RNA–Protein interactions for RNA: ENST00000325642.7

PPM1A-201, Transcript of protein phosphatase, Mg2+/Mn2+ dependent 1A, humanhuman

TSL 2 BASIC

Gene PPM1A, Length 1,713 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPM1A-201ENST00000325642 NISCHQ9Y2I1 1504 aa21.63■■□□□ 1.05
PPM1A-201ENST00000325642 ABCC9O60706 1549 aa20.81■□□□□ 0.92
PPM1A-201ENST00000325642 DNAJC5BQ9UF47 199 aa20.41■□□□□ 0.86
PPM1A-201ENST00000325642 CCDC180Q9P1Z9 1646 aa19.82■□□□□ 0.76
PPM1A-201ENST00000325642 DNAJC5Q9H3Z4 198 aa19.5■□□□□ 0.71
PPM1A-201ENST00000325642 RB1CC1Q8TDY2 1594 aa19.37■□□□□ 0.69
PPM1A-201ENST00000325642 PABPN1Q86U42 306 aaKnown RBP eCLIP19.24■□□□□ 0.67
PPM1A-201ENST00000325642 NACADO15069 1562 aa19■□□□□ 0.63
PPM1A-201ENST00000325642 UNC13AQ9UPW8 1703 aa18.88■□□□□ 0.61
PPM1A-201ENST00000325642 CECR2Q9BXF3 1484 aa18.87■□□□□ 0.61
PPM1A-201ENST00000325642 BICRAQ9NZM4 1560 aa18.82■□□□□ 0.6
PPM1A-201ENST00000325642 CC2D2AQ9P2K1 1620 aa18.74■□□□□ 0.59
PPM1A-201ENST00000325642 DCAF8L2P0C7V8 631 aa18.73■□□□□ 0.59
PPM1A-201ENST00000325642 SHROOM4Q9ULL8 1493 aa18.5■□□□□ 0.55
PPM1A-201ENST00000325642 EIF4G1Q04637 1599 aaKnown RBP18.46■□□□□ 0.55
PPM1A-201ENST00000325642 MYO15BQ96JP2 1530 aa18.41■□□□□ 0.54
PPM1A-201ENST00000325642 CUX2O14529 1486 aa18.36■□□□□ 0.53
PPM1A-201ENST00000325642 TRIM41Q8WV44 630 aa18.23■□□□□ 0.51
PPM1A-201ENST00000325642 ERCC6Q03468 1493 aa18.06■□□□□ 0.48
PPM1A-201ENST00000325642 SCRIBQ14160 1630 aa18.01■□□□□ 0.47
PPM1A-201ENST00000325642 DCAF1Q9Y4B6 1507 aa17.8■□□□□ 0.44
PPM1A-201ENST00000325642 ZCCHC6Q5VYS8 1495 aaKnown RBP17.7■□□□□ 0.42
PPM1A-201ENST00000325642 THOC2Q8NI27 1593 aaKnown RBP17.59■□□□□ 0.41
PPM1A-201ENST00000325642 NESP48681 1621 aa17.58■□□□□ 0.41
PPM1A-201ENST00000325642 NCAPD3P42695 1498 aa17.56■□□□□ 0.4
PPM1A-201ENST00000325642 AEBP2Q6ZN18 517 aaPredicted RBP17.44■□□□□ 0.38
PPM1A-201ENST00000325642 SMARCA2P51531 1590 aa17.42■□□□□ 0.38
PPM1A-201ENST00000325642 OSCARQ8IYS5 282 aa17.38■□□□□ 0.37
PPM1A-201ENST00000325642 ATAD2BQ9ULI0 1458 aa17.36■□□□□ 0.37
PPM1A-201ENST00000325642 BAZ1AQ9NRL2 1556 aaPredicted RBP17.34■□□□□ 0.37
PPM1A-201ENST00000325642 HMGXB3Q12766 1538 aa17.32■□□□□ 0.36
PPM1A-201ENST00000325642 LAMC3Q9Y6N6 1575 aa17.31■□□□□ 0.36
PPM1A-201ENST00000325642 KIF21AQ7Z4S6 1674 aa17.31■□□□□ 0.36
PPM1A-201ENST00000325642 PDS5BQ9NTI5 1447 aa17.27■□□□□ 0.36
PPM1A-201ENST00000325642 RIMBP3CA6NJZ7 1639 aa17.21■□□□□ 0.35
PPM1A-201ENST00000325642 RIMBP3BA6NNM3 1639 aa17.21■□□□□ 0.35
PPM1A-201ENST00000325642 RIMBP3Q9UFD9 1639 aa17.21■□□□□ 0.35
PPM1A-201ENST00000325642 TRHP20396 242 aaPredicted RBP17.18■□□□□ 0.34
PPM1A-201ENST00000325642 MRC2Q9UBG0 1479 aa17.17■□□□□ 0.34
PPM1A-201ENST00000325642 WDR62O43379 1518 aa17.14■□□□□ 0.33
PPM1A-201ENST00000325642 BAZ1BQ9UIG0 1483 aaKnown RBP17.14■□□□□ 0.33
PPM1A-201ENST00000325642 SMARCA4P51532 1647 aa17.07■□□□□ 0.32
PPM1A-201ENST00000325642 ARHGEF11O15085 1522 aa17.07■□□□□ 0.32
PPM1A-201ENST00000325642 CYB5RLQ6IPT4 315 aa17.04■□□□□ 0.32
PPM1A-201ENST00000325642 CADPSQ9ULU8 1353 aa16.98■□□□□ 0.31
PPM1A-201ENST00000325642 PEG3Q9GZU2 1588 aa16.92■□□□□ 0.3
PPM1A-201ENST00000325642 CEP164Q9UPV0 1460 aa16.9■□□□□ 0.3
PPM1A-201ENST00000325642 ILDR1Q86SU0 546 aaPredicted RBP16.84■□□□□ 0.29
PPM1A-201ENST00000325642 ARAP1Q96P48 1450 aa16.84■□□□□ 0.29
PPM1A-201ENST00000325642 FANCD2Q9BXW9 1451 aa16.79■□□□□ 0.28
PPM1A-201ENST00000325642 URB2Q14146 1524 aaKnown RBP16.7■□□□□ 0.26
PPM1A-201ENST00000325642 RSF1Q96T23 1441 aaPredicted RBP16.67■□□□□ 0.26
PPM1A-201ENST00000325642 ZNF608Q9ULD9 1512 aaPredicted RBP16.66■□□□□ 0.26
PPM1A-201ENST00000325642 MROH2BQ7Z745 1585 aa16.65■□□□□ 0.26
PPM1A-201ENST00000325642 IFT140Q96RY7 1462 aa16.6■□□□□ 0.25
PPM1A-201ENST00000325642 CFTRP13569 1480 aa16.57■□□□□ 0.24
PPM1A-201ENST00000325642 CHD1O14646 1710 aa16.56■□□□□ 0.24
PPM1A-201ENST00000325642 FBLN2P98095 1184 aa16.52■□□□□ 0.24
PPM1A-201ENST00000325642 EIF4G3O43432 1585 aaKnown RBP16.5■□□□□ 0.23
PPM1A-201ENST00000325642 AQRO60306 1485 aaKnown RBP eCLIP16.39■□□□□ 0.22
PPM1A-201ENST00000325642 WIZO95785 1651 aa16.38■□□□□ 0.21
PPM1A-201ENST00000325642 CLASP1Q7Z460 1538 aa16.36■□□□□ 0.21
PPM1A-201ENST00000325642 TOPBP1Q92547 1522 aa16.35■□□□□ 0.21
PPM1A-201ENST00000325642 KDM4FA0A1W2PPD8 638 aa16.31■□□□□ 0.2
PPM1A-201ENST00000325642 GAPVD1Q14C86 1478 aa16.3■□□□□ 0.2
PPM1A-201ENST00000325642 PRDM2Q13029 1718 aa16.28■□□□□ 0.2
PPM1A-201ENST00000325642 SYNJ1O43426 1573 aa16.27■□□□□ 0.2
PPM1A-201ENST00000325642 ABCC8Q09428 1581 aa16.27■□□□□ 0.19
PPM1A-201ENST00000325642 TARBP1Q13395 1621 aaKnown RBP16.26■□□□□ 0.19
PPM1A-201ENST00000325642 CHMP7Q8WUX9 453 aaPredicted RBP16.24■□□□□ 0.19
PPM1A-201ENST00000325642 DNMBPQ6XZF7 1577 aa16.2■□□□□ 0.18
PPM1A-201ENST00000325642 SNAPC4Q5SXM2 1469 aa16.19■□□□□ 0.18
PPM1A-201ENST00000325642 KIF13AQ9H1H9 1805 aa16.15■□□□□ 0.18
PPM1A-201ENST00000325642 TDRD9Q8NDG6 1382 aaKnown RBP16.15■□□□□ 0.18
PPM1A-201ENST00000325642 TOP2AP11388 1531 aaKnown RBP16.12■□□□□ 0.17
PPM1A-201ENST00000325642 POLA1P09884 1462 aaPredicted RBP16.12■□□□□ 0.17
PPM1A-201ENST00000325642 MAGI1Q96QZ7 1491 aaPredicted RBP16.11■□□□□ 0.17
PPM1A-201ENST00000325642 ERCC6L2Q5T890 1561 aa16.1■□□□□ 0.17
PPM1A-201ENST00000325642 FBXO41Q8TF61 875 aa16.09■□□□□ 0.17
PPM1A-201ENST00000325642 SYNJ2O15056 1496 aa16.08■□□□□ 0.16
PPM1A-201ENST00000325642 RAD54L2Q9Y4B4 1467 aa16.08■□□□□ 0.16
PPM1A-201ENST00000325642 SOGA1O94964 1423 aa16.04■□□□□ 0.16
PPM1A-201ENST00000325642 WDR97A6NE52 1622 aa16.04■□□□□ 0.16
PPM1A-201ENST00000325642 FAM69CQ0P6D2 419 aa16.02■□□□□ 0.16
PPM1A-201ENST00000325642 HECW2Q9P2P5 1572 aa16.02■□□□□ 0.16
PPM1A-201ENST00000325642 GRIN2BQ13224 1484 aa16.02■□□□□ 0.15
PPM1A-201ENST00000325642 KDM6BO15054 1643 aa16.01■□□□□ 0.15
PPM1A-201ENST00000325642 ABCC10Q5T3U5 1492 aa15.97■□□□□ 0.15
PPM1A-201ENST00000325642 SUPT5HO00267 1087 aaKnown RBP15.97■□□□□ 0.15
PPM1A-201ENST00000325642 LMTK3Q96Q04 1460 aa15.97■□□□□ 0.15
PPM1A-201ENST00000325642 CCDC88BA6NC98 1476 aa15.96■□□□□ 0.15
PPM1A-201ENST00000325642 ADGRL1O94910 1474 aa15.93■□□□□ 0.14
PPM1A-201ENST00000325642 CEP170Q5SW79 1584 aa15.91■□□□□ 0.14
PPM1A-201ENST00000325642 FGD5Q6ZNL6 1462 aa15.88■□□□□ 0.13
PPM1A-201ENST00000325642 DIP2BQ9P265 1576 aa15.87■□□□□ 0.13
PPM1A-201ENST00000325642 SOCS7O14512 581 aa15.87■□□□□ 0.13
PPM1A-201ENST00000325642 NPM1P06748 294 aaKnown RBP eCLIP15.85■□□□□ 0.13
PPM1A-201ENST00000325642 PBRM1Q86U86 1689 aa15.84■□□□□ 0.13
PPM1A-201ENST00000325642 MAPKBP1O60336 1514 aa15.83■□□□□ 0.13
PPM1A-201ENST00000325642 TSPOAP1O95153 1857 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms