RNA–Protein interactions for RNA: ENST00000531143.6

PPM1A-206, Transcript of protein phosphatase, Mg2+/Mn2+ dependent 1A, humanhuman

TSL 1 (best)

Gene PPM1A, Length 1,546 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPM1A-206ENST00000531143 AEBP2Q6ZN18 517 aaPredicted RBP20.74■□□□□ 0.91
PPM1A-206ENST00000531143 CHIC1Q5VXU3 224 aa19.95■□□□□ 0.78
PPM1A-206ENST00000531143 NISCHQ9Y2I1 1504 aa18.6■□□□□ 0.57
PPM1A-206ENST00000531143 ABCC9O60706 1549 aa18.25■□□□□ 0.51
PPM1A-206ENST00000531143 DNAJC5BQ9UF47 199 aa18.2■□□□□ 0.5
PPM1A-206ENST00000531143 SENP3Q9H4L4 574 aaPredicted RBP17.91■□□□□ 0.46
PPM1A-206ENST00000531143 PHF23Q9BUL5 403 aaPredicted RBP17.58■□□□□ 0.41
PPM1A-206ENST00000531143 DNAJC5Q9H3Z4 198 aa17.44■□□□□ 0.38
PPM1A-206ENST00000531143 CCDC180Q9P1Z9 1646 aa17.05■□□□□ 0.32
PPM1A-206ENST00000531143 PABPN1Q86U42 306 aaKnown RBP eCLIP16.86■□□□□ 0.29
PPM1A-206ENST00000531143 RB1CC1Q8TDY2 1594 aa16.8■□□□□ 0.28
PPM1A-206ENST00000531143 CECR2Q9BXF3 1484 aa16.56■□□□□ 0.24
PPM1A-206ENST00000531143 FOXD1Q16676 465 aa16.52■□□□□ 0.24
PPM1A-206ENST00000531143 NACADO15069 1562 aa16.43■□□□□ 0.22
PPM1A-206ENST00000531143 BICRAQ9NZM4 1560 aa16.43■□□□□ 0.22
PPM1A-206ENST00000531143 CC2D2AQ9P2K1 1620 aa16.38■□□□□ 0.21
PPM1A-206ENST00000531143 UNC13AQ9UPW8 1703 aa16.35■□□□□ 0.21
PPM1A-206ENST00000531143 TRIM41Q8WV44 630 aa16.19■□□□□ 0.18
PPM1A-206ENST00000531143 DCAF8L2P0C7V8 631 aa16.18■□□□□ 0.18
PPM1A-206ENST00000531143 CUX2O14529 1486 aa16.15■□□□□ 0.18
PPM1A-206ENST00000531143 EIF4G1Q04637 1599 aaKnown RBP16.09■□□□□ 0.17
PPM1A-206ENST00000531143 PLPPR3Q6T4P5 718 aa16.07■□□□□ 0.16
PPM1A-206ENST00000531143 SHROOM4Q9ULL8 1493 aa16.04■□□□□ 0.16
PPM1A-206ENST00000531143 MYO15BQ96JP2 1530 aa15.87■□□□□ 0.13
PPM1A-206ENST00000531143 ERCC6Q03468 1493 aa15.79■□□□□ 0.12
PPM1A-206ENST00000531143 MSH5O43196 834 aa15.61■□□□□ 0.09
PPM1A-206ENST00000531143 SCRIBQ14160 1630 aa15.59■□□□□ 0.09
PPM1A-206ENST00000531143 PIAS4Q8N2W9 510 aaPredicted RBP15.53■□□□□ 0.08
PPM1A-206ENST00000531143 PPP6R1Q9UPN7 881 aa15.45■□□□□ 0.06
PPM1A-206ENST00000531143 ADRA2BP18089 450 aa15.43■□□□□ 0.06
PPM1A-206ENST00000531143 NESP48681 1621 aa15.4■□□□□ 0.06
PPM1A-206ENST00000531143 THOC2Q8NI27 1593 aaKnown RBP15.39■□□□□ 0.05
PPM1A-206ENST00000531143 DCAF1Q9Y4B6 1507 aa15.27■□□□□ 0.04
PPM1A-206ENST00000531143 NCAPD3P42695 1498 aa15.26■□□□□ 0.03
PPM1A-206ENST00000531143 OSCARQ8IYS5 282 aa15.24■□□□□ 0.03
PPM1A-206ENST00000531143 SMARCA2P51531 1590 aa15.21■□□□□ 0.03
PPM1A-206ENST00000531143 ZCCHC6Q5VYS8 1495 aaKnown RBP15.2■□□□□ 0.02
PPM1A-206ENST00000531143 BAZ1AQ9NRL2 1556 aaPredicted RBP15.17■□□□□ 0.02
PPM1A-206ENST00000531143 TRHP20396 242 aaPredicted RBP15.13■□□□□ 0.01
PPM1A-206ENST00000531143 RIMBP3CA6NJZ7 1639 aa15.13■□□□□ 0.01
PPM1A-206ENST00000531143 RIMBP3BA6NNM3 1639 aa15.13■□□□□ 0.01
PPM1A-206ENST00000531143 RIMBP3Q9UFD9 1639 aa15.13■□□□□ 0.01
PPM1A-206ENST00000531143 ILDR1Q86SU0 546 aaPredicted RBP15.12■□□□□ 0.01
PPM1A-206ENST00000531143 ATAD2BQ9ULI0 1458 aa15.06■□□□□ 0
PPM1A-206ENST00000531143 KIF21AQ7Z4S6 1674 aa15.03■□□□□ -0
PPM1A-206ENST00000531143 ARHGEF11O15085 1522 aa15.01□□□□□ -0.01
PPM1A-206ENST00000531143 HMGXB3Q12766 1538 aa15□□□□□ -0.01
PPM1A-206ENST00000531143 PDS5BQ9NTI5 1447 aa15□□□□□ -0.01
PPM1A-206ENST00000531143 LAMC3Q9Y6N6 1575 aa15□□□□□ -0.01
PPM1A-206ENST00000531143 CYB5RLQ6IPT4 315 aa14.98□□□□□ -0.01
PPM1A-206ENST00000531143 MRC2Q9UBG0 1479 aa14.95□□□□□ -0.02
PPM1A-206ENST00000531143 WDR62O43379 1518 aa14.94□□□□□ -0.02
PPM1A-206ENST00000531143 POTEDQ86YR6 584 aa14.88□□□□□ -0.03
PPM1A-206ENST00000531143 ARAP1Q96P48 1450 aa14.82□□□□□ -0.04
PPM1A-206ENST00000531143 BAZ1BQ9UIG0 1483 aaKnown RBP14.82□□□□□ -0.04
PPM1A-206ENST00000531143 CADPSQ9ULU8 1353 aa14.75□□□□□ -0.05
PPM1A-206ENST00000531143 SMARCA4P51532 1647 aa14.71□□□□□ -0.06
PPM1A-206ENST00000531143 CEP164Q9UPV0 1460 aa14.65□□□□□ -0.06
PPM1A-206ENST00000531143 PEG3Q9GZU2 1588 aa14.59□□□□□ -0.07
PPM1A-206ENST00000531143 FANCD2Q9BXW9 1451 aa14.57□□□□□ -0.08
PPM1A-206ENST00000531143 RSF1Q96T23 1441 aaPredicted RBP14.56□□□□□ -0.08
PPM1A-206ENST00000531143 ZNF608Q9ULD9 1512 aaPredicted RBP14.55□□□□□ -0.08
PPM1A-206ENST00000531143 URB2Q14146 1524 aaKnown RBP14.54□□□□□ -0.08
PPM1A-206ENST00000531143 KDM4FA0A1W2PPD8 638 aa14.46□□□□□ -0.1
PPM1A-206ENST00000531143 IFT140Q96RY7 1462 aa14.41□□□□□ -0.1
PPM1A-206ENST00000531143 SCAF1Q9H7N4 1312 aaKnown RBP14.4□□□□□ -0.1
PPM1A-206ENST00000531143 CHD1O14646 1710 aa14.37□□□□□ -0.11
PPM1A-206ENST00000531143 FBLN2P98095 1184 aa14.37□□□□□ -0.11
PPM1A-206ENST00000531143 MROH2BQ7Z745 1585 aa14.35□□□□□ -0.11
PPM1A-206ENST00000531143 CFTRP13569 1480 aa14.35□□□□□ -0.11
PPM1A-206ENST00000531143 EIF4G3O43432 1585 aaKnown RBP14.33□□□□□ -0.11
PPM1A-206ENST00000531143 FBXO41Q8TF61 875 aa14.29□□□□□ -0.12
PPM1A-206ENST00000531143 CLASP1Q7Z460 1538 aa14.28□□□□□ -0.12
PPM1A-206ENST00000531143 AQRO60306 1485 aaKnown RBP eCLIP14.28□□□□□ -0.12
PPM1A-206ENST00000531143 LMTK3Q96Q04 1460 aa14.24□□□□□ -0.13
PPM1A-206ENST00000531143 GAPVD1Q14C86 1478 aa14.23□□□□□ -0.13
PPM1A-206ENST00000531143 ERCC6L2Q5T890 1561 aa14.21□□□□□ -0.14
PPM1A-206ENST00000531143 SOCS7O14512 581 aa14.18□□□□□ -0.14
PPM1A-206ENST00000531143 HECW2Q9P2P5 1572 aa14.17□□□□□ -0.14
PPM1A-206ENST00000531143 DMRT2Q9Y5R5 561 aa14.17□□□□□ -0.14
PPM1A-206ENST00000531143 TOPBP1Q92547 1522 aa14.17□□□□□ -0.14
PPM1A-206ENST00000531143 ILDR2Q71H61 639 aa14.14□□□□□ -0.15
PPM1A-206ENST00000531143 SYNJ1O43426 1573 aa14.1□□□□□ -0.15
PPM1A-206ENST00000531143 MAPK8IP2Q13387 824 aaPredicted RBP14.1□□□□□ -0.15
PPM1A-206ENST00000531143 TARBP1Q13395 1621 aaKnown RBP14.1□□□□□ -0.15
PPM1A-206ENST00000531143 KIF13AQ9H1H9 1805 aa14.09□□□□□ -0.15
PPM1A-206ENST00000531143 SNAPC4Q5SXM2 1469 aa14.07□□□□□ -0.16
PPM1A-206ENST00000531143 CHMP7Q8WUX9 453 aaPredicted RBP14.07□□□□□ -0.16
PPM1A-206ENST00000531143 WIZO95785 1651 aa14.06□□□□□ -0.16
PPM1A-206ENST00000531143 SYNJ2O15056 1496 aa14.03□□□□□ -0.16
PPM1A-206ENST00000531143 TDRD9Q8NDG6 1382 aaKnown RBP14.03□□□□□ -0.16
PPM1A-206ENST00000531143 ADGRL1O94910 1474 aa14.03□□□□□ -0.16
PPM1A-206ENST00000531143 FAM69CQ0P6D2 419 aa14.01□□□□□ -0.17
PPM1A-206ENST00000531143 PPP4R3CPQ6ZMV5 832 aa14.01□□□□□ -0.17
PPM1A-206ENST00000531143 KDM6BO15054 1643 aa13.99□□□□□ -0.17
PPM1A-206ENST00000531143 ABCC8Q09428 1581 aa13.98□□□□□ -0.17
PPM1A-206ENST00000531143 DNMBPQ6XZF7 1577 aa13.97□□□□□ -0.17
PPM1A-206ENST00000531143 POLA1P09884 1462 aaPredicted RBP13.96□□□□□ -0.17
PPM1A-206ENST00000531143 ABCC10Q5T3U5 1492 aa13.96□□□□□ -0.17
PPM1A-206ENST00000531143 MAGI1Q96QZ7 1491 aaPredicted RBP13.96□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms