RNA–Protein interactions for RNA: ENST00000536452.1

CYB561A3-206, Transcript of cytochrome b561 family member A3, humanhuman

TSL 2

Gene CYB561A3, Length 1,827 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYB561A3-206ENST00000536452 NISCHQ9Y2I1 1504 aa31.02■■■□□ 2.56
CYB561A3-206ENST00000536452 CCDC180Q9P1Z9 1646 aa27.67■■■□□ 2.02
CYB561A3-206ENST00000536452 ABCC9O60706 1549 aa27.14■■□□□ 1.93
CYB561A3-206ENST00000536452 RB1CC1Q8TDY2 1594 aa26.04■■□□□ 1.76
CYB561A3-206ENST00000536452 NACADO15069 1562 aa25.97■■□□□ 1.75
CYB561A3-206ENST00000536452 DCAF8L2P0C7V8 631 aa25.86■■□□□ 1.73
CYB561A3-206ENST00000536452 ZCCHC6Q5VYS8 1495 aaKnown RBP25.84■■□□□ 1.73
CYB561A3-206ENST00000536452 MYO15BQ96JP2 1530 aa25.76■■□□□ 1.72
CYB561A3-206ENST00000536452 DCAF1Q9Y4B6 1507 aa25.64■■□□□ 1.69
CYB561A3-206ENST00000536452 UNC13AQ9UPW8 1703 aa25.61■■□□□ 1.69
CYB561A3-206ENST00000536452 BICRAQ9NZM4 1560 aa25.33■■□□□ 1.65
CYB561A3-206ENST00000536452 PABPN1Q86U42 306 aaKnown RBP eCLIP25.29■■□□□ 1.64
CYB561A3-206ENST00000536452 SCRIBQ14160 1630 aa25.25■■□□□ 1.63
CYB561A3-206ENST00000536452 DNAJC5BQ9UF47 199 aa24.98■■□□□ 1.59
CYB561A3-206ENST00000536452 SHROOM4Q9ULL8 1493 aa24.95■■□□□ 1.58
CYB561A3-206ENST00000536452 EIF4G1Q04637 1599 aaKnown RBP24.64■■□□□ 1.54
CYB561A3-206ENST00000536452 CC2D2AQ9P2K1 1620 aa24.57■■□□□ 1.52
CYB561A3-206ENST00000536452 CECR2Q9BXF3 1484 aa24.37■■□□□ 1.49
CYB561A3-206ENST00000536452 SMARCA4P51532 1647 aa24.14■■□□□ 1.45
CYB561A3-206ENST00000536452 BAZ1AQ9NRL2 1556 aaPredicted RBP24.04■■□□□ 1.44
CYB561A3-206ENST00000536452 ATAD2BQ9ULI0 1458 aa23.97■■□□□ 1.43
CYB561A3-206ENST00000536452 NCAPD3P42695 1498 aa23.95■■□□□ 1.42
CYB561A3-206ENST00000536452 SMARCA2P51531 1590 aa23.93■■□□□ 1.42
CYB561A3-206ENST00000536452 MROH2BQ7Z745 1585 aa23.93■■□□□ 1.42
CYB561A3-206ENST00000536452 PEG3Q9GZU2 1588 aa23.88■■□□□ 1.41
CYB561A3-206ENST00000536452 HMGXB3Q12766 1538 aa23.87■■□□□ 1.41
CYB561A3-206ENST00000536452 BAZ1BQ9UIG0 1483 aaKnown RBP23.77■■□□□ 1.4
CYB561A3-206ENST00000536452 WIZO95785 1651 aa23.71■■□□□ 1.39
CYB561A3-206ENST00000536452 RSF1Q96T23 1441 aaPredicted RBP23.58■■□□□ 1.37
CYB561A3-206ENST00000536452 NESP48681 1621 aa23.48■■□□□ 1.35
CYB561A3-206ENST00000536452 TOP2AP11388 1531 aaKnown RBP23.4■■□□□ 1.34
CYB561A3-206ENST00000536452 LAMC3Q9Y6N6 1575 aa23.37■■□□□ 1.33
CYB561A3-206ENST00000536452 ERCC6Q03468 1493 aa23.36■■□□□ 1.33
CYB561A3-206ENST00000536452 KIF21AQ7Z4S6 1674 aa23.27■■□□□ 1.32
CYB561A3-206ENST00000536452 CADPSQ9ULU8 1353 aa23.22■■□□□ 1.31
CYB561A3-206ENST00000536452 THOC2Q8NI27 1593 aaKnown RBP23.19■■□□□ 1.3
CYB561A3-206ENST00000536452 PDS5BQ9NTI5 1447 aa23.15■■□□□ 1.3
CYB561A3-206ENST00000536452 CUX2O14529 1486 aa23.14■■□□□ 1.3
CYB561A3-206ENST00000536452 CFTRP13569 1480 aa23.11■■□□□ 1.29
CYB561A3-206ENST00000536452 CCDC88BA6NC98 1476 aa23.1■■□□□ 1.29
CYB561A3-206ENST00000536452 PRDM2Q13029 1718 aa23.05■■□□□ 1.28
CYB561A3-206ENST00000536452 FANCD2Q9BXW9 1451 aa23■■□□□ 1.27
CYB561A3-206ENST00000536452 CEP164Q9UPV0 1460 aa22.99■■□□□ 1.27
CYB561A3-206ENST00000536452 MRC2Q9UBG0 1479 aa22.97■■□□□ 1.27
CYB561A3-206ENST00000536452 SUPT5HO00267 1087 aaKnown RBP22.96■■□□□ 1.27
CYB561A3-206ENST00000536452 WDR62O43379 1518 aa22.94■■□□□ 1.26
CYB561A3-206ENST00000536452 URB2Q14146 1524 aaKnown RBP22.82■■□□□ 1.24
CYB561A3-206ENST00000536452 TOPBP1Q92547 1522 aa22.65■■□□□ 1.22
CYB561A3-206ENST00000536452 DNMBPQ6XZF7 1577 aa22.62■■□□□ 1.21
CYB561A3-206ENST00000536452 ABCC8Q09428 1581 aa22.55■■□□□ 1.2
CYB561A3-206ENST00000536452 DNAJC5Q9H3Z4 198 aa22.5■■□□□ 1.19
CYB561A3-206ENST00000536452 IFT140Q96RY7 1462 aa22.48■■□□□ 1.19
CYB561A3-206ENST00000536452 CUX1P39880 1505 aa22.46■■□□□ 1.19
CYB561A3-206ENST00000536452 POLA1P09884 1462 aaPredicted RBP22.45■■□□□ 1.18
CYB561A3-206ENST00000536452 ZNF608Q9ULD9 1512 aaPredicted RBP22.45■■□□□ 1.18
CYB561A3-206ENST00000536452 TARBP1Q13395 1621 aaKnown RBP22.45■■□□□ 1.18
CYB561A3-206ENST00000536452 EIF4G3O43432 1585 aaKnown RBP22.4■■□□□ 1.18
CYB561A3-206ENST00000536452 FGD5Q6ZNL6 1462 aa22.38■■□□□ 1.17
CYB561A3-206ENST00000536452 RAD54L2Q9Y4B4 1467 aa22.35■■□□□ 1.17
CYB561A3-206ENST00000536452 WDR97A6NE52 1622 aa22.29■■□□□ 1.16
CYB561A3-206ENST00000536452 SOGA1O94964 1423 aa22.29■■□□□ 1.16
CYB561A3-206ENST00000536452 AQRO60306 1485 aaKnown RBP eCLIP22.28■■□□□ 1.16
CYB561A3-206ENST00000536452 BIVM-ERCC5R4GMW8 1640 aa22.27■■□□□ 1.15
CYB561A3-206ENST00000536452 SYNJ1O43426 1573 aa22.26■■□□□ 1.15
CYB561A3-206ENST00000536452 TOP2BQ02880 1626 aa22.24■■□□□ 1.15
CYB561A3-206ENST00000536452 WRNQ14191 1432 aaPredicted RBP eCLIP22.22■■□□□ 1.15
CYB561A3-206ENST00000536452 TDRD9Q8NDG6 1382 aaKnown RBP22.2■■□□□ 1.14
CYB561A3-206ENST00000536452 CHIC1Q5VXU3 224 aa22.2■■□□□ 1.14
CYB561A3-206ENST00000536452 CHD1O14646 1710 aa22.17■■□□□ 1.14
CYB561A3-206ENST00000536452 ABCA10Q8WWZ4 1543 aa22.14■■□□□ 1.13
CYB561A3-206ENST00000536452 PBRM1Q86U86 1689 aa22.13■■□□□ 1.13
CYB561A3-206ENST00000536452 ABCA5Q8WWZ7 1642 aa22.13■■□□□ 1.13
CYB561A3-206ENST00000536452 SNAPC4Q5SXM2 1469 aa22.09■■□□□ 1.13
CYB561A3-206ENST00000536452 OSCARQ8IYS5 282 aa22.09■■□□□ 1.13
CYB561A3-206ENST00000536452 GRIN2BQ13224 1484 aa22.06■■□□□ 1.12
CYB561A3-206ENST00000536452 GAPVD1Q14C86 1478 aa22.06■■□□□ 1.12
CYB561A3-206ENST00000536452 MAGI1Q96QZ7 1491 aaPredicted RBP22.02■■□□□ 1.12
CYB561A3-206ENST00000536452 FBLN2P98095 1184 aa21.96■■□□□ 1.11
CYB561A3-206ENST00000536452 SYNJ2O15056 1496 aa21.95■■□□□ 1.1
CYB561A3-206ENST00000536452 ADAMTS12P58397 1594 aa21.92■■□□□ 1.1
CYB561A3-206ENST00000536452 RIMBP3CA6NJZ7 1639 aa21.9■■□□□ 1.1
CYB561A3-206ENST00000536452 RIMBP3BA6NNM3 1639 aa21.9■■□□□ 1.1
CYB561A3-206ENST00000536452 RIMBP3Q9UFD9 1639 aa21.9■■□□□ 1.1
CYB561A3-206ENST00000536452 ERICH3Q5RHP9 1530 aa21.87■■□□□ 1.09
CYB561A3-206ENST00000536452 CLASP1Q7Z460 1538 aa21.87■■□□□ 1.09
CYB561A3-206ENST00000536452 CHMP7Q8WUX9 453 aaPredicted RBP21.87■■□□□ 1.09
CYB561A3-206ENST00000536452 ARHGEF11O15085 1522 aa21.86■■□□□ 1.09
CYB561A3-206ENST00000536452 GRIN2AQ12879 1464 aa21.81■■□□□ 1.08
CYB561A3-206ENST00000536452 FHAD1B1AJZ9 1412 aa21.78■■□□□ 1.08
CYB561A3-206ENST00000536452 CEP170Q5SW79 1584 aa21.76■■□□□ 1.07
CYB561A3-206ENST00000536452 TRIM41Q8WV44 630 aa21.75■■□□□ 1.07
CYB561A3-206ENST00000536452 KIF27Q86VH2 1401 aa21.73■■□□□ 1.07
CYB561A3-206ENST00000536452 NUP160Q12769 1436 aa21.71■■□□□ 1.07
CYB561A3-206ENST00000536452 CUL7Q14999 1698 aa21.69■■□□□ 1.06
CYB561A3-206ENST00000536452 ARAP1Q96P48 1450 aa21.69■■□□□ 1.06
CYB561A3-206ENST00000536452 IGF1RP08069 1367 aa21.66■■□□□ 1.06
CYB561A3-206ENST00000536452 SHROOM2Q13796 1616 aa21.61■■□□□ 1.05
CYB561A3-206ENST00000536452 RUSC2Q8N2Y8 1516 aa21.61■■□□□ 1.05
CYB561A3-206ENST00000536452 ERCC6L2Q5T890 1561 aa21.6■■□□□ 1.05
CYB561A3-206ENST00000536452 CYB5RLQ6IPT4 315 aa21.57■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms