□□ 0.08
SUGP2-201ENST00000330854 RANGAP1P46060 587 aaPredicted RBP15.54■□□□□ 0.08
SUGP2-201ENST00000330854 SNAPC4Q5SXM2 1469 aa15.5■□□□□ 0.07
SUGP2-201ENST00000330854 LOC105371045A0A1W2PR82 267 aa15.5■□□□□ 0.07
SUGP2-201ENST00000330854 ABCA10Q8WWZ4 1543 aa15.48■□□□□ 0.07
SUGP2-201ENST00000330854 AQRO60306 1485 aaKnown RBP eCLIP15.45■□□□□ 0.064e-7■■■■□ 26.1
SUGP2-201ENST00000330854 SOGA1O94964 1423 aa15.45■□□□□ 0.06
SUGP2-201ENST00000330854 FGD5Q6ZNL6 1462 aa15.43■□□□□ 0.06
SUGP2-201ENST00000330854 NUP160Q12769 1436 aa15.43■□□□□ 0.06
SUGP2-201ENST00000330854 ADAMTS12P58397 1594 aa15.42■□□□□ 0.06
SUGP2-201ENST00000330854 CUX1P39880 1505 aa15.42■□□□□ 0.06
SUGP2-201ENST00000330854 GAPVD1Q14C86 1478 aa15.4■□□□□ 0.06
SUGP2-201ENST00000330854 BIVM-ERCC5R4GMW8 1640 aa15.39■□□□□ 0.05
SUGP2-201ENST00000330854 KIF13AQ9H1H9 1805 aa15.37■□□□□ 0.05
SUGP2-201ENST00000330854 MAPKBP1O60336 1514 aa15.36■□□□□ 0.05
SUGP2-201ENST00000330854 ERICH3Q5RHP9 1530 aa15.36■□□□□ 0.05
SUGP2-201ENST00000330854 TTBK1Q5TCY1 1321 aaPredicted RBP15.36■□□□□ 0.05
SUGP2-201ENST00000330854 CEP170Q5SW79 1584 aa15.33■□□□□ 0.04
SUGP2-201ENST00000330854 RAD54L2Q9Y4B4 1467 aa15.33■□□□□ 0.04
SUGP2-201ENST00000330854 GRIN2AQ12879 1464 aa15.33■□□□□ 0.04
SUGP2-201ENST00000330854 CYB5RLQ6IPT4 315 aa15.32■□□□□ 0.04
SUGP2-201ENST00000330854 UBTFP17480 764 aaKnown RBP15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms