RNA–Protein interactions for RNA: ENST00000449504.5

HDLBP-222, Transcript of high density lipoprotein binding protein, humanhuman

TSL 5

Gene HDLBP, Length 566 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-222ENST00000449504 NISCHQ9Y2I1 1504 aa18.47■□□□□ 0.55
HDLBP-222ENST00000449504 AEBP2Q6ZN18 517 aaPredicted RBP17.42■□□□□ 0.38
HDLBP-222ENST00000449504 ABCC9O60706 1549 aa17.37■□□□□ 0.37
HDLBP-222ENST00000449504 DNAJC5BQ9UF47 199 aa16.77■□□□□ 0.28
HDLBP-222ENST00000449504 CCDC180Q9P1Z9 1646 aa16.69■□□□□ 0.26
HDLBP-222ENST00000449504 RB1CC1Q8TDY2 1594 aa16.21■□□□□ 0.18
HDLBP-222ENST00000449504 CHIC1Q5VXU3 224 aa16.18■□□□□ 0.18
HDLBP-222ENST00000449504 PABPN1Q86U42 306 aaKnown RBP eCLIP16.16■□□□□ 0.18
HDLBP-222ENST00000449504 DCAF8L2P0C7V8 631 aa16.05■□□□□ 0.16
HDLBP-222ENST00000449504 NACADO15069 1562 aa15.96■□□□□ 0.14
HDLBP-222ENST00000449504 UNC13AQ9UPW8 1703 aa15.77■□□□□ 0.11
HDLBP-222ENST00000449504 BICRAQ9NZM4 1560 aa15.74■□□□□ 0.11
HDLBP-222ENST00000449504 DNAJC5Q9H3Z4 198 aa15.73■□□□□ 0.11
HDLBP-222ENST00000449504 CECR2Q9BXF3 1484 aa15.66■□□□□ 0.1
HDLBP-222ENST00000449504 CC2D2AQ9P2K1 1620 aa15.58■□□□□ 0.09
HDLBP-222ENST00000449504 MYO15BQ96JP2 1530 aa15.51■□□□□ 0.07
HDLBP-222ENST00000449504 EIF4G1Q04637 1599 aaKnown RBP15.41■□□□□ 0.06
HDLBP-222ENST00000449504 SHROOM4Q9ULL8 1493 aa15.4■□□□□ 0.06
HDLBP-222ENST00000449504 SCRIBQ14160 1630 aa15.3■□□□□ 0.04
HDLBP-222ENST00000449504 ZCCHC6Q5VYS8 1495 aaKnown RBP15.17■□□□□ 0.02
HDLBP-222ENST00000449504 DCAF1Q9Y4B6 1507 aa15.15■□□□□ 0.02
HDLBP-222ENST00000449504 CUX2O14529 1486 aa15.08■□□□□ 0
HDLBP-222ENST00000449504 ERCC6Q03468 1493 aa15.02■□□□□ -0
HDLBP-222ENST00000449504 TRIM41Q8WV44 630 aa14.95□□□□□ -0.02
HDLBP-222ENST00000449504 SENP3Q9H4L4 574 aaPredicted RBP14.84□□□□□ -0.03
HDLBP-222ENST00000449504 NCAPD3P42695 1498 aa14.77□□□□□ -0.04
HDLBP-222ENST00000449504 NESP48681 1621 aa14.75□□□□□ -0.05
HDLBP-222ENST00000449504 ATAD2BQ9ULI0 1458 aa14.67□□□□□ -0.06
HDLBP-222ENST00000449504 PHF23Q9BUL5 403 aaPredicted RBP14.64□□□□□ -0.07
HDLBP-222ENST00000449504 THOC2Q8NI27 1593 aaKnown RBP14.6□□□□□ -0.07
HDLBP-222ENST00000449504 SMARCA2P51531 1590 aa14.58□□□□□ -0.08
HDLBP-222ENST00000449504 HMGXB3Q12766 1538 aa14.56□□□□□ -0.08
HDLBP-222ENST00000449504 BAZ1BQ9UIG0 1483 aaKnown RBP14.51□□□□□ -0.09
HDLBP-222ENST00000449504 SMARCA4P51532 1647 aa14.49□□□□□ -0.09
HDLBP-222ENST00000449504 PDS5BQ9NTI5 1447 aa14.49□□□□□ -0.09
HDLBP-222ENST00000449504 LAMC3Q9Y6N6 1575 aa14.48□□□□□ -0.09
HDLBP-222ENST00000449504 KIF21AQ7Z4S6 1674 aa14.46□□□□□ -0.09
HDLBP-222ENST00000449504 OSCARQ8IYS5 282 aa14.42□□□□□ -0.1
HDLBP-222ENST00000449504 MRC2Q9UBG0 1479 aa14.38□□□□□ -0.11
HDLBP-222ENST00000449504 BAZ1AQ9NRL2 1556 aaPredicted RBP14.36□□□□□ -0.11
HDLBP-222ENST00000449504 CADPSQ9ULU8 1353 aa14.34□□□□□ -0.11
HDLBP-222ENST00000449504 WDR62O43379 1518 aa14.31□□□□□ -0.12
HDLBP-222ENST00000449504 PEG3Q9GZU2 1588 aa14.3□□□□□ -0.12
HDLBP-222ENST00000449504 MROH2BQ7Z745 1585 aa14.26□□□□□ -0.13
HDLBP-222ENST00000449504 CEP164Q9UPV0 1460 aa14.22□□□□□ -0.13
HDLBP-222ENST00000449504 TRHP20396 242 aaPredicted RBP14.21□□□□□ -0.13
HDLBP-222ENST00000449504 RIMBP3CA6NJZ7 1639 aa14.19□□□□□ -0.14
HDLBP-222ENST00000449504 RIMBP3BA6NNM3 1639 aa14.19□□□□□ -0.14
HDLBP-222ENST00000449504 RIMBP3Q9UFD9 1639 aa14.19□□□□□ -0.14
HDLBP-222ENST00000449504 CYB5RLQ6IPT4 315 aa14.17□□□□□ -0.14
HDLBP-222ENST00000449504 FANCD2Q9BXW9 1451 aa14.17□□□□□ -0.14
HDLBP-222ENST00000449504 ARHGEF11O15085 1522 aa14.11□□□□□ -0.15
HDLBP-222ENST00000449504 URB2Q14146 1524 aaKnown RBP14.07□□□□□ -0.16
HDLBP-222ENST00000449504 WIZO95785 1651 aa14.04□□□□□ -0.16
HDLBP-222ENST00000449504 CFTRP13569 1480 aa14.03□□□□□ -0.16
HDLBP-222ENST00000449504 ZNF608Q9ULD9 1512 aaPredicted RBP14□□□□□ -0.17
HDLBP-222ENST00000449504 FBLN2P98095 1184 aa13.96□□□□□ -0.17
HDLBP-222ENST00000449504 ARAP1Q96P48 1450 aa13.94□□□□□ -0.18
HDLBP-222ENST00000449504 IFT140Q96RY7 1462 aa13.94□□□□□ -0.18
HDLBP-222ENST00000449504 FOXD1Q16676 465 aa13.94□□□□□ -0.18
HDLBP-222ENST00000449504 AQRO60306 1485 aaKnown RBP eCLIP13.85□□□□□ -0.192e-16■■■■□ 25
HDLBP-222ENST00000449504 EIF4G3O43432 1585 aaKnown RBP13.84□□□□□ -0.19
HDLBP-222ENST00000449504 RSF1Q96T23 1441 aaPredicted RBP13.83□□□□□ -0.2
HDLBP-222ENST00000449504 TOPBP1Q92547 1522 aa13.83□□□□□ -0.2
HDLBP-222ENST00000449504 CHD1O14646 1710 aa13.82□□□□□ -0.2
HDLBP-222ENST00000449504 TOP2AP11388 1531 aaKnown RBP13.8□□□□□ -0.2
HDLBP-222ENST00000449504 ABCC8Q09428 1581 aa13.75□□□□□ -0.21
HDLBP-222ENST00000449504 PRDM2Q13029 1718 aa13.73□□□□□ -0.21
HDLBP-222ENST00000449504 CHMP7Q8WUX9 453 aaPredicted RBP13.72□□□□□ -0.21
HDLBP-222ENST00000449504 CCDC88BA6NC98 1476 aa13.71□□□□□ -0.21
HDLBP-222ENST00000449504 DNMBPQ6XZF7 1577 aa13.71□□□□□ -0.22
HDLBP-222ENST00000449504 TDRD9Q8NDG6 1382 aaKnown RBP13.71□□□□□ -0.22
HDLBP-222ENST00000449504 TARBP1Q13395 1621 aaKnown RBP13.7□□□□□ -0.22
HDLBP-222ENST00000449504 RAD54L2Q9Y4B4 1467 aa13.67□□□□□ -0.22
HDLBP-222ENST00000449504 POLA1P09884 1462 aaPredicted RBP13.66□□□□□ -0.22
HDLBP-222ENST00000449504 SNAPC4Q5SXM2 1469 aa13.66□□□□□ -0.22
HDLBP-222ENST00000449504 CLASP1Q7Z460 1538 aa13.65□□□□□ -0.22
HDLBP-222ENST00000449504 SOGA1O94964 1423 aa13.64□□□□□ -0.23
HDLBP-222ENST00000449504 SYNJ1O43426 1573 aa13.62□□□□□ -0.23
HDLBP-222ENST00000449504 GAPVD1Q14C86 1478 aa13.61□□□□□ -0.23
HDLBP-222ENST00000449504 ILDR1Q86SU0 546 aaPredicted RBP13.58□□□□□ -0.24
HDLBP-222ENST00000449504 MAGI1Q96QZ7 1491 aaPredicted RBP13.55□□□□□ -0.24
HDLBP-222ENST00000449504 POTEDQ86YR6 584 aa13.54□□□□□ -0.24
HDLBP-222ENST00000449504 SYNJ2O15056 1496 aa13.54□□□□□ -0.24
HDLBP-222ENST00000449504 GRIN2BQ13224 1484 aa13.54□□□□□ -0.24
HDLBP-222ENST00000449504 FGD5Q6ZNL6 1462 aa13.52□□□□□ -0.25
HDLBP-222ENST00000449504 WDR97A6NE52 1622 aa13.46□□□□□ -0.25
HDLBP-222ENST00000449504 ERCC6L2Q5T890 1561 aa13.46□□□□□ -0.25
HDLBP-222ENST00000449504 KDM4FA0A1W2PPD8 638 aa13.43□□□□□ -0.26
HDLBP-222ENST00000449504 FAM69CQ0P6D2 419 aa13.41□□□□□ -0.26
HDLBP-222ENST00000449504 CUX1P39880 1505 aa13.4□□□□□ -0.26
HDLBP-222ENST00000449504 PBRM1Q86U86 1689 aa13.37□□□□□ -0.27
HDLBP-222ENST00000449504 CEP170Q5SW79 1584 aa13.37□□□□□ -0.27
HDLBP-222ENST00000449504 KIF13AQ9H1H9 1805 aa13.36□□□□□ -0.27
HDLBP-222ENST00000449504 GRIN2AQ12879 1464 aa13.36□□□□□ -0.27
HDLBP-222ENST00000449504 NPM1P06748 294 aaKnown RBP eCLIP13.35□□□□□ -0.27
HDLBP-222ENST00000449504 NUP160Q12769 1436 aa13.3□□□□□ -0.28
HDLBP-222ENST00000449504 ABCC10Q5T3U5 1492 aa13.29□□□□□ -0.28
HDLBP-222ENST00000449504 ABCA10Q8WWZ4 1543 aa13.29□□□□□ -0.28
HDLBP-222ENST00000449504 PRG4Q92954 1404 aaPredicted RBP13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms