RNA–Protein interactions for RNA: ENST00000325658.3

PPM1A-202, Transcript of protein phosphatase, Mg2+/Mn2+ dependent 1A, humanhuman

TSL 1 (best) BASIC

Gene PPM1A, Length 4,125 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPM1A-202ENST00000325658 DCAF8L2P0C7V8 631 aa19.18■□□□□ 0.66
PPM1A-202ENST00000325658 NISCHQ9Y2I1 1504 aa19.11■□□□□ 0.65
PPM1A-202ENST00000325658 SUPT5HO00267 1087 aaKnown RBP18.42■□□□□ 0.54
PPM1A-202ENST00000325658 SHROOM4Q9ULL8 1493 aa18.37■□□□□ 0.53
PPM1A-202ENST00000325658 EHMT2Q96KQ7 1210 aa17.91■□□□□ 0.46
PPM1A-202ENST00000325658 PPARGC1BQ86YN6 1023 aaKnown RBP17.74■□□□□ 0.43
PPM1A-202ENST00000325658 PELP1Q8IZL8 1130 aaKnown RBP17.66■□□□□ 0.42
PPM1A-202ENST00000325658 HRCP23327 699 aa17.63■□□□□ 0.41
PPM1A-202ENST00000325658 PCGF6Q9BYE7 350 aa17.62■□□□□ 0.41
PPM1A-202ENST00000325658 MYT1Q01538 1121 aa17.39■□□□□ 0.37
PPM1A-202ENST00000325658 FAM9AQ8IZU1 332 aaPredicted RBP17.39■□□□□ 0.37
PPM1A-202ENST00000325658 MYO15BQ96JP2 1530 aa17.22■□□□□ 0.35
PPM1A-202ENST00000325658 TTBK1Q5TCY1 1321 aaPredicted RBP17.19■□□□□ 0.34
PPM1A-202ENST00000325658 CHIC1Q5VXU3 224 aa17.14■□□□□ 0.33
PPM1A-202ENST00000325658 LOC105371045A0A1W2PR82 267 aa17.09■□□□□ 0.33
PPM1A-202ENST00000325658 RANGAP1P46060 587 aaPredicted RBP16.94■□□□□ 0.3
PPM1A-202ENST00000325658 SCAF1Q9H7N4 1312 aaKnown RBP16.88■□□□□ 0.29
PPM1A-202ENST00000325658 TRIM41Q8WV44 630 aa16.8■□□□□ 0.28
PPM1A-202ENST00000325658 CENPBP07199 599 aaPredicted RBP16.69■□□□□ 0.26
PPM1A-202ENST00000325658 TRIM26Q12899 539 aaPredicted RBP16.67■□□□□ 0.26
PPM1A-202ENST00000325658 APLP2Q06481 763 aa16.5■□□□□ 0.23
PPM1A-202ENST00000325658 UBTFP17480 764 aaKnown RBP16.49■□□□□ 0.23
PPM1A-202ENST00000325658 NEUROD1Q13562 356 aa16.45■□□□□ 0.22
PPM1A-202ENST00000325658 DCAF1Q9Y4B6 1507 aa16.44■□□□□ 0.22
PPM1A-202ENST00000325658 ERICH6Q7L0X2 663 aa16.43■□□□□ 0.22
PPM1A-202ENST00000325658 ATP1B4Q9UN42 357 aaPredicted RBP16.4■□□□□ 0.22
PPM1A-202ENST00000325658 CCER1Q8TC90 406 aaPredicted RBP16.38■□□□□ 0.21
PPM1A-202ENST00000325658 GTF3C3Q9Y5Q9 886 aa16.38■□□□□ 0.21
PPM1A-202ENST00000325658 YTHDC1Q96MU7 727 aaKnown RBP16.35■□□□□ 0.21
PPM1A-202ENST00000325658 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.34■□□□□ 0.21
PPM1A-202ENST00000325658 ZEB1P37275 1124 aaPredicted RBP16.33■□□□□ 0.21
PPM1A-202ENST00000325658 ACIN1Q9UKV3 1341 aaKnown RBP16.31■□□□□ 0.2
PPM1A-202ENST00000325658 PABPN1Q86U42 306 aaKnown RBP eCLIP16.3■□□□□ 0.2
PPM1A-202ENST00000325658 ABCC9O60706 1549 aa16.27■□□□□ 0.19
PPM1A-202ENST00000325658 ZCCHC6Q5VYS8 1495 aaKnown RBP16.18■□□□□ 0.18
PPM1A-202ENST00000325658 CCDC180Q9P1Z9 1646 aa16.17■□□□□ 0.18
PPM1A-202ENST00000325658 ITGAEP38570 1179 aa16.13■□□□□ 0.17
PPM1A-202ENST00000325658 DIEXFQ68CQ4 756 aaKnown RBP16.13■□□□□ 0.17
PPM1A-202ENST00000325658 HNRNPUL2Q1KMD3 747 aaKnown RBP16.08■□□□□ 0.16
PPM1A-202ENST00000325658 NEFLP07196 543 aa15.86■□□□□ 0.13
PPM1A-202ENST00000325658 CNGB1Q14028 1251 aaPredicted RBP15.8■□□□□ 0.12
PPM1A-202ENST00000325658 MIER1Q8N108 512 aa15.8■□□□□ 0.12
PPM1A-202ENST00000325658 ZNF316A6NFI3 1004 aaPredicted RBP15.69■□□□□ 0.1
PPM1A-202ENST00000325658 P3H3Q8IVL6 736 aa15.62■□□□□ 0.09
PPM1A-202ENST00000325658 POLR3GLQ9BT43 218 aa15.62■□□□□ 0.09
PPM1A-202ENST00000325658 SCRIBQ14160 1630 aa15.6■□□□□ 0.09
PPM1A-202ENST00000325658 ARID3CA6NKF2 412 aa15.58■□□□□ 0.08
PPM1A-202ENST00000325658 RSF1Q96T23 1441 aaPredicted RBP15.58■□□□□ 0.08
PPM1A-202ENST00000325658 FAM50AQ14320 339 aaKnown RBP15.55■□□□□ 0.08
PPM1A-202ENST00000325658 RB1CC1Q8TDY2 1594 aa15.54■□□□□ 0.08
PPM1A-202ENST00000325658 BCANQ96GW7 911 aa15.53■□□□□ 0.08
PPM1A-202ENST00000325658 BCL11AQ9H165 835 aa15.53■□□□□ 0.08
PPM1A-202ENST00000325658 CSRNP3Q8WYN3 585 aa15.51■□□□□ 0.07
PPM1A-202ENST00000325658 RTL5Q5HYW3 569 aaPredicted RBP15.5■□□□□ 0.07
PPM1A-202ENST00000325658 EIF5BO60841 1220 aaKnown RBP15.46■□□□□ 0.07
PPM1A-202ENST00000325658 SUPT16HQ9Y5B9 1047 aaKnown RBP15.45■□□□□ 0.06
PPM1A-202ENST00000325658 MYT1LQ9UL68 1186 aa15.41■□□□□ 0.06
PPM1A-202ENST00000325658 FBLN2P98095 1184 aa15.4■□□□□ 0.06
PPM1A-202ENST00000325658 TSHZ2Q9NRE2 1034 aa15.39■□□□□ 0.05
PPM1A-202ENST00000325658 KCNH8Q96L42 1107 aa15.35■□□□□ 0.05
PPM1A-202ENST00000325658 ANP32EQ9BTT0 268 aa15.34■□□□□ 0.05
PPM1A-202ENST00000325658 TRIM52Q96A61 297 aa15.31■□□□□ 0.04
PPM1A-202ENST00000325658 CECR2Q9BXF3 1484 aa15.28■□□□□ 0.04
PPM1A-202ENST00000325658 CEP162Q5TB80 1403 aa15.26■□□□□ 0.03
PPM1A-202ENST00000325658 DAXXQ9UER7 740 aaPredicted RBP15.26■□□□□ 0.03
PPM1A-202ENST00000325658 ZNF326Q5BKZ1 582 aaKnown RBP15.26■□□□□ 0.03
PPM1A-202ENST00000325658 SOGA1O94964 1423 aa15.21■□□□□ 0.03
PPM1A-202ENST00000325658 FKBP8Q14318 412 aa15.18■□□□□ 0.02
PPM1A-202ENST00000325658 CCDC88BA6NC98 1476 aa15.17■□□□□ 0.02
PPM1A-202ENST00000325658 HIRIP3Q9BW71 556 aaPredicted RBP15.16■□□□□ 0.02
PPM1A-202ENST00000325658 ABCC8Q09428 1581 aa15.16■□□□□ 0.02
PPM1A-202ENST00000325658 RUSC2Q8N2Y8 1516 aa15.15■□□□□ 0.02
PPM1A-202ENST00000325658 CDK11AQ9UQ88 783 aaPredicted RBP15.13■□□□□ 0.01
PPM1A-202ENST00000325658 MROH2BQ7Z745 1585 aa15.13■□□□□ 0.01
PPM1A-202ENST00000325658 ZNF777Q9ULD5 760 aaPredicted RBP15.12■□□□□ 0.01
PPM1A-202ENST00000325658 CHIC2Q9UKJ5 165 aa15.09■□□□□ 0.01
PPM1A-202ENST00000325658 SLC4A1APQ9BWU0 796 aaKnown RBP15.07■□□□□ 0
PPM1A-202ENST00000325658 WIZO95785 1651 aa15.06■□□□□ 0
PPM1A-202ENST00000325658 RBM19Q9Y4C8 960 aaKnown RBP15.05■□□□□ 0
PPM1A-202ENST00000325658 WRNQ14191 1432 aaPredicted RBP eCLIP15.05■□□□□ -0
PPM1A-202ENST00000325658 NBR1Q14596 966 aa15.05■□□□□ -0
PPM1A-202ENST00000325658 GLIPR1L2Q4G1C9 344 aa15.04■□□□□ -0
PPM1A-202ENST00000325658 DDX10Q13206 875 aaKnown RBP15.01□□□□□ -0.01
PPM1A-202ENST00000325658 IRX6P78412 446 aaPredicted RBP15.01□□□□□ -0.01
PPM1A-202ENST00000325658 TNIKQ9UKE5 1360 aa15.01□□□□□ -0.01
PPM1A-202ENST00000325658 SENP3-EIF4A1A0A087X0R7 540 aa14.98□□□□□ -0.01
PPM1A-202ENST00000325658 MSH5O43196 834 aa14.97□□□□□ -0.01
PPM1A-202ENST00000325658 RTN4Q9NQC3 1192 aaKnown RBP14.94□□□□□ -0.02
PPM1A-202ENST00000325658 CLIP1P30622 1438 aa14.91□□□□□ -0.02
PPM1A-202ENST00000325658 ANP32CO43423 234 aa14.91□□□□□ -0.02
PPM1A-202ENST00000325658 PRKCSHP14314 528 aaPredicted RBP14.9□□□□□ -0.02
PPM1A-202ENST00000325658 KANK4Q5T7N3 995 aaPredicted RBP14.89□□□□□ -0.03
PPM1A-202ENST00000325658 DHX57Q6P158 1386 aaKnown RBP14.88□□□□□ -0.03
PPM1A-202ENST00000325658 CLSPNQ9HAW4 1339 aa14.88□□□□□ -0.03
PPM1A-202ENST00000325658 SENP3Q9H4L4 574 aaPredicted RBP14.88□□□□□ -0.03
PPM1A-202ENST00000325658 ANP32AP39687 249 aaKnown RBP14.86□□□□□ -0.03
PPM1A-202ENST00000325658 RRP7BPQ9NSQ0 103 aa14.86□□□□□ -0.03
PPM1A-202ENST00000325658 SALL2Q9Y467 1007 aaPredicted RBP14.85□□□□□ -0.03
PPM1A-202ENST00000325658 SIN3AQ96ST3 1273 aa14.84□□□□□ -0.03
PPM1A-202ENST00000325658 NPM2Q86SE8 214 aaKnown RBP14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms