Protein–RNA interactions for Protein: P83369

LSM11, U7 snRNA-associated Sm-like protein LSm11, humanhuman

Known RBP eCLIP

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM11P83369 LRRC8B-206ENST00000640258 8034 ntAPPRIS P1 TSL 5 BASIC7.71□□□□□ -1.181e-6■■■■■ 28.9
LSM11P83369 LRIG2-201ENST00000361127 11555 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.221e-6■■■■■ 28.9
LSM11P83369 ATG16L1-209ENST00000431917 589 ntTSL 57.39□□□□□ -1.231e-6■■■■■ 28.9
LSM11P83369 AC106886.5-201ENST00000380361 11692 ntAPPRIS P1 TSL 2 BASIC7.06□□□□□ -1.281e-6■■■■■ 28.9
LSM11P83369 SRCAP-201ENST00000262518 11754 ntAPPRIS P1 TSL 2 BASIC6.95□□□□□ -1.31e-6■■■■■ 28.9
LSM11P83369 B2M-203ENST00000557901 407 ntTSL 1 (best)6.94□□□□□ -1.31e-6■■■■■ 28.9
LSM11P83369 LRRC8B-203ENST00000439853 7474 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.341e-6■■■■■ 28.9
LSM11P83369 LRIG2-203ENST00000466161 3366 ntTSL 26.51□□□□□ -1.371e-6■■■■■ 28.9
LSM11P83369 LRIG2-205ENST00000492207 5076 ntTSL 56.43□□□□□ -1.381e-6■■■■■ 28.9
LSM11P83369 LRBA-207ENST00000509835 5578 ntTSL 1 (best)5.86□□□□□ -1.471e-6■■■■■ 28.9
LSM11P83369 LRBA-203ENST00000503716 3712 ntTSL 1 (best)5.83□□□□□ -1.481e-6■■■■■ 28.9
LSM11P83369 LRRC8B-205ENST00000639264 7736 ntAPPRIS P1 TSL 55.61□□□□□ -1.511e-6■■■■■ 28.9
LSM11P83369 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.561e-6■■■■■ 28.9
LSM11P83369 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.591e-23■■■■■ 28.9
LSM11P83369 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.21□□□□□ -2.061e-23■■■■■ 28.9
LSM11P83369 LINC01088-207ENST00000511241 679 ntTSL 214.17□□□□□ -0.144e-6■■■■■ 28.9
LSM11P83369 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC14.13□□□□□ -0.154e-6■■■■■ 28.9
LSM11P83369 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC13.78□□□□□ -0.24e-6■■■■■ 28.9
LSM11P83369 LINC01088-210ENST00000513153 695 ntTSL 312.93□□□□□ -0.344e-6■■■■■ 28.9
LSM11P83369 LINC01088-211ENST00000515597 664 ntTSL 1 (best)12.02□□□□□ -0.494e-6■■■■■ 28.9
LSM11P83369 LINC01088-206ENST00000510667 534 ntTSL 311.73□□□□□ -0.534e-6■■■■■ 28.9
LSM11P83369 LINC01088-209ENST00000512130 525 ntTSL 310.75□□□□□ -0.694e-6■■■■■ 28.9
LSM11P83369 MIR17HG-202ENST00000581816 2032 ntTSL 1 (best) BASIC7.47□□□□□ -1.215e-13■■■■■ 28.7
LSM11P83369 ZC3H3-202ENST00000528401 546 ntTSL 315.47■□□□□ 0.071e-6■■■■■ 28.7
LSM11P83369 EDEM3-201ENST00000318130 6898 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.476e-7■■■■■ 28.7
LSM11P83369 EDEM3-202ENST00000367512 6678 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.486e-7■■■■■ 28.7
LSM11P83369 EDEM3-203ENST00000439962 2872 ntTSL 1 (best)4.26□□□□□ -1.736e-7■■■■■ 28.7
LSM11P83369 ADARB1-208ENST00000462214 587 ntTSL 39.7□□□□□ -0.862e-7■■■■■ 28.6
LSM11P83369 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC16.8■□□□□ 0.282e-6■■■■■ 28.5
LSM11P83369 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC14.62□□□□□ -0.072e-6■■■■■ 28.5
LSM11P83369 PHKG2-207ENST00000564838 1618 ntTSL 213.76□□□□□ -0.212e-6■■■■■ 28.5
LSM11P83369 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.242e-6■■■■■ 28.5
LSM11P83369 PHKG2-206ENST00000563913 1791 ntTSL 513□□□□□ -0.332e-6■■■■■ 28.5
LSM11P83369 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.575e-9■■■■■ 28.5
LSM11P83369 PDXDC2P-NPIPB14P-204ENST00000530079 2764 ntTSL 512.31□□□□□ -0.445e-9■■■■■ 28.5
LSM11P83369 PDXDC2P-NPIPB14P-205ENST00000531894 4184 ntTSL 1 (best) BASIC11.27□□□□□ -0.615e-9■■■■■ 28.5
LSM11P83369 NPIPB14P-203ENST00000532298 987 ntBASIC9.43□□□□□ -0.95e-9■■■■■ 28.5
LSM11P83369 PARP2-210ENST00000539930 635 ntTSL 39.16□□□□□ -0.945e-9■■■■■ 28.5
LSM11P83369 PARP2-204ENST00000527915 1980 ntTSL 2 BASIC7.58□□□□□ -1.25e-9■■■■■ 28.5
LSM11P83369 PARP2-201ENST00000250416 1886 ntAPPRIS P3 TSL 1 (best) BASIC7.13□□□□□ -1.275e-9■■■■■ 28.5
LSM11P83369 ESRRA-206ENST00000539594 747 ntTSL 324.45■■□□□ 1.56e-8■■■■■ 28.5
LSM11P83369 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC23.23■■□□□ 1.316e-8■■■■■ 28.5
LSM11P83369 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.076e-8■■■■■ 28.5
LSM11P83369 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.956e-8■■■■■ 28.5
LSM11P83369 UBE2S-202ENST00000587845 743 ntTSL 220.45■□□□□ 0.866e-8■■■■■ 28.5
LSM11P83369 RPL35-203ENST00000487431 785 ntTSL 1 (best)18.63■□□□□ 0.576e-8■■■■■ 28.5
LSM11P83369 ESRRA-205ENST00000468670 742 ntTSL 217.66■□□□□ 0.426e-8■■■■■ 28.5
LSM11P83369 PIGQ-216ENST00000634341 1046 nt17.17■□□□□ 0.346e-8■■■■■ 28.5
LSM11P83369 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC16.81■□□□□ 0.286e-8■■■■■ 28.5
LSM11P83369 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC16.04■□□□□ 0.161e-9■■■■■ 28.5
LSM11P83369 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.061e-9■■■■■ 28.5
LSM11P83369 NCAPH2-209ENST00000522304 521 ntTSL 314.53□□□□□ -0.081e-9■■■■■ 28.5
LSM11P83369 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.16e-8■■■■■ 28.5
LSM11P83369 PIGQ-217ENST00000635205 936 ntTSL 514.06□□□□□ -0.166e-8■■■■■ 28.5
LSM11P83369 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.211e-9■■■■■ 28.5
LSM11P83369 NPM1-204ENST00000517671 1338 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.256e-8■■■■■ 28.5
LSM11P83369 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC13.06□□□□□ -0.326e-8■■■■■ 28.5
LSM11P83369 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.336e-8■■■■■ 28.5
LSM11P83369 RPL35-204ENST00000493018 692 ntTSL 312.18□□□□□ -0.466e-8■■■■■ 28.5
LSM11P83369 PLXNA1-201ENST00000393409 9066 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.566e-8■■■■■ 28.5
LSM11P83369 TAOK2-201ENST00000279394 4246 ntAPPRIS ALT1 TSL 1 (best) BASIC11.33□□□□□ -0.62e-8■■■■■ 28.5
LSM11P83369 SND1-209ENST00000470723 568 ntTSL 411.27□□□□□ -0.616e-8■■■■■ 28.5
LSM11P83369 RNF166-206ENST00000564894 574 ntTSL 411.03□□□□□ -0.646e-8■■■■■ 28.5
LSM11P83369 NPM1-205ENST00000518587 670 ntTSL 210.16□□□□□ -0.786e-8■■■■■ 28.5
LSM11P83369 SND1-201ENST00000354725 3476 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.836e-8■■■■■ 28.5
LSM11P83369 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC9.66□□□□□ -0.866e-8■■■■■ 28.5
LSM11P83369 SND1-213ENST00000486037 695 ntTSL 38.7□□□□□ -1.026e-8■■■■■ 28.5
LSM11P83369 SND1-211ENST00000484767 460 ntTSL 48.54□□□□□ -1.046e-8■■■■■ 28.5
LSM11P83369 RPL35-202ENST00000373570 493 ntTSL 3 BASIC8.24□□□□□ -1.096e-8■■■■■ 28.5
LSM11P83369 NPM1-208ENST00000521672 597 ntTSL 57.35□□□□□ -1.236e-8■■■■■ 28.5
LSM11P83369 NPM1-210ENST00000523339 268 ntTSL 26.63□□□□□ -1.356e-8■■■■■ 28.5
LSM11P83369 NPM1-211ENST00000523622 247 ntTSL 35.9□□□□□ -1.466e-8■■■■■ 28.5
LSM11P83369 MYH10-202ENST00000360416 7762 ntTSL 1 (best) BASIC9.61□□□□□ -0.874e-6■■■■■ 28.4
LSM11P83369 MYH10-201ENST00000269243 7662 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.974e-6■■■■■ 28.4
LSM11P83369 MYH10-203ENST00000379980 7694 ntTSL 1 (best) BASIC8.96□□□□□ -0.974e-6■■■■■ 28.4
LSM11P83369 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.111e-17■■■■■ 28.3
LSM11P83369 KLHDC8B-205ENST00000476495 853 ntTSL 214.55□□□□□ -0.081e-17■■■■■ 28.3
LSM11P83369 KLHDC8B-202ENST00000459846 726 ntTSL 311.85□□□□□ -0.511e-17■■■■■ 28.3
LSM11P83369 PTMA-212ENST00000481928 1635 ntTSL 315.09■□□□□ 0.014e-17■■■■■ 28.3
LSM11P83369 PTMA-208ENST00000448874 1108 ntTSL 214.47□□□□□ -0.094e-17■■■■■ 28.3
LSM11P83369 PTMA-204ENST00000409683 933 ntAPPRIS ALT1 TSL 3 BASIC14.37□□□□□ -0.114e-17■■■■■ 28.3
LSM11P83369 PTMA-209ENST00000466801 784 ntTSL 513.49□□□□□ -0.254e-17■■■■■ 28.3
LSM11P83369 PTMA-202ENST00000409115 1221 ntAPPRIS ALT1 TSL 1 (best) BASIC13.47□□□□□ -0.254e-17■■■■■ 28.3
LSM11P83369 PTMA-201ENST00000341369 1212 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.374e-17■■■■■ 28.3
LSM11P83369 PTMA-211ENST00000468027 621 ntTSL 1 (best)11.38□□□□□ -0.594e-17■■■■■ 28.3
LSM11P83369 PTMA-203ENST00000409321 735 ntTSL 3 BASIC9.61□□□□□ -0.874e-17■■■■■ 28.3
LSM11P83369 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC21.49■■□□□ 1.033e-6■■■■■ 28.2
LSM11P83369 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.713e-6■■■■■ 28.2
LSM11P83369 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.573e-6■■■■■ 28.2
LSM11P83369 GNB1-204ENST00000439272 602 ntTSL 510□□□□□ -0.813e-6■■■■■ 28.2
LSM11P83369 GCOM1-204ENST00000463717 1694 ntTSL 218.79■□□□□ 0.65e-6■■■■■ 28.2
LSM11P83369 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC17.89■□□□□ 0.455e-6■■■■■ 28.2
LSM11P83369 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.45e-6■■■■■ 28.2
LSM11P83369 GCOM1-211ENST00000496101 2032 ntTSL 1 (best)17.1■□□□□ 0.335e-6■■■■■ 28.2
LSM11P83369 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.35e-6■■■■■ 28.2
LSM11P83369 GCOM1-208ENST00000482814 1620 ntTSL 216.52■□□□□ 0.245e-6■■■■■ 28.2
LSM11P83369 GCOM1-210ENST00000488175 2601 ntTSL 1 (best)15.57■□□□□ 0.085e-6■■■■■ 28.2
LSM11P83369 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.035e-6■■■■■ 28.2
LSM11P83369 GCOM1-206ENST00000471563 2275 ntTSL 1 (best)14.1□□□□□ -0.155e-6■■■■■ 28.2
LSM11P83369 GCOM1-212ENST00000496627 2500 ntTSL 213.87□□□□□ -0.195e-6■■■■■ 28.2
Retrieved 100 of 11,495 protein–RNA pairs in 51 ms