RNA–Protein interactions for RNA: ENST00000294072.8

CYB561A3-201, Transcript of cytochrome b561 family member A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CYB561A3, Length 3,061 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYB561A3-201ENST00000294072 NISCHQ9Y2I1 1504 aa23.68■■□□□ 1.38
CYB561A3-201ENST00000294072 CCDC180Q9P1Z9 1646 aa20.57■□□□□ 0.88
CYB561A3-201ENST00000294072 ZCCHC6Q5VYS8 1495 aaKnown RBP19.87■□□□□ 0.77
CYB561A3-201ENST00000294072 DCAF8L2P0C7V8 631 aa19.78■□□□□ 0.76
CYB561A3-201ENST00000294072 ABCC9O60706 1549 aa19.68■□□□□ 0.74
CYB561A3-201ENST00000294072 SHROOM4Q9ULL8 1493 aa19.51■□□□□ 0.71
CYB561A3-201ENST00000294072 DCAF1Q9Y4B6 1507 aa19.47■□□□□ 0.71
CYB561A3-201ENST00000294072 MYO15BQ96JP2 1530 aa19.22■□□□□ 0.67
CYB561A3-201ENST00000294072 NACADO15069 1562 aa19.19■□□□□ 0.66
CYB561A3-201ENST00000294072 SCRIBQ14160 1630 aa19.08■□□□□ 0.65
CYB561A3-201ENST00000294072 RB1CC1Q8TDY2 1594 aa19.06■□□□□ 0.64
CYB561A3-201ENST00000294072 UNC13AQ9UPW8 1703 aa18.76■□□□□ 0.59
CYB561A3-201ENST00000294072 SUPT5HO00267 1087 aaKnown RBP18.73■□□□□ 0.59
CYB561A3-201ENST00000294072 PABPN1Q86U42 306 aaKnown RBP eCLIP18.61■□□□□ 0.57
CYB561A3-201ENST00000294072 BICRAQ9NZM4 1560 aa18.54■□□□□ 0.56
CYB561A3-201ENST00000294072 CECR2Q9BXF3 1484 aa18.49■□□□□ 0.55
CYB561A3-201ENST00000294072 RSF1Q96T23 1441 aaPredicted RBP18.39■□□□□ 0.54
CYB561A3-201ENST00000294072 MROH2BQ7Z745 1585 aa18.35■□□□□ 0.53
CYB561A3-201ENST00000294072 BAZ1AQ9NRL2 1556 aaPredicted RBP18.26■□□□□ 0.51
CYB561A3-201ENST00000294072 WIZO95785 1651 aa18.22■□□□□ 0.51
CYB561A3-201ENST00000294072 SMARCA4P51532 1647 aa18.21■□□□□ 0.51
CYB561A3-201ENST00000294072 EIF4G1Q04637 1599 aaKnown RBP17.98■□□□□ 0.47
CYB561A3-201ENST00000294072 TOP2AP11388 1531 aaKnown RBP17.94■□□□□ 0.46
CYB561A3-201ENST00000294072 ATAD2BQ9ULI0 1458 aa17.94■□□□□ 0.46
CYB561A3-201ENST00000294072 PEG3Q9GZU2 1588 aa17.92■□□□□ 0.46
CYB561A3-201ENST00000294072 SMARCA2P51531 1590 aa17.86■□□□□ 0.45
CYB561A3-201ENST00000294072 BAZ1BQ9UIG0 1483 aaKnown RBP17.83■□□□□ 0.45
CYB561A3-201ENST00000294072 CHIC1Q5VXU3 224 aa17.83■□□□□ 0.45
CYB561A3-201ENST00000294072 CCDC88BA6NC98 1476 aa17.81■□□□□ 0.44
CYB561A3-201ENST00000294072 CC2D2AQ9P2K1 1620 aa17.75■□□□□ 0.43
CYB561A3-201ENST00000294072 HRCP23327 699 aa17.74■□□□□ 0.43
CYB561A3-201ENST00000294072 NCAPD3P42695 1498 aa17.73■□□□□ 0.43
CYB561A3-201ENST00000294072 PELP1Q8IZL8 1130 aaKnown RBP17.71■□□□□ 0.43
CYB561A3-201ENST00000294072 HMGXB3Q12766 1538 aa17.69■□□□□ 0.42
CYB561A3-201ENST00000294072 TRIM41Q8WV44 630 aa17.53■□□□□ 0.4
CYB561A3-201ENST00000294072 ABCC8Q09428 1581 aa17.5■□□□□ 0.39
CYB561A3-201ENST00000294072 DNAJC5BQ9UF47 199 aa17.48■□□□□ 0.39
CYB561A3-201ENST00000294072 CFTRP13569 1480 aa17.36■□□□□ 0.37
CYB561A3-201ENST00000294072 PPARGC1BQ86YN6 1023 aaKnown RBP17.36■□□□□ 0.37
CYB561A3-201ENST00000294072 FAM9AQ8IZU1 332 aaPredicted RBP17.33■□□□□ 0.36
CYB561A3-201ENST00000294072 CADPSQ9ULU8 1353 aa17.32■□□□□ 0.36
CYB561A3-201ENST00000294072 WRNQ14191 1432 aaPredicted RBP eCLIP17.31■□□□□ 0.36
CYB561A3-201ENST00000294072 NESP48681 1621 aa17.28■□□□□ 0.36
CYB561A3-201ENST00000294072 PCGF6Q9BYE7 350 aa17.27■□□□□ 0.36
CYB561A3-201ENST00000294072 SYNJ1O43426 1573 aa17.27■□□□□ 0.35
CYB561A3-201ENST00000294072 LOC105371045A0A1W2PR82 267 aa17.25■□□□□ 0.35
CYB561A3-201ENST00000294072 PRDM2Q13029 1718 aa17.23■□□□□ 0.35
CYB561A3-201ENST00000294072 EHMT2Q96KQ7 1210 aa17.19■□□□□ 0.34
CYB561A3-201ENST00000294072 SOGA1O94964 1423 aa17.15■□□□□ 0.34
CYB561A3-201ENST00000294072 FANCD2Q9BXW9 1451 aa17.15■□□□□ 0.34
CYB561A3-201ENST00000294072 CUX1P39880 1505 aa17.15■□□□□ 0.34
CYB561A3-201ENST00000294072 MYT1Q01538 1121 aa17.14■□□□□ 0.33
CYB561A3-201ENST00000294072 TOP2BQ02880 1626 aa17.14■□□□□ 0.33
CYB561A3-201ENST00000294072 LAMC3Q9Y6N6 1575 aa17.13■□□□□ 0.33
CYB561A3-201ENST00000294072 RUSC2Q8N2Y8 1516 aa17.12■□□□□ 0.33
CYB561A3-201ENST00000294072 BIVM-ERCC5R4GMW8 1640 aa17.1■□□□□ 0.33
CYB561A3-201ENST00000294072 CEP164Q9UPV0 1460 aa17.03■□□□□ 0.32
CYB561A3-201ENST00000294072 PDS5BQ9NTI5 1447 aa17.02■□□□□ 0.32
CYB561A3-201ENST00000294072 SCAF1Q9H7N4 1312 aaKnown RBP17.02■□□□□ 0.32
CYB561A3-201ENST00000294072 KIF21AQ7Z4S6 1674 aa17.02■□□□□ 0.31
CYB561A3-201ENST00000294072 CSRNP3Q8WYN3 585 aa16.97■□□□□ 0.31
CYB561A3-201ENST00000294072 FGD5Q6ZNL6 1462 aa16.97■□□□□ 0.31
CYB561A3-201ENST00000294072 TOPBP1Q92547 1522 aa16.96■□□□□ 0.3
CYB561A3-201ENST00000294072 URB2Q14146 1524 aaKnown RBP16.95■□□□□ 0.3
CYB561A3-201ENST00000294072 DNMBPQ6XZF7 1577 aa16.95■□□□□ 0.3
CYB561A3-201ENST00000294072 EEA1Q15075 1411 aa16.94■□□□□ 0.3
CYB561A3-201ENST00000294072 POLA1P09884 1462 aaPredicted RBP16.88■□□□□ 0.29
CYB561A3-201ENST00000294072 RAD54L2Q9Y4B4 1467 aa16.88■□□□□ 0.29
CYB561A3-201ENST00000294072 CUX2O14529 1486 aa16.86■□□□□ 0.29
CYB561A3-201ENST00000294072 KIF27Q86VH2 1401 aa16.85■□□□□ 0.29
CYB561A3-201ENST00000294072 ERCC6Q03468 1493 aa16.83■□□□□ 0.29
CYB561A3-201ENST00000294072 UBTFP17480 764 aaKnown RBP16.81■□□□□ 0.28
CYB561A3-201ENST00000294072 MRC2Q9UBG0 1479 aa16.81■□□□□ 0.28
CYB561A3-201ENST00000294072 GOLGA3Q08378 1498 aa16.78■□□□□ 0.28
CYB561A3-201ENST00000294072 RAPGEF2Q9Y4G8 1499 aa16.78■□□□□ 0.28
CYB561A3-201ENST00000294072 KIF21BO75037 1637 aa16.77■□□□□ 0.28
CYB561A3-201ENST00000294072 ABCA10Q8WWZ4 1543 aa16.76■□□□□ 0.27
CYB561A3-201ENST00000294072 IGF1RP08069 1367 aa16.74■□□□□ 0.27
CYB561A3-201ENST00000294072 TDRD9Q8NDG6 1382 aaKnown RBP16.73■□□□□ 0.27
CYB561A3-201ENST00000294072 PRXQ9BXM0 1461 aa16.73■□□□□ 0.27
CYB561A3-201ENST00000294072 TNIKQ9UKE5 1360 aa16.72■□□□□ 0.27
CYB561A3-201ENST00000294072 WDR62O43379 1518 aa16.71■□□□□ 0.27
CYB561A3-201ENST00000294072 WDR97A6NE52 1622 aa16.71■□□□□ 0.27
CYB561A3-201ENST00000294072 THOC2Q8NI27 1593 aaKnown RBP16.7■□□□□ 0.26
CYB561A3-201ENST00000294072 TARBP1Q13395 1621 aaKnown RBP16.69■□□□□ 0.26
CYB561A3-201ENST00000294072 RANGAP1P46060 587 aaPredicted RBP16.68■□□□□ 0.26
CYB561A3-201ENST00000294072 CEP162Q5TB80 1403 aa16.68■□□□□ 0.26
CYB561A3-201ENST00000294072 CARMIL1Q5VZK9 1371 aa16.65■□□□□ 0.26
CYB561A3-201ENST00000294072 ERICH3Q5RHP9 1530 aa16.65■□□□□ 0.26
CYB561A3-201ENST00000294072 ABCA5Q8WWZ7 1642 aa16.63■□□□□ 0.25
CYB561A3-201ENST00000294072 GAPVD1Q14C86 1478 aa16.63■□□□□ 0.25
CYB561A3-201ENST00000294072 AQRO60306 1485 aaKnown RBP eCLIP16.63■□□□□ 0.25
CYB561A3-201ENST00000294072 ZNF608Q9ULD9 1512 aaPredicted RBP16.61■□□□□ 0.25
CYB561A3-201ENST00000294072 IFT140Q96RY7 1462 aa16.59■□□□□ 0.25
CYB561A3-201ENST00000294072 CLIP1P30622 1438 aa16.55■□□□□ 0.24
CYB561A3-201ENST00000294072 CUL7Q14999 1698 aa16.54■□□□□ 0.24
CYB561A3-201ENST00000294072 PBRM1Q86U86 1689 aa16.53■□□□□ 0.24
CYB561A3-201ENST00000294072 ZEB1P37275 1124 aaPredicted RBP16.5■□□□□ 0.23
CYB561A3-201ENST00000294072 TRIM26Q12899 539 aaPredicted RBP16.5■□□□□ 0.23
CYB561A3-201ENST00000294072 EIF4G3O43432 1585 aaKnown RBP16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms