RNA–Protein interactions for RNA: ENST00000458564.5

HDLBP-227, Transcript of high density lipoprotein binding protein, humanhuman

TSL 3

Gene HDLBP, Length 420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-227ENST00000458564 NISCHQ9Y2I1 1504 aa26.49■■□□□ 1.83
HDLBP-227ENST00000458564 ABCC9O60706 1549 aa23.86■■□□□ 1.41
HDLBP-227ENST00000458564 CCDC180Q9P1Z9 1646 aa23.84■■□□□ 1.41
HDLBP-227ENST00000458564 RB1CC1Q8TDY2 1594 aa22.72■■□□□ 1.23
HDLBP-227ENST00000458564 NACADO15069 1562 aa22.56■■□□□ 1.2
HDLBP-227ENST00000458564 DNAJC5BQ9UF47 199 aa22.47■■□□□ 1.19
HDLBP-227ENST00000458564 MYO15BQ96JP2 1530 aa22.28■■□□□ 1.16
HDLBP-227ENST00000458564 DCAF8L2P0C7V8 631 aa22.24■■□□□ 1.15
HDLBP-227ENST00000458564 PABPN1Q86U42 306 aaKnown RBP eCLIP22.16■■□□□ 1.14
HDLBP-227ENST00000458564 UNC13AQ9UPW8 1703 aa22.15■■□□□ 1.14
HDLBP-227ENST00000458564 BICRAQ9NZM4 1560 aa22.07■■□□□ 1.12
HDLBP-227ENST00000458564 ZCCHC6Q5VYS8 1495 aaKnown RBP21.96■■□□□ 1.11
HDLBP-227ENST00000458564 DCAF1Q9Y4B6 1507 aa21.94■■□□□ 1.1
HDLBP-227ENST00000458564 SHROOM4Q9ULL8 1493 aa21.86■■□□□ 1.09
HDLBP-227ENST00000458564 SCRIBQ14160 1630 aa21.64■■□□□ 1.05
HDLBP-227ENST00000458564 CC2D2AQ9P2K1 1620 aa21.58■■□□□ 1.04
HDLBP-227ENST00000458564 CECR2Q9BXF3 1484 aa21.54■■□□□ 1.04
HDLBP-227ENST00000458564 EIF4G1Q04637 1599 aaKnown RBP21.53■■□□□ 1.04
HDLBP-227ENST00000458564 NCAPD3P42695 1498 aa20.84■□□□□ 0.93
HDLBP-227ENST00000458564 DNAJC5Q9H3Z4 198 aa20.76■□□□□ 0.91
HDLBP-227ENST00000458564 ATAD2BQ9ULI0 1458 aa20.74■□□□□ 0.91
HDLBP-227ENST00000458564 CUX2O14529 1486 aa20.69■□□□□ 0.9
HDLBP-227ENST00000458564 HMGXB3Q12766 1538 aa20.68■□□□□ 0.9
HDLBP-227ENST00000458564 SMARCA2P51531 1590 aa20.68■□□□□ 0.9
HDLBP-227ENST00000458564 SMARCA4P51532 1647 aa20.67■□□□□ 0.9
HDLBP-227ENST00000458564 ERCC6Q03468 1493 aa20.62■□□□□ 0.89
HDLBP-227ENST00000458564 BAZ1AQ9NRL2 1556 aaPredicted RBP20.58■□□□□ 0.88
HDLBP-227ENST00000458564 PEG3Q9GZU2 1588 aa20.54■□□□□ 0.88
HDLBP-227ENST00000458564 BAZ1BQ9UIG0 1483 aaKnown RBP20.51■□□□□ 0.87
HDLBP-227ENST00000458564 NESP48681 1621 aa20.47■□□□□ 0.87
HDLBP-227ENST00000458564 MROH2BQ7Z745 1585 aa20.38■□□□□ 0.85
HDLBP-227ENST00000458564 LAMC3Q9Y6N6 1575 aa20.38■□□□□ 0.85
HDLBP-227ENST00000458564 THOC2Q8NI27 1593 aaKnown RBP20.34■□□□□ 0.85
HDLBP-227ENST00000458564 PDS5BQ9NTI5 1447 aa20.25■□□□□ 0.83
HDLBP-227ENST00000458564 KIF21AQ7Z4S6 1674 aa20.2■□□□□ 0.82
HDLBP-227ENST00000458564 CADPSQ9ULU8 1353 aa20.18■□□□□ 0.82
HDLBP-227ENST00000458564 WIZO95785 1651 aa20.1■□□□□ 0.81
HDLBP-227ENST00000458564 MRC2Q9UBG0 1479 aa20.08■□□□□ 0.81
HDLBP-227ENST00000458564 WDR62O43379 1518 aa20.06■□□□□ 0.8
HDLBP-227ENST00000458564 CEP164Q9UPV0 1460 aa19.97■□□□□ 0.79
HDLBP-227ENST00000458564 CFTRP13569 1480 aa19.94■□□□□ 0.78
HDLBP-227ENST00000458564 RSF1Q96T23 1441 aaPredicted RBP19.93■□□□□ 0.78
HDLBP-227ENST00000458564 FANCD2Q9BXW9 1451 aa19.93■□□□□ 0.78
HDLBP-227ENST00000458564 TOP2AP11388 1531 aaKnown RBP19.89■□□□□ 0.77
HDLBP-227ENST00000458564 URB2Q14146 1524 aaKnown RBP19.77■□□□□ 0.76
HDLBP-227ENST00000458564 TRIM41Q8WV44 630 aa19.71■□□□□ 0.75
HDLBP-227ENST00000458564 PRDM2Q13029 1718 aa19.69■□□□□ 0.74
HDLBP-227ENST00000458564 OSCARQ8IYS5 282 aa19.66■□□□□ 0.74
HDLBP-227ENST00000458564 CCDC88BA6NC98 1476 aa19.64■□□□□ 0.73
HDLBP-227ENST00000458564 IFT140Q96RY7 1462 aa19.59■□□□□ 0.73
HDLBP-227ENST00000458564 TOPBP1Q92547 1522 aa19.55■□□□□ 0.72
HDLBP-227ENST00000458564 ZNF608Q9ULD9 1512 aaPredicted RBP19.53■□□□□ 0.72
HDLBP-227ENST00000458564 ABCC8Q09428 1581 aa19.52■□□□□ 0.71
HDLBP-227ENST00000458564 DNMBPQ6XZF7 1577 aa19.47■□□□□ 0.71
HDLBP-227ENST00000458564 EIF4G3O43432 1585 aaKnown RBP19.44■□□□□ 0.7
HDLBP-227ENST00000458564 RIMBP3CA6NJZ7 1639 aa19.43■□□□□ 0.7
HDLBP-227ENST00000458564 RIMBP3BA6NNM3 1639 aa19.43■□□□□ 0.7
HDLBP-227ENST00000458564 RIMBP3Q9UFD9 1639 aa19.43■□□□□ 0.7
HDLBP-227ENST00000458564 ARHGEF11O15085 1522 aa19.39■□□□□ 0.69
HDLBP-227ENST00000458564 TARBP1Q13395 1621 aaKnown RBP19.39■□□□□ 0.69
HDLBP-227ENST00000458564 POLA1P09884 1462 aaPredicted RBP19.35■□□□□ 0.69
HDLBP-227ENST00000458564 AQRO60306 1485 aaKnown RBP eCLIP19.32■□□□□ 0.682e-16■■■■□ 25
HDLBP-227ENST00000458564 CHD1O14646 1710 aa19.27■□□□□ 0.68
HDLBP-227ENST00000458564 WDR97A6NE52 1622 aa19.24■□□□□ 0.67
HDLBP-227ENST00000458564 RAD54L2Q9Y4B4 1467 aa19.23■□□□□ 0.67
HDLBP-227ENST00000458564 SOGA1O94964 1423 aa19.22■□□□□ 0.67
HDLBP-227ENST00000458564 FGD5Q6ZNL6 1462 aa19.19■□□□□ 0.66
HDLBP-227ENST00000458564 ARAP1Q96P48 1450 aa19.19■□□□□ 0.66
HDLBP-227ENST00000458564 TDRD9Q8NDG6 1382 aaKnown RBP19.19■□□□□ 0.66
HDLBP-227ENST00000458564 CYB5RLQ6IPT4 315 aa19.17■□□□□ 0.66
HDLBP-227ENST00000458564 CUX1P39880 1505 aa19.16■□□□□ 0.66
HDLBP-227ENST00000458564 FBLN2P98095 1184 aa19.15■□□□□ 0.66
HDLBP-227ENST00000458564 SNAPC4Q5SXM2 1469 aa19.15■□□□□ 0.66
HDLBP-227ENST00000458564 MAGI1Q96QZ7 1491 aaPredicted RBP19.14■□□□□ 0.65
HDLBP-227ENST00000458564 CLASP1Q7Z460 1538 aa19.12■□□□□ 0.65
HDLBP-227ENST00000458564 GRIN2BQ13224 1484 aa19.1■□□□□ 0.65
HDLBP-227ENST00000458564 SYNJ1O43426 1573 aa19.07■□□□□ 0.64
HDLBP-227ENST00000458564 SYNJ2O15056 1496 aa19.06■□□□□ 0.64
HDLBP-227ENST00000458564 CHMP7Q8WUX9 453 aaPredicted RBP19.04■□□□□ 0.64
HDLBP-227ENST00000458564 GAPVD1Q14C86 1478 aa19.01■□□□□ 0.63
HDLBP-227ENST00000458564 ABCA10Q8WWZ4 1543 aa19■□□□□ 0.63
HDLBP-227ENST00000458564 ABCA5Q8WWZ7 1642 aa18.98■□□□□ 0.63
HDLBP-227ENST00000458564 PBRM1Q86U86 1689 aa18.98■□□□□ 0.63
HDLBP-227ENST00000458564 TRHP20396 242 aaPredicted RBP18.96■□□□□ 0.63
HDLBP-227ENST00000458564 WRNQ14191 1432 aaPredicted RBP eCLIP18.89■□□□□ 0.61
HDLBP-227ENST00000458564 GRIN2AQ12879 1464 aa18.85■□□□□ 0.61
HDLBP-227ENST00000458564 SUPT5HO00267 1087 aaKnown RBP18.84■□□□□ 0.61
HDLBP-227ENST00000458564 TOP2BQ02880 1626 aa18.84■□□□□ 0.61
HDLBP-227ENST00000458564 BIVM-ERCC5R4GMW8 1640 aa18.84■□□□□ 0.61
HDLBP-227ENST00000458564 ADAMTS12P58397 1594 aa18.84■□□□□ 0.61
HDLBP-227ENST00000458564 NUP160Q12769 1436 aa18.83■□□□□ 0.6
HDLBP-227ENST00000458564 CEP170Q5SW79 1584 aa18.78■□□□□ 0.6
HDLBP-227ENST00000458564 FHAD1B1AJZ9 1412 aa18.77■□□□□ 0.6
HDLBP-227ENST00000458564 ERICH3Q5RHP9 1530 aa18.76■□□□□ 0.59
HDLBP-227ENST00000458564 ERCC6L2Q5T890 1561 aa18.76■□□□□ 0.59
HDLBP-227ENST00000458564 SHROOM2Q13796 1616 aa18.74■□□□□ 0.59
HDLBP-227ENST00000458564 PRG4Q92954 1404 aaPredicted RBP18.59■□□□□ 0.57
HDLBP-227ENST00000458564 RUSC2Q8N2Y8 1516 aa18.58■□□□□ 0.56
HDLBP-227ENST00000458564 JPH4Q96JJ6 628 aa18.56■□□□□ 0.56
HDLBP-227ENST00000458564 KIF13AQ9H1H9 1805 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms