RNA–Protein interactions for RNA: ENST00000391975.5

HDLBP-203, Transcript of high density lipoprotein binding protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDLBP, Length 6,372 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-203ENST00000391975 DCAF8L2P0C7V8 631 aa19.98■□□□□ 0.79
HDLBP-203ENST00000391975 NISCHQ9Y2I1 1504 aa19.62■□□□□ 0.73
HDLBP-203ENST00000391975 SUPT5HO00267 1087 aaKnown RBP19.16■□□□□ 0.66
HDLBP-203ENST00000391975 SHROOM4Q9ULL8 1493 aa18.85■□□□□ 0.61
HDLBP-203ENST00000391975 PELP1Q8IZL8 1130 aaKnown RBP18.74■□□□□ 0.59
HDLBP-203ENST00000391975 PCGF6Q9BYE7 350 aa18.53■□□□□ 0.56
HDLBP-203ENST00000391975 EHMT2Q96KQ7 1210 aa18.25■□□□□ 0.51
HDLBP-203ENST00000391975 HRCP23327 699 aa18.12■□□□□ 0.49
HDLBP-203ENST00000391975 ERICH6Q7L0X2 663 aa18.12■□□□□ 0.49
HDLBP-203ENST00000391975 FAM9AQ8IZU1 332 aaPredicted RBP17.97■□□□□ 0.47
HDLBP-203ENST00000391975 ZEB1P37275 1124 aaPredicted RBP17.92■□□□□ 0.46
HDLBP-203ENST00000391975 CCER1Q8TC90 406 aaPredicted RBP17.87■□□□□ 0.45
HDLBP-203ENST00000391975 PPARGC1BQ86YN6 1023 aaKnown RBP17.84■□□□□ 0.45
HDLBP-203ENST00000391975 MYT1Q01538 1121 aa17.79■□□□□ 0.44
HDLBP-203ENST00000391975 CENPBP07199 599 aaPredicted RBP17.78■□□□□ 0.44
HDLBP-203ENST00000391975 TTBK1Q5TCY1 1321 aaPredicted RBP17.73■□□□□ 0.43
HDLBP-203ENST00000391975 CHIC1Q5VXU3 224 aa17.72■□□□□ 0.43
HDLBP-203ENST00000391975 TRIM26Q12899 539 aaPredicted RBP17.69■□□□□ 0.42
HDLBP-203ENST00000391975 TRIM41Q8WV44 630 aa17.65■□□□□ 0.42
HDLBP-203ENST00000391975 LOC105371045A0A1W2PR82 267 aa17.62■□□□□ 0.41
HDLBP-203ENST00000391975 APLP2Q06481 763 aa17.48■□□□□ 0.39
HDLBP-203ENST00000391975 YTHDC1Q96MU7 727 aaKnown RBP17.47■□□□□ 0.39
HDLBP-203ENST00000391975 RANGAP1P46060 587 aaPredicted RBP17.29■□□□□ 0.36
HDLBP-203ENST00000391975 NEFLP07196 543 aa17.24■□□□□ 0.35
HDLBP-203ENST00000391975 ATP1B4Q9UN42 357 aaPredicted RBP17.19■□□□□ 0.34
HDLBP-203ENST00000391975 UBTFP17480 764 aaKnown RBP17.18■□□□□ 0.34
HDLBP-203ENST00000391975 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.15■□□□□ 0.34
HDLBP-203ENST00000391975 DIEXFQ68CQ4 756 aaKnown RBP17.11■□□□□ 0.33
HDLBP-203ENST00000391975 DAXXQ9UER7 740 aaPredicted RBP17.07■□□□□ 0.32
HDLBP-203ENST00000391975 GTF3C3Q9Y5Q9 886 aa17.07■□□□□ 0.32
HDLBP-203ENST00000391975 ACIN1Q9UKV3 1341 aaKnown RBP16.95■□□□□ 0.3
HDLBP-203ENST00000391975 HNRNPUL2Q1KMD3 747 aaKnown RBP16.92■□□□□ 0.3
HDLBP-203ENST00000391975 MYT1LQ9UL68 1186 aa16.91■□□□□ 0.3
HDLBP-203ENST00000391975 SCAF1Q9H7N4 1312 aaKnown RBP16.84■□□□□ 0.29
HDLBP-203ENST00000391975 DCAF1Q9Y4B6 1507 aa16.79■□□□□ 0.28
HDLBP-203ENST00000391975 MYO15BQ96JP2 1530 aa16.73■□□□□ 0.27
HDLBP-203ENST00000391975 ABCC9O60706 1549 aa16.73■□□□□ 0.27
HDLBP-203ENST00000391975 NEUROD1Q13562 356 aa16.72■□□□□ 0.27
HDLBP-203ENST00000391975 PABPN1Q86U42 306 aaKnown RBP eCLIP16.69■□□□□ 0.265e-8■■□□□ 12.5
HDLBP-203ENST00000391975 ZNF316A6NFI3 1004 aaPredicted RBP16.69■□□□□ 0.26
HDLBP-203ENST00000391975 RTL5Q5HYW3 569 aaPredicted RBP16.69■□□□□ 0.26
HDLBP-203ENST00000391975 ITGAEP38570 1179 aa16.69■□□□□ 0.26
HDLBP-203ENST00000391975 BCANQ96GW7 911 aa16.57■□□□□ 0.24
HDLBP-203ENST00000391975 ZCCHC6Q5VYS8 1495 aaKnown RBP16.42■□□□□ 0.22
HDLBP-203ENST00000391975 FBLN2P98095 1184 aa16.4■□□□□ 0.22
HDLBP-203ENST00000391975 CLSPNQ9HAW4 1339 aa16.39■□□□□ 0.21
HDLBP-203ENST00000391975 POLR3GLQ9BT43 218 aa16.37■□□□□ 0.21
HDLBP-203ENST00000391975 MIER1Q8N108 512 aa16.32■□□□□ 0.2
HDLBP-203ENST00000391975 CNGB1Q14028 1251 aaPredicted RBP16.3■□□□□ 0.2
HDLBP-203ENST00000391975 CSRNP3Q8WYN3 585 aa16.29■□□□□ 0.2
HDLBP-203ENST00000391975 CCDC180Q9P1Z9 1646 aa16.24■□□□□ 0.19
HDLBP-203ENST00000391975 ANP32CO43423 234 aa16.21■□□□□ 0.19
HDLBP-203ENST00000391975 FAM50AQ14320 339 aaKnown RBP16.21■□□□□ 0.19
HDLBP-203ENST00000391975 CDK11AQ9UQ88 783 aaPredicted RBP16.21■□□□□ 0.18
HDLBP-203ENST00000391975 FKBP8Q14318 412 aa16.2■□□□□ 0.18
HDLBP-203ENST00000391975 PLPPR3Q6T4P5 718 aa16.12■□□□□ 0.17
HDLBP-203ENST00000391975 SLC4A1APQ9BWU0 796 aaKnown RBP16.11■□□□□ 0.17
HDLBP-203ENST00000391975 EIF5BO60841 1220 aaKnown RBP16.08■□□□□ 0.16
HDLBP-203ENST00000391975 GLIPR1L2Q4G1C9 344 aa16.07■□□□□ 0.16
HDLBP-203ENST00000391975 DDX10Q13206 875 aaKnown RBP16.05■□□□□ 0.16
HDLBP-203ENST00000391975 TRIM52Q96A61 297 aa16■□□□□ 0.15
HDLBP-203ENST00000391975 ANP32EQ9BTT0 268 aa16■□□□□ 0.15
HDLBP-203ENST00000391975 ZBTB47Q9UFB7 747 aaPredicted RBP15.99■□□□□ 0.15
HDLBP-203ENST00000391975 RSF1Q96T23 1441 aaPredicted RBP15.97■□□□□ 0.15
HDLBP-203ENST00000391975 HNRNPUQ00839 825 aaKnown RBP eCLIP15.93■□□□□ 0.141e-6■□□□□ 8.9
HDLBP-203ENST00000391975 ARID3CA6NKF2 412 aa15.91■□□□□ 0.14
HDLBP-203ENST00000391975 SCRIBQ14160 1630 aa15.91■□□□□ 0.14
HDLBP-203ENST00000391975 CEP162Q5TB80 1403 aa15.91■□□□□ 0.14
HDLBP-203ENST00000391975 SUPT16HQ9Y5B9 1047 aaKnown RBP15.9■□□□□ 0.14
HDLBP-203ENST00000391975 ANP32BQ92688 251 aaKnown RBP15.88■□□□□ 0.13
HDLBP-203ENST00000391975 ANP32AP39687 249 aaKnown RBP15.87■□□□□ 0.13
HDLBP-203ENST00000391975 P3H3Q8IVL6 736 aa15.84■□□□□ 0.13
HDLBP-203ENST00000391975 IRX6P78412 446 aaPredicted RBP15.84■□□□□ 0.13
HDLBP-203ENST00000391975 HIRIP3Q9BW71 556 aaPredicted RBP15.84■□□□□ 0.13
HDLBP-203ENST00000391975 ZNF326Q5BKZ1 582 aaKnown RBP15.83■□□□□ 0.12
HDLBP-203ENST00000391975 CLIP1P30622 1438 aa15.81■□□□□ 0.12
HDLBP-203ENST00000391975 ESF1Q9H501 851 aaKnown RBP15.81■□□□□ 0.12
HDLBP-203ENST00000391975 NPM2Q86SE8 214 aaKnown RBP15.8■□□□□ 0.12
HDLBP-203ENST00000391975 NBR1Q14596 966 aa15.79■□□□□ 0.12
HDLBP-203ENST00000391975 TONSLQ96HA7 1378 aa15.79■□□□□ 0.12
HDLBP-203ENST00000391975 BCL11AQ9H165 835 aa15.78■□□□□ 0.12
HDLBP-203ENST00000391975 FAM9BQ8IZU0 186 aa15.77■□□□□ 0.12
HDLBP-203ENST00000391975 NPM1P06748 294 aaKnown RBP eCLIP15.77■□□□□ 0.12
HDLBP-203ENST00000391975 TNIKQ9UKE5 1360 aa15.76■□□□□ 0.11
HDLBP-203ENST00000391975 CANXP27824 592 aaKnown RBP15.75■□□□□ 0.11
HDLBP-203ENST00000391975 GOLGA3Q08378 1498 aa15.68■□□□□ 0.1
HDLBP-203ENST00000391975 EEA1Q15075 1411 aa15.67■□□□□ 0.1
HDLBP-203ENST00000391975 TSHZ2Q9NRE2 1034 aa15.67■□□□□ 0.1
HDLBP-203ENST00000391975 SLC24A1O60721 1099 aa15.67■□□□□ 0.1
HDLBP-203ENST00000391975 CCDC136Q96JN2 1154 aa15.67■□□□□ 0.1
HDLBP-203ENST00000391975 MRS2Q9HD23 443 aa15.64■□□□□ 0.09
HDLBP-203ENST00000391975 ZNF777Q9ULD5 760 aaPredicted RBP15.63■□□□□ 0.09
HDLBP-203ENST00000391975 RBM19Q9Y4C8 960 aaKnown RBP15.62■□□□□ 0.09
HDLBP-203ENST00000391975 HSP90AA1P07900 732 aaKnown RBP15.6■□□□□ 0.09
HDLBP-203ENST00000391975 RB1CC1Q8TDY2 1594 aa15.59■□□□□ 0.09
HDLBP-203ENST00000391975 STAG3Q9UJ98 1225 aa15.58■□□□□ 0.08
HDLBP-203ENST00000391975 SIN3AQ96ST3 1273 aa15.57■□□□□ 0.08
HDLBP-203ENST00000391975 SOGA1O94964 1423 aa15.56■□□□□ 0.08
HDLBP-203ENST00000391975 SALL2Q9Y467 1007 aaPredicted RBP15.56■□□□□ 0.08
HDLBP-203ENST00000391975 TRHP20396 242 aaPredicted RBP15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms