RNA–Protein interactions for RNA: ENST00000470492.5

SNRPE-204, Transcript of small nuclear ribonucleoprotein polypeptide E, humanhuman

TSL 3

Gene SNRPE, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPE-204ENST00000470492 AEBP2Q6ZN18 517 aaPredicted RBP24.51■■□□□ 1.51
SNRPE-204ENST00000470492 CHIC1Q5VXU3 224 aa23.28■■□□□ 1.32
SNRPE-204ENST00000470492 SENP3Q9H4L4 574 aaPredicted RBP20.84■□□□□ 0.93
SNRPE-204ENST00000470492 PHF23Q9BUL5 403 aaPredicted RBP20.58■□□□□ 0.89
SNRPE-204ENST00000470492 FOXD1Q16676 465 aa19.46■□□□□ 0.71
SNRPE-204ENST00000470492 PLPPR3Q6T4P5 718 aa18.58■□□□□ 0.56
SNRPE-204ENST00000470492 PPP6R1Q9UPN7 881 aa18.23■□□□□ 0.51
SNRPE-204ENST00000470492 PIAS4Q8N2W9 510 aaPredicted RBP18.16■□□□□ 0.5
SNRPE-204ENST00000470492 MSH5O43196 834 aa18.15■□□□□ 0.5
SNRPE-204ENST00000470492 ADRA2BP18089 450 aa18.15■□□□□ 0.5
SNRPE-204ENST00000470492 POTEDQ86YR6 584 aa17.7■□□□□ 0.42
SNRPE-204ENST00000470492 MAPK8IP2Q13387 824 aaPredicted RBP16.67■□□□□ 0.26
SNRPE-204ENST00000470492 DMRT2Q9Y5R5 561 aa16.56■□□□□ 0.24
SNRPE-204ENST00000470492 SCAF1Q9H7N4 1312 aaKnown RBP16.55■□□□□ 0.24
SNRPE-204ENST00000470492 PPP4R3CPQ6ZMV5 832 aa16.31■□□□□ 0.2
SNRPE-204ENST00000470492 CNKSR2Q8WXI2 1034 aa15.99■□□□□ 0.15
SNRPE-204ENST00000470492 HOXD11P31277 338 aaPredicted RBP15.97■□□□□ 0.15
SNRPE-204ENST00000470492 RNF216Q9NWF9 866 aaPredicted RBP15.84■□□□□ 0.13
SNRPE-204ENST00000470492 DCAF8L1A6NGE4 600 aa15.81■□□□□ 0.12
SNRPE-204ENST00000470492 NCBP3Q53F19 620 aaKnown RBP15.65■□□□□ 0.1
SNRPE-204ENST00000470492 CACNB1Q02641 598 aaPredicted RBP15.54■□□□□ 0.08
SNRPE-204ENST00000470492 RNF39Q9H2S5 420 aa15.52■□□□□ 0.08
SNRPE-204ENST00000470492 NPM3O75607 178 aaKnown RBP15.48■□□□□ 0.07
SNRPE-204ENST00000470492 DNAJC5BQ9UF47 199 aa15.4■□□□□ 0.06
SNRPE-204ENST00000470492 C1QBPQ07021 282 aaKnown RBP15.27■□□□□ 0.04
SNRPE-204ENST00000470492 KCNA4P22459 653 aa15.21■□□□□ 0.03
SNRPE-204ENST00000470492 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.16■□□□□ 0.02
SNRPE-204ENST00000470492 U3KPZ7 1027 aaPredicted RBP14.9□□□□□ -0.02
SNRPE-204ENST00000470492 SLC4A2P04920 1241 aa14.8□□□□□ -0.04
SNRPE-204ENST00000470492 SPINK5Q9NQ38 1064 aaPredicted RBP14.67□□□□□ -0.06
SNRPE-204ENST00000470492 CAPN15O75808 1086 aa14.6□□□□□ -0.07
SNRPE-204ENST00000470492 DSG3P32926 999 aa14.55□□□□□ -0.08
SNRPE-204ENST00000470492 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.41□□□□□ -0.1
SNRPE-204ENST00000470492 APLP2Q06481 763 aa14.41□□□□□ -0.1
SNRPE-204ENST00000470492 HNRNPUL2Q1KMD3 747 aaKnown RBP14.41□□□□□ -0.1
SNRPE-204ENST00000470492 TRHP20396 242 aaPredicted RBP14.37□□□□□ -0.11
SNRPE-204ENST00000470492 SAMD1Q6SPF0 538 aaPredicted RBP14.36□□□□□ -0.11
SNRPE-204ENST00000470492 ZNF219Q9P2Y4 722 aaPredicted RBP14.35□□□□□ -0.11
SNRPE-204ENST00000470492 SLC4A1APQ9BWU0 796 aaKnown RBP14.34□□□□□ -0.11
SNRPE-204ENST00000470492 ABCB7O75027 752 aa14.29□□□□□ -0.12
SNRPE-204ENST00000470492 MYCNP04198 464 aaPredicted RBP14.29□□□□□ -0.12
SNRPE-204ENST00000470492 FOXD4L1Q9NU39 408 aa14.17□□□□□ -0.14
SNRPE-204ENST00000470492 ZBTB22O15209 634 aa14.02□□□□□ -0.17
SNRPE-204ENST00000470492 POLA2Q14181 598 aa14.01□□□□□ -0.17
SNRPE-204ENST00000470492 ATF5Q9Y2D1 282 aaPredicted RBP14.01□□□□□ -0.17
SNRPE-204ENST00000470492 POTEHQ6S545 545 aa13.85□□□□□ -0.19
SNRPE-204ENST00000470492 RBM42Q9BTD8 480 aaKnown RBP13.83□□□□□ -0.2
SNRPE-204ENST00000470492 ATXN8OSP0DMR3 200 aa13.73□□□□□ -0.21
SNRPE-204ENST00000470492 ZBTB12Q9Y330 459 aaPredicted RBP13.7□□□□□ -0.22
SNRPE-204ENST00000470492 OSCARQ8IYS5 282 aa13.58□□□□□ -0.24
SNRPE-204ENST00000470492 AKT1S1Q96B36 256 aa13.55□□□□□ -0.24
SNRPE-204ENST00000470492 CHRDL2Q6WN34 429 aa13.54□□□□□ -0.24
SNRPE-204ENST00000470492 REM2Q8IYK8 340 aaPredicted RBP13.43□□□□□ -0.26
SNRPE-204ENST00000470492 FBLN2P98095 1184 aa13.38□□□□□ -0.27
SNRPE-204ENST00000470492 CSRNP3Q8WYN3 585 aa13.38□□□□□ -0.27
SNRPE-204ENST00000470492 MKRN4PQ13434 485 aaPredicted RBP13.36□□□□□ -0.27
SNRPE-204ENST00000470492 SPDYE2BA6NHP3 402 aa13.31□□□□□ -0.28
SNRPE-204ENST00000470492 SPDYE6P0CI01 402 aa13.31□□□□□ -0.28
SNRPE-204ENST00000470492 SPDYE2Q495Y8 402 aa13.31□□□□□ -0.28
SNRPE-204ENST00000470492 PITPNM1O00562 1244 aa13.3□□□□□ -0.28
SNRPE-204ENST00000470492 PIP4P2Q8N4L2 257 aa13.25□□□□□ -0.29
SNRPE-204ENST00000470492 FXR2P51116 673 aaKnown RBP eCLIP13.18□□□□□ -0.3
SNRPE-204ENST00000470492 EHMT2Q96KQ7 1210 aa13.17□□□□□ -0.3
SNRPE-204ENST00000470492 SSUH2Q9Y2M2 353 aa13.16□□□□□ -0.3
SNRPE-204ENST00000470492 ZNF692Q9BU19 519 aaPredicted RBP13.13□□□□□ -0.31
SNRPE-204ENST00000470492 SPDYE1Q8NFV5 336 aaPredicted RBP13.05□□□□□ -0.32
SNRPE-204ENST00000470492 SP7Q8TDD2 431 aaPredicted RBP13.01□□□□□ -0.33
SNRPE-204ENST00000470492 CLEC11AQ9Y240 323 aa13.01□□□□□ -0.33
SNRPE-204ENST00000470492 PABPN1Q86U42 306 aaKnown RBP eCLIP12.96□□□□□ -0.33
SNRPE-204ENST00000470492 HAX1O00165 279 aa12.94□□□□□ -0.34
SNRPE-204ENST00000470492 PRKAR2AP13861 404 aaKnown RBP12.93□□□□□ -0.34
SNRPE-204ENST00000470492 EVX2Q03828 476 aa12.86□□□□□ -0.35
SNRPE-204ENST00000470492 PRR29P0C7W0 189 aa12.81□□□□□ -0.36
SNRPE-204ENST00000470492 CHADLQ6NUI6 762 aa12.8□□□□□ -0.36
SNRPE-204ENST00000470492 C19orf67A6NJJ6 358 aa12.76□□□□□ -0.37
SNRPE-204ENST00000470492 SPDYE4A6NLX3 237 aa12.7□□□□□ -0.38
SNRPE-204ENST00000470492 FARP1Q9Y4F1 1045 aaPredicted RBP12.61□□□□□ -0.39
SNRPE-204ENST00000470492 STAG3Q9UJ98 1225 aa12.58□□□□□ -0.4
SNRPE-204ENST00000470492 CREBZFQ9NS37 354 aa12.55□□□□□ -0.4
SNRPE-204ENST00000470492 GABBR2O75899 941 aa12.54□□□□□ -0.4
SNRPE-204ENST00000470492 CD44P16070 742 aaKnown RBP12.52□□□□□ -0.41
SNRPE-204ENST00000470492 PROM2Q8N271 834 aa12.46□□□□□ -0.41
SNRPE-204ENST00000470492 MNX1P50219 401 aaPredicted RBP12.36□□□□□ -0.43
SNRPE-204ENST00000470492 ZNF579Q8NAF0 562 aaKnown RBP12.35□□□□□ -0.43
SNRPE-204ENST00000470492 ZRANB1Q9UGI0 708 aa12.35□□□□□ -0.43
SNRPE-204ENST00000470492 CLCN6P51797 869 aa12.32□□□□□ -0.44
SNRPE-204ENST00000470492 POTEIP0CG38 1075 aa12.31□□□□□ -0.44
SNRPE-204ENST00000470492 NPM1P06748 294 aaKnown RBP eCLIP12.26□□□□□ -0.45
SNRPE-204ENST00000470492 NISCHQ9Y2I1 1504 aa12.25□□□□□ -0.45
SNRPE-204ENST00000470492 PAK3O75914 559 aaPredicted RBP12.21□□□□□ -0.45
SNRPE-204ENST00000470492 GALR2O43603 387 aaPredicted RBP12.2□□□□□ -0.46
SNRPE-204ENST00000470492 PHF12Q96QT6 1004 aa12.2□□□□□ -0.46
SNRPE-204ENST00000470492 LHX8Q68G74 356 aa12.19□□□□□ -0.46
SNRPE-204ENST00000470492 DCBLD2Q96PD2 775 aa12.17□□□□□ -0.46
SNRPE-204ENST00000470492 FKBP8Q14318 412 aa12.09□□□□□ -0.47
SNRPE-204ENST00000470492 MIER1Q8N108 512 aa12.08□□□□□ -0.48
SNRPE-204ENST00000470492 TSPYL2Q9H2G4 693 aaPredicted RBP12.06□□□□□ -0.48
SNRPE-204ENST00000470492 MS4A3Q96HJ5 214 aa12.04□□□□□ -0.48
SNRPE-204ENST00000470492 CCDC61Q9Y6R9 512 aa12.04□□□□□ -0.48
SNRPE-204ENST00000470492 PLEKHG5O94827 1062 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms