RNA–Protein interactions for RNA: ENST00000348462.5

RPL35-201, Transcript of ribosomal protein L35, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPL35, Length 455 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL35-201ENST00000348462 NISCHQ9Y2I1 1504 aa35.19■■■■□ 3.22
RPL35-201ENST00000348462 CCDC180Q9P1Z9 1646 aa31.25■■■□□ 2.59
RPL35-201ENST00000348462 ABCC9O60706 1549 aa30.31■■■□□ 2.44
RPL35-201ENST00000348462 ZCCHC6Q5VYS8 1495 aaKnown RBP29.4■■■□□ 2.3
RPL35-201ENST00000348462 NACADO15069 1562 aa29.29■■■□□ 2.28
RPL35-201ENST00000348462 RB1CC1Q8TDY2 1594 aa29.28■■■□□ 2.28
RPL35-201ENST00000348462 DCAF8L2P0C7V8 631 aa29.25■■■□□ 2.27
RPL35-201ENST00000348462 MYO15BQ96JP2 1530 aa29.19■■■□□ 2.26
RPL35-201ENST00000348462 DCAF1Q9Y4B6 1507 aa29.15■■■□□ 2.26
RPL35-201ENST00000348462 UNC13AQ9UPW8 1703 aa28.63■■■□□ 2.17
RPL35-201ENST00000348462 SCRIBQ14160 1630 aa28.53■■■□□ 2.16
RPL35-201ENST00000348462 BICRAQ9NZM4 1560 aa28.37■■■□□ 2.13
RPL35-201ENST00000348462 PABPN1Q86U42 306 aaKnown RBP eCLIP28.31■■■□□ 2.12
RPL35-201ENST00000348462 SHROOM4Q9ULL8 1493 aa28.13■■■□□ 2.09
RPL35-201ENST00000348462 EIF4G1Q04637 1599 aaKnown RBP27.61■■■□□ 2.01
RPL35-201ENST00000348462 DNAJC5BQ9UF47 199 aa27.51■■□□□ 1.99
RPL35-201ENST00000348462 CC2D2AQ9P2K1 1620 aa27.44■■□□□ 1.98
RPL35-201ENST00000348462 CECR2Q9BXF3 1484 aa27.37■■□□□ 1.97
RPL35-201ENST00000348462 SMARCA4P51532 1647 aa27.3■■□□□ 1.96
RPL35-201ENST00000348462 BAZ1AQ9NRL2 1556 aaPredicted RBP27.29■■□□□ 1.96
RPL35-201ENST00000348462 MROH2BQ7Z745 1585 aa27.13■■□□□ 1.93
RPL35-201ENST00000348462 SMARCA2P51531 1590 aa27.06■■□□□ 1.92
RPL35-201ENST00000348462 ATAD2BQ9ULI0 1458 aa27.06■■□□□ 1.92
RPL35-201ENST00000348462 PEG3Q9GZU2 1588 aa27.01■■□□□ 1.92
RPL35-201ENST00000348462 NCAPD3P42695 1498 aa26.99■■□□□ 1.91
RPL35-201ENST00000348462 HMGXB3Q12766 1538 aa26.94■■□□□ 1.9
RPL35-201ENST00000348462 RSF1Q96T23 1441 aaPredicted RBP26.88■■□□□ 1.89
RPL35-201ENST00000348462 BAZ1BQ9UIG0 1483 aaKnown RBP26.87■■□□□ 1.89
RPL35-201ENST00000348462 WIZO95785 1651 aa26.85■■□□□ 1.89
RPL35-201ENST00000348462 TOP2AP11388 1531 aaKnown RBP26.61■■□□□ 1.85
RPL35-201ENST00000348462 SUPT5HO00267 1087 aaKnown RBP26.33■■□□□ 1.81
RPL35-201ENST00000348462 LAMC3Q9Y6N6 1575 aa26.29■■□□□ 1.8
RPL35-201ENST00000348462 NESP48681 1621 aa26.28■■□□□ 1.8
RPL35-201ENST00000348462 CCDC88BA6NC98 1476 aa26.24■■□□□ 1.79
RPL35-201ENST00000348462 CADPSQ9ULU8 1353 aa26.21■■□□□ 1.79
RPL35-201ENST00000348462 ERCC6Q03468 1493 aa26.13■■□□□ 1.77
RPL35-201ENST00000348462 CFTRP13569 1480 aa26.11■■□□□ 1.77
RPL35-201ENST00000348462 PDS5BQ9NTI5 1447 aa26.07■■□□□ 1.76
RPL35-201ENST00000348462 KIF21AQ7Z4S6 1674 aa26.03■■□□□ 1.76
RPL35-201ENST00000348462 PRDM2Q13029 1718 aa26.02■■□□□ 1.76
RPL35-201ENST00000348462 FANCD2Q9BXW9 1451 aa25.94■■□□□ 1.74
RPL35-201ENST00000348462 CEP164Q9UPV0 1460 aa25.91■■□□□ 1.74
RPL35-201ENST00000348462 THOC2Q8NI27 1593 aaKnown RBP25.89■■□□□ 1.73
RPL35-201ENST00000348462 MRC2Q9UBG0 1479 aa25.82■■□□□ 1.72
RPL35-201ENST00000348462 CUX2O14529 1486 aa25.78■■□□□ 1.72
RPL35-201ENST00000348462 WDR62O43379 1518 aa25.73■■□□□ 1.71
RPL35-201ENST00000348462 URB2Q14146 1524 aaKnown RBP25.67■■□□□ 1.7
RPL35-201ENST00000348462 DNMBPQ6XZF7 1577 aa25.57■■□□□ 1.68
RPL35-201ENST00000348462 TOPBP1Q92547 1522 aa25.56■■□□□ 1.68
RPL35-201ENST00000348462 ABCC8Q09428 1581 aa25.56■■□□□ 1.68
RPL35-201ENST00000348462 CUX1P39880 1505 aa25.45■■□□□ 1.66
RPL35-201ENST00000348462 WRNQ14191 1432 aaPredicted RBP eCLIP25.36■■□□□ 1.65
RPL35-201ENST00000348462 POLA1P09884 1462 aaPredicted RBP25.35■■□□□ 1.65
RPL35-201ENST00000348462 IFT140Q96RY7 1462 aa25.34■■□□□ 1.65
RPL35-201ENST00000348462 FGD5Q6ZNL6 1462 aa25.34■■□□□ 1.65
RPL35-201ENST00000348462 BIVM-ERCC5R4GMW8 1640 aa25.32■■□□□ 1.64
RPL35-201ENST00000348462 SYNJ1O43426 1573 aa25.31■■□□□ 1.64
RPL35-201ENST00000348462 TOP2BQ02880 1626 aa25.3■■□□□ 1.64
RPL35-201ENST00000348462 TARBP1Q13395 1621 aaKnown RBP25.26■■□□□ 1.63
RPL35-201ENST00000348462 RAD54L2Q9Y4B4 1467 aa25.22■■□□□ 1.63
RPL35-201ENST00000348462 SOGA1O94964 1423 aa25.22■■□□□ 1.63
RPL35-201ENST00000348462 ZNF608Q9ULD9 1512 aaPredicted RBP25.19■■□□□ 1.62
RPL35-201ENST00000348462 EIF4G3O43432 1585 aaKnown RBP25.15■■□□□ 1.62
RPL35-201ENST00000348462 WDR97A6NE52 1622 aa25.15■■□□□ 1.62
RPL35-201ENST00000348462 ABCA10Q8WWZ4 1543 aa25.09■■□□□ 1.61
RPL35-201ENST00000348462 AQRO60306 1485 aaKnown RBP eCLIP25.06■■□□□ 1.61e-11■■■■■ 75.8
RPL35-201ENST00000348462 TDRD9Q8NDG6 1382 aaKnown RBP25.05■■□□□ 1.6
RPL35-201ENST00000348462 ABCA5Q8WWZ7 1642 aa25■■□□□ 1.59
RPL35-201ENST00000348462 GAPVD1Q14C86 1478 aa24.96■■□□□ 1.59
RPL35-201ENST00000348462 PBRM1Q86U86 1689 aa24.95■■□□□ 1.58
RPL35-201ENST00000348462 GRIN2BQ13224 1484 aa24.93■■□□□ 1.58
RPL35-201ENST00000348462 SNAPC4Q5SXM2 1469 aa24.89■■□□□ 1.57
RPL35-201ENST00000348462 TRIM41Q8WV44 630 aa24.87■■□□□ 1.57
RPL35-201ENST00000348462 MAGI1Q96QZ7 1491 aaPredicted RBP24.85■■□□□ 1.57
RPL35-201ENST00000348462 KIF27Q86VH2 1401 aa24.81■■□□□ 1.56
RPL35-201ENST00000348462 ERICH3Q5RHP9 1530 aa24.81■■□□□ 1.56
RPL35-201ENST00000348462 CHD1O14646 1710 aa24.79■■□□□ 1.56
RPL35-201ENST00000348462 ADAMTS12P58397 1594 aa24.76■■□□□ 1.55
RPL35-201ENST00000348462 SYNJ2O15056 1496 aa24.75■■□□□ 1.55
RPL35-201ENST00000348462 FBLN2P98095 1184 aa24.7■■□□□ 1.54
RPL35-201ENST00000348462 CHIC1Q5VXU3 224 aa24.7■■□□□ 1.54
RPL35-201ENST00000348462 FHAD1B1AJZ9 1412 aa24.69■■□□□ 1.54
RPL35-201ENST00000348462 OSCARQ8IYS5 282 aa24.67■■□□□ 1.54
RPL35-201ENST00000348462 CHMP7Q8WUX9 453 aaPredicted RBP24.67■■□□□ 1.54
RPL35-201ENST00000348462 CUL7Q14999 1698 aa24.66■■□□□ 1.54
RPL35-201ENST00000348462 IGF1RP08069 1367 aa24.64■■□□□ 1.53
RPL35-201ENST00000348462 RUSC2Q8N2Y8 1516 aa24.62■■□□□ 1.53
RPL35-201ENST00000348462 DNAJC5Q9H3Z4 198 aa24.62■■□□□ 1.53
RPL35-201ENST00000348462 GRIN2AQ12879 1464 aa24.62■■□□□ 1.53
RPL35-201ENST00000348462 CARMIL1Q5VZK9 1371 aa24.53■■□□□ 1.52
RPL35-201ENST00000348462 CLASP1Q7Z460 1538 aa24.51■■□□□ 1.51
RPL35-201ENST00000348462 EEA1Q15075 1411 aa24.51■■□□□ 1.51
RPL35-201ENST00000348462 NUP160Q12769 1436 aa24.49■■□□□ 1.51
RPL35-201ENST00000348462 CEP170Q5SW79 1584 aa24.49■■□□□ 1.51
RPL35-201ENST00000348462 RAPGEF2Q9Y4G8 1499 aa24.43■■□□□ 1.5
RPL35-201ENST00000348462 PRXQ9BXM0 1461 aa24.38■■□□□ 1.49
RPL35-201ENST00000348462 CSRNP3Q8WYN3 585 aa24.37■■□□□ 1.49
RPL35-201ENST00000348462 FAM9AQ8IZU1 332 aaPredicted RBP24.34■■□□□ 1.49
RPL35-201ENST00000348462 ARHGEF11O15085 1522 aa24.34■■□□□ 1.49
RPL35-201ENST00000348462 RIMBP3CA6NJZ7 1639 aa24.33■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms