RNA–Protein interactions for RNA: ENST00000209875.8

CBX5-201, Transcript of chromobox 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX5, Length 11,528 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX5-201ENST00000209875 NISCHQ9Y2I1 1504 aa9.95□□□□□ -0.82
CBX5-201ENST00000209875 DCAF8L2P0C7V8 631 aa9.46□□□□□ -0.89
CBX5-201ENST00000209875 PELP1Q8IZL8 1130 aaKnown RBP9.38□□□□□ -0.91
CBX5-201ENST00000209875 MYT1Q01538 1121 aa9.24□□□□□ -0.93
CBX5-201ENST00000209875 SUPT5HO00267 1087 aaKnown RBP9.1□□□□□ -0.95
CBX5-201ENST00000209875 FAM9AQ8IZU1 332 aaPredicted RBP9.09□□□□□ -0.95
CBX5-201ENST00000209875 APLP2Q06481 763 aa9□□□□□ -0.97
CBX5-201ENST00000209875 ZEB1P37275 1124 aaPredicted RBP8.97□□□□□ -0.97
CBX5-201ENST00000209875 CCER1Q8TC90 406 aaPredicted RBP8.89□□□□□ -0.99
CBX5-201ENST00000209875 SHROOM4Q9ULL8 1493 aa8.83□□□□□ -1
CBX5-201ENST00000209875 CENPBP07199 599 aaPredicted RBP8.81□□□□□ -1
CBX5-201ENST00000209875 ERICH6Q7L0X2 663 aa8.72□□□□□ -1.01
CBX5-201ENST00000209875 TRIM41Q8WV44 630 aa8.71□□□□□ -1.02
CBX5-201ENST00000209875 YTHDC1Q96MU7 727 aaKnown RBP8.64□□□□□ -1.03
CBX5-201ENST00000209875 TRIM26Q12899 539 aaPredicted RBP8.51□□□□□ -1.05
CBX5-201ENST00000209875 NEFLP07196 543 aa8.51□□□□□ -1.05
CBX5-201ENST00000209875 UBTFP17480 764 aaKnown RBP8.49□□□□□ -1.05
CBX5-201ENST00000209875 TTBK1Q5TCY1 1321 aaPredicted RBP8.48□□□□□ -1.05
CBX5-201ENST00000209875 PCGF6Q9BYE7 350 aa8.47□□□□□ -1.05
CBX5-201ENST00000209875 CHIC1Q5VXU3 224 aa8.38□□□□□ -1.07
CBX5-201ENST00000209875 ACIN1Q9UKV3 1341 aaKnown RBP8.35□□□□□ -1.07
CBX5-201ENST00000209875 CCDC180Q9P1Z9 1646 aa8.35□□□□□ -1.07
CBX5-201ENST00000209875 HRCP23327 699 aa8.32□□□□□ -1.08
CBX5-201ENST00000209875 DAXXQ9UER7 740 aaPredicted RBP8.31□□□□□ -1.08
CBX5-201ENST00000209875 ZCCHC6Q5VYS8 1495 aaKnown RBP8.31□□□□□ -1.08
CBX5-201ENST00000209875 EHMT2Q96KQ7 1210 aa8.27□□□□□ -1.09
CBX5-201ENST00000209875 CLSPNQ9HAW4 1339 aa8.26□□□□□ -1.09
CBX5-201ENST00000209875 ATP1B4Q9UN42 357 aaPredicted RBP8.24□□□□□ -1.09
CBX5-201ENST00000209875 RTL5Q5HYW3 569 aaPredicted RBP8.23□□□□□ -1.09
CBX5-201ENST00000209875 DCAF1Q9Y4B6 1507 aa8.22□□□□□ -1.09
CBX5-201ENST00000209875 EEA1Q15075 1411 aa8.21□□□□□ -1.1
CBX5-201ENST00000209875 MYT1LQ9UL68 1186 aa8.16□□□□□ -1.1
CBX5-201ENST00000209875 CDK11AQ9UQ88 783 aaPredicted RBP8.15□□□□□ -1.11
CBX5-201ENST00000209875 ABCC9O60706 1549 aa8.14□□□□□ -1.11
CBX5-201ENST00000209875 CSRNP3Q8WYN3 585 aa8.13□□□□□ -1.11
CBX5-201ENST00000209875 RANGAP1P46060 587 aaPredicted RBP8.11□□□□□ -1.11
CBX5-201ENST00000209875 NACADO15069 1562 aa8.1□□□□□ -1.11
CBX5-201ENST00000209875 ZNF316A6NFI3 1004 aaPredicted RBP8.1□□□□□ -1.11
CBX5-201ENST00000209875 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.1□□□□□ -1.11
CBX5-201ENST00000209875 HNRNPUL2Q1KMD3 747 aaKnown RBP8.1□□□□□ -1.11
CBX5-201ENST00000209875 RB1CC1Q8TDY2 1594 aa8.08□□□□□ -1.12
CBX5-201ENST00000209875 MYO15BQ96JP2 1530 aa8.07□□□□□ -1.12
CBX5-201ENST00000209875 GLIPR1L2Q4G1C9 344 aa8.06□□□□□ -1.12
CBX5-201ENST00000209875 DIEXFQ68CQ4 756 aaKnown RBP8.02□□□□□ -1.12
CBX5-201ENST00000209875 SCRIBQ14160 1630 aa8□□□□□ -1.13
CBX5-201ENST00000209875 ANP32CO43423 234 aa8□□□□□ -1.13
CBX5-201ENST00000209875 LOC105371045A0A1W2PR82 267 aa7.99□□□□□ -1.13
CBX5-201ENST00000209875 FAM50AQ14320 339 aaKnown RBP7.96□□□□□ -1.14
CBX5-201ENST00000209875 RSF1Q96T23 1441 aaPredicted RBP7.95□□□□□ -1.14
CBX5-201ENST00000209875 ITGAEP38570 1179 aa7.94□□□□□ -1.14
CBX5-201ENST00000209875 TRIM52Q96A61 297 aa7.94□□□□□ -1.14
CBX5-201ENST00000209875 NEFMP07197 916 aa7.94□□□□□ -1.14
CBX5-201ENST00000209875 BAZ1AQ9NRL2 1556 aaPredicted RBP7.93□□□□□ -1.14
CBX5-201ENST00000209875 PABPN1Q86U42 306 aaKnown RBP eCLIP7.92□□□□□ -1.14
CBX5-201ENST00000209875 TIMELESSQ9UNS1 1208 aa7.92□□□□□ -1.14
CBX5-201ENST00000209875 GOLGA3Q08378 1498 aa7.92□□□□□ -1.14
CBX5-201ENST00000209875 SLC24A1O60721 1099 aa7.91□□□□□ -1.14
CBX5-201ENST00000209875 ANP32AP39687 249 aaKnown RBP7.89□□□□□ -1.15
CBX5-201ENST00000209875 EIF5BO60841 1220 aaKnown RBP7.89□□□□□ -1.15
CBX5-201ENST00000209875 ANP32BQ92688 251 aaKnown RBP7.88□□□□□ -1.15
CBX5-201ENST00000209875 ZBTB47Q9UFB7 747 aaPredicted RBP7.88□□□□□ -1.15
CBX5-201ENST00000209875 CEP164Q9UPV0 1460 aa7.88□□□□□ -1.15
CBX5-201ENST00000209875 TNIKQ9UKE5 1360 aa7.88□□□□□ -1.15
CBX5-201ENST00000209875 TONSLQ96HA7 1378 aa7.88□□□□□ -1.15
CBX5-201ENST00000209875 KIF27Q86VH2 1401 aa7.86□□□□□ -1.15
CBX5-201ENST00000209875 CLIP1P30622 1438 aa7.86□□□□□ -1.15
CBX5-201ENST00000209875 WRNQ14191 1432 aaPredicted RBP eCLIP7.85□□□□□ -1.15
CBX5-201ENST00000209875 GTF3C3Q9Y5Q9 886 aa7.84□□□□□ -1.15
CBX5-201ENST00000209875 FHAD1B1AJZ9 1412 aa7.83□□□□□ -1.16
CBX5-201ENST00000209875 NPM1P06748 294 aaKnown RBP eCLIP7.83□□□□□ -1.16
CBX5-201ENST00000209875 BAZ1BQ9UIG0 1483 aaKnown RBP7.83□□□□□ -1.16
CBX5-201ENST00000209875 POLR3GLQ9BT43 218 aa7.82□□□□□ -1.16
CBX5-201ENST00000209875 PPARGC1BQ86YN6 1023 aaKnown RBP7.82□□□□□ -1.16
CBX5-201ENST00000209875 TSPY4P0CV99 314 aa7.82□□□□□ -1.16
CBX5-201ENST00000209875 TSPY10P0CW01 314 aa7.82□□□□□ -1.16
CBX5-201ENST00000209875 GOLGA6L2Q8N9W4 650 aaPredicted RBP7.81□□□□□ -1.16
CBX5-201ENST00000209875 MTUS2Q5JR59 1369 aa7.81□□□□□ -1.16
CBX5-201ENST00000209875 CDCA8Q53HL2 280 aa7.81□□□□□ -1.16
CBX5-201ENST00000209875 SMARCA2P51531 1590 aa7.77□□□□□ -1.17
CBX5-201ENST00000209875 ANP32EQ9BTT0 268 aa7.77□□□□□ -1.17
CBX5-201ENST00000209875 NEUROD1Q13562 356 aa7.76□□□□□ -1.17
CBX5-201ENST00000209875 ESF1Q9H501 851 aaKnown RBP7.76□□□□□ -1.17
CBX5-201ENST00000209875 CEP162Q5TB80 1403 aa7.75□□□□□ -1.17
CBX5-201ENST00000209875 UPF2Q9HAU5 1272 aaKnown RBP7.75□□□□□ -1.17
CBX5-201ENST00000209875 KAT6BQ8WYB5 2073 aa7.75□□□□□ -1.17
CBX5-201ENST00000209875 CANXP27824 592 aaKnown RBP7.74□□□□□ -1.17
CBX5-201ENST00000209875 SLC4A1APQ9BWU0 796 aaKnown RBP7.73□□□□□ -1.17
CBX5-201ENST00000209875 FBLN2P98095 1184 aa7.73□□□□□ -1.17
CBX5-201ENST00000209875 ARID4BQ4LE39 1312 aaPredicted RBP7.73□□□□□ -1.17
CBX5-201ENST00000209875 PLEKHD1A6NEE1 506 aa7.72□□□□□ -1.17
CBX5-201ENST00000209875 CHMP4BQ9H444 224 aaKnown RBP7.72□□□□□ -1.17
CBX5-201ENST00000209875 EIF4G2P78344 907 aaKnown RBP eCLIP7.71□□□□□ -1.18
CBX5-201ENST00000209875 CHMP7Q8WUX9 453 aaPredicted RBP7.7□□□□□ -1.18
CBX5-201ENST00000209875 ERICH6BQ5W0A0 696 aa7.69□□□□□ -1.18
CBX5-201ENST00000209875 PDS5BQ9NTI5 1447 aa7.68□□□□□ -1.18
CBX5-201ENST00000209875 ZNF326Q5BKZ1 582 aaKnown RBP7.67□□□□□ -1.18
CBX5-201ENST00000209875 ABCC8Q09428 1581 aa7.67□□□□□ -1.18
CBX5-201ENST00000209875 TNNT2P45379 298 aaPredicted RBP7.67□□□□□ -1.18
CBX5-201ENST00000209875 FMN1Q68DA7 1419 aa7.67□□□□□ -1.18
CBX5-201ENST00000209875 CFAP44Q96MT7 982 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms