RNA–Protein interactions for RNA: ENST00000475035.5

SNRPE-205, Transcript of small nuclear ribonucleoprotein polypeptide E, humanhuman

TSL 1 (best)

Gene SNRPE, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPE-205ENST00000475035 NISCHQ9Y2I1 1504 aa21.34■■□□□ 1.01
SNRPE-205ENST00000475035 AEBP2Q6ZN18 517 aaPredicted RBP19.97■□□□□ 0.79
SNRPE-205ENST00000475035 CHIC1Q5VXU3 224 aa19.5■□□□□ 0.71
SNRPE-205ENST00000475035 CCDC180Q9P1Z9 1646 aa19.14■□□□□ 0.65
SNRPE-205ENST00000475035 ABCC9O60706 1549 aa18.87■□□□□ 0.61
SNRPE-205ENST00000475035 RB1CC1Q8TDY2 1594 aa18.11■□□□□ 0.49
SNRPE-205ENST00000475035 NACADO15069 1562 aa18.01■□□□□ 0.47
SNRPE-205ENST00000475035 DCAF8L2P0C7V8 631 aa17.9■□□□□ 0.46
SNRPE-205ENST00000475035 MYO15BQ96JP2 1530 aa17.82■□□□□ 0.44
SNRPE-205ENST00000475035 ZCCHC6Q5VYS8 1495 aaKnown RBP17.75■□□□□ 0.43
SNRPE-205ENST00000475035 UNC13AQ9UPW8 1703 aa17.69■□□□□ 0.42
SNRPE-205ENST00000475035 DCAF1Q9Y4B6 1507 aa17.67■□□□□ 0.42
SNRPE-205ENST00000475035 PABPN1Q86U42 306 aaKnown RBP eCLIP17.56■□□□□ 0.4
SNRPE-205ENST00000475035 BICRAQ9NZM4 1560 aa17.51■□□□□ 0.39
SNRPE-205ENST00000475035 SCRIBQ14160 1630 aa17.43■□□□□ 0.38
SNRPE-205ENST00000475035 DNAJC5BQ9UF47 199 aa17.42■□□□□ 0.38
SNRPE-205ENST00000475035 SHROOM4Q9ULL8 1493 aa17.37■□□□□ 0.37
SNRPE-205ENST00000475035 SENP3Q9H4L4 574 aaPredicted RBP17.11■□□□□ 0.33
SNRPE-205ENST00000475035 EIF4G1Q04637 1599 aaKnown RBP17.1■□□□□ 0.33
SNRPE-205ENST00000475035 CC2D2AQ9P2K1 1620 aa17.08■□□□□ 0.32
SNRPE-205ENST00000475035 PHF23Q9BUL5 403 aaPredicted RBP17.04■□□□□ 0.32
SNRPE-205ENST00000475035 CECR2Q9BXF3 1484 aa16.99■□□□□ 0.31
SNRPE-205ENST00000475035 SMARCA4P51532 1647 aa16.64■□□□□ 0.25
SNRPE-205ENST00000475035 BAZ1AQ9NRL2 1556 aaPredicted RBP16.6■□□□□ 0.25
SNRPE-205ENST00000475035 SMARCA2P51531 1590 aa16.59■□□□□ 0.25
SNRPE-205ENST00000475035 NCAPD3P42695 1498 aa16.58■□□□□ 0.24
SNRPE-205ENST00000475035 ATAD2BQ9ULI0 1458 aa16.57■□□□□ 0.24
SNRPE-205ENST00000475035 HMGXB3Q12766 1538 aa16.54■□□□□ 0.24
SNRPE-205ENST00000475035 PEG3Q9GZU2 1588 aa16.47■□□□□ 0.23
SNRPE-205ENST00000475035 BAZ1BQ9UIG0 1483 aaKnown RBP16.46■□□□□ 0.23
SNRPE-205ENST00000475035 MROH2BQ7Z745 1585 aa16.43■□□□□ 0.22
SNRPE-205ENST00000475035 ERCC6Q03468 1493 aa16.33■□□□□ 0.2
SNRPE-205ENST00000475035 WIZO95785 1651 aa16.27■□□□□ 0.19
SNRPE-205ENST00000475035 NESP48681 1621 aa16.25■□□□□ 0.19
SNRPE-205ENST00000475035 LAMC3Q9Y6N6 1575 aa16.23■□□□□ 0.19
SNRPE-205ENST00000475035 CUX2O14529 1486 aa16.22■□□□□ 0.19
SNRPE-205ENST00000475035 RSF1Q96T23 1441 aaPredicted RBP16.16■□□□□ 0.18
SNRPE-205ENST00000475035 KIF21AQ7Z4S6 1674 aa16.11■□□□□ 0.17
SNRPE-205ENST00000475035 PDS5BQ9NTI5 1447 aa16.11■□□□□ 0.17
SNRPE-205ENST00000475035 TOP2AP11388 1531 aaKnown RBP16.1■□□□□ 0.17
SNRPE-205ENST00000475035 THOC2Q8NI27 1593 aaKnown RBP16.1■□□□□ 0.17
SNRPE-205ENST00000475035 CADPSQ9ULU8 1353 aa16.09■□□□□ 0.17
SNRPE-205ENST00000475035 MRC2Q9UBG0 1479 aa15.97■□□□□ 0.15
SNRPE-205ENST00000475035 CFTRP13569 1480 aa15.96■□□□□ 0.14
SNRPE-205ENST00000475035 CEP164Q9UPV0 1460 aa15.96■□□□□ 0.14
SNRPE-205ENST00000475035 FANCD2Q9BXW9 1451 aa15.93■□□□□ 0.14
SNRPE-205ENST00000475035 PRDM2Q13029 1718 aa15.92■□□□□ 0.14
SNRPE-205ENST00000475035 WDR62O43379 1518 aa15.92■□□□□ 0.14
SNRPE-205ENST00000475035 DNAJC5Q9H3Z4 198 aa15.89■□□□□ 0.13
SNRPE-205ENST00000475035 CCDC88BA6NC98 1476 aa15.87■□□□□ 0.13
SNRPE-205ENST00000475035 PLPPR3Q6T4P5 718 aa15.83■□□□□ 0.12
SNRPE-205ENST00000475035 FOXD1Q16676 465 aa15.79■□□□□ 0.12
SNRPE-205ENST00000475035 URB2Q14146 1524 aaKnown RBP15.77■□□□□ 0.11
SNRPE-205ENST00000475035 ABCC8Q09428 1581 aa15.66■□□□□ 0.1
SNRPE-205ENST00000475035 TOPBP1Q92547 1522 aa15.65■□□□□ 0.1
SNRPE-205ENST00000475035 DNMBPQ6XZF7 1577 aa15.64■□□□□ 0.09
SNRPE-205ENST00000475035 IFT140Q96RY7 1462 aa15.62■□□□□ 0.09
SNRPE-205ENST00000475035 SUPT5HO00267 1087 aaKnown RBP15.59■□□□□ 0.09
SNRPE-205ENST00000475035 ZNF608Q9ULD9 1512 aaPredicted RBP15.53■□□□□ 0.08
SNRPE-205ENST00000475035 EIF4G3O43432 1585 aaKnown RBP15.52■□□□□ 0.07
SNRPE-205ENST00000475035 TARBP1Q13395 1621 aaKnown RBP15.5■□□□□ 0.07
SNRPE-205ENST00000475035 POLA1P09884 1462 aaPredicted RBP15.5■□□□□ 0.07
SNRPE-205ENST00000475035 OSCARQ8IYS5 282 aa15.46■□□□□ 0.07
SNRPE-205ENST00000475035 CUX1P39880 1505 aa15.45■□□□□ 0.06
SNRPE-205ENST00000475035 FGD5Q6ZNL6 1462 aa15.44■□□□□ 0.06
SNRPE-205ENST00000475035 SOGA1O94964 1423 aa15.42■□□□□ 0.06
SNRPE-205ENST00000475035 AQRO60306 1485 aaKnown RBP eCLIP15.41■□□□□ 0.061e-7■■■■■ 28.5
SNRPE-205ENST00000475035 RAD54L2Q9Y4B4 1467 aa15.41■□□□□ 0.06
SNRPE-205ENST00000475035 WDR97A6NE52 1622 aa15.41■□□□□ 0.06
SNRPE-205ENST00000475035 CHD1O14646 1710 aa15.37■□□□□ 0.05
SNRPE-205ENST00000475035 TDRD9Q8NDG6 1382 aaKnown RBP15.34■□□□□ 0.05
SNRPE-205ENST00000475035 TRIM41Q8WV44 630 aa15.32■□□□□ 0.04
SNRPE-205ENST00000475035 SNAPC4Q5SXM2 1469 aa15.3■□□□□ 0.04
SNRPE-205ENST00000475035 PBRM1Q86U86 1689 aa15.29■□□□□ 0.04
SNRPE-205ENST00000475035 BIVM-ERCC5R4GMW8 1640 aa15.29■□□□□ 0.04
SNRPE-205ENST00000475035 GRIN2BQ13224 1484 aa15.29■□□□□ 0.04
SNRPE-205ENST00000475035 FBLN2P98095 1184 aa15.29■□□□□ 0.04
SNRPE-205ENST00000475035 RIMBP3CA6NJZ7 1639 aa15.28■□□□□ 0.04
SNRPE-205ENST00000475035 RIMBP3BA6NNM3 1639 aa15.28■□□□□ 0.04
SNRPE-205ENST00000475035 TOP2BQ02880 1626 aa15.28■□□□□ 0.04
SNRPE-205ENST00000475035 RIMBP3Q9UFD9 1639 aa15.28■□□□□ 0.04
SNRPE-205ENST00000475035 ABCA10Q8WWZ4 1543 aa15.28■□□□□ 0.04
SNRPE-205ENST00000475035 MAGI1Q96QZ7 1491 aaPredicted RBP15.28■□□□□ 0.04
SNRPE-205ENST00000475035 WRNQ14191 1432 aaPredicted RBP eCLIP15.27■□□□□ 0.04
SNRPE-205ENST00000475035 ABCA5Q8WWZ7 1642 aa15.26■□□□□ 0.03
SNRPE-205ENST00000475035 SYNJ1O43426 1573 aa15.26■□□□□ 0.03
SNRPE-205ENST00000475035 GAPVD1Q14C86 1478 aa15.26■□□□□ 0.03
SNRPE-205ENST00000475035 ARHGEF11O15085 1522 aa15.25■□□□□ 0.03
SNRPE-205ENST00000475035 SYNJ2O15056 1496 aa15.21■□□□□ 0.03
SNRPE-205ENST00000475035 CHMP7Q8WUX9 453 aaPredicted RBP15.21■□□□□ 0.03
SNRPE-205ENST00000475035 CLASP1Q7Z460 1538 aa15.17■□□□□ 0.02
SNRPE-205ENST00000475035 ADAMTS12P58397 1594 aa15.14■□□□□ 0.01
SNRPE-205ENST00000475035 ERICH3Q5RHP9 1530 aa15.11■□□□□ 0.01
SNRPE-205ENST00000475035 GRIN2AQ12879 1464 aa15.09■□□□□ 0.01
SNRPE-205ENST00000475035 ARAP1Q96P48 1450 aa15.09■□□□□ 0.01
SNRPE-205ENST00000475035 FHAD1B1AJZ9 1412 aa15.08■□□□□ 0
SNRPE-205ENST00000475035 CYB5RLQ6IPT4 315 aa15.07■□□□□ 0
SNRPE-205ENST00000475035 ADRA2BP18089 450 aa15.04■□□□□ -0
SNRPE-205ENST00000475035 PPP6R1Q9UPN7 881 aa15.04■□□□□ -0
SNRPE-205ENST00000475035 CEP170Q5SW79 1584 aa15.02■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms