RNA–Protein interactions for RNA: ENST00000471563.5

GCOM1-206, Transcript of GRINL1A complex locus 1, humanhuman

TSL 1 (best)

Gene GCOM1, Length 2,275 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCOM1-206ENST00000471563 NISCHQ9Y2I1 1504 aa33.46■■■□□ 2.95
GCOM1-206ENST00000471563 CCDC180Q9P1Z9 1646 aa28.91■■■□□ 2.22
GCOM1-206ENST00000471563 ZCCHC6Q5VYS8 1495 aaKnown RBP28.14■■■□□ 2.1
GCOM1-206ENST00000471563 DCAF8L2P0C7V8 631 aa27.85■■■□□ 2.05
GCOM1-206ENST00000471563 SHROOM4Q9ULL8 1493 aa27.75■■■□□ 2.03
GCOM1-206ENST00000471563 DCAF1Q9Y4B6 1507 aa27.52■■■□□ 2
GCOM1-206ENST00000471563 ABCC9O60706 1549 aa27.44■■□□□ 1.98
GCOM1-206ENST00000471563 MYO15BQ96JP2 1530 aa27.08■■□□□ 1.93
GCOM1-206ENST00000471563 NACADO15069 1562 aa26.93■■□□□ 1.9
GCOM1-206ENST00000471563 SCRIBQ14160 1630 aa26.86■■□□□ 1.89
GCOM1-206ENST00000471563 SUPT5HO00267 1087 aaKnown RBP26.79■■□□□ 1.88
GCOM1-206ENST00000471563 RB1CC1Q8TDY2 1594 aa26.66■■□□□ 1.86
GCOM1-206ENST00000471563 UNC13AQ9UPW8 1703 aa26.22■■□□□ 1.79
GCOM1-206ENST00000471563 CECR2Q9BXF3 1484 aa26.13■■□□□ 1.77
GCOM1-206ENST00000471563 RSF1Q96T23 1441 aaPredicted RBP26.12■■□□□ 1.77
GCOM1-206ENST00000471563 PABPN1Q86U42 306 aaKnown RBP eCLIP26.03■■□□□ 1.76
GCOM1-206ENST00000471563 BICRAQ9NZM4 1560 aa25.96■■□□□ 1.75
GCOM1-206ENST00000471563 MROH2BQ7Z745 1585 aa25.95■■□□□ 1.74
GCOM1-206ENST00000471563 BAZ1AQ9NRL2 1556 aaPredicted RBP25.77■■□□□ 1.72
GCOM1-206ENST00000471563 WIZO95785 1651 aa25.75■■□□□ 1.71
GCOM1-206ENST00000471563 CHIC1Q5VXU3 224 aa25.67■■□□□ 1.7
GCOM1-206ENST00000471563 SMARCA4P51532 1647 aa25.67■■□□□ 1.7
GCOM1-206ENST00000471563 TOP2AP11388 1531 aaKnown RBP25.37■■□□□ 1.65
GCOM1-206ENST00000471563 PEG3Q9GZU2 1588 aa25.27■■□□□ 1.64
GCOM1-206ENST00000471563 ATAD2BQ9ULI0 1458 aa25.23■■□□□ 1.63
GCOM1-206ENST00000471563 CCDC88BA6NC98 1476 aa25.23■■□□□ 1.63
GCOM1-206ENST00000471563 SMARCA2P51531 1590 aa25.2■■□□□ 1.62
GCOM1-206ENST00000471563 EIF4G1Q04637 1599 aaKnown RBP25.15■■□□□ 1.62
GCOM1-206ENST00000471563 BAZ1BQ9UIG0 1483 aaKnown RBP25.09■■□□□ 1.61
GCOM1-206ENST00000471563 TRIM41Q8WV44 630 aa25.06■■□□□ 1.6
GCOM1-206ENST00000471563 HRCP23327 699 aa24.92■■□□□ 1.58
GCOM1-206ENST00000471563 NCAPD3P42695 1498 aa24.92■■□□□ 1.58
GCOM1-206ENST00000471563 HMGXB3Q12766 1538 aa24.84■■□□□ 1.57
GCOM1-206ENST00000471563 ABCC8Q09428 1581 aa24.83■■□□□ 1.57
GCOM1-206ENST00000471563 LOC105371045A0A1W2PR82 267 aa24.83■■□□□ 1.57
GCOM1-206ENST00000471563 FAM9AQ8IZU1 332 aaPredicted RBP24.77■■□□□ 1.56
GCOM1-206ENST00000471563 CC2D2AQ9P2K1 1620 aa24.74■■□□□ 1.55
GCOM1-206ENST00000471563 PCGF6Q9BYE7 350 aa24.56■■□□□ 1.52
GCOM1-206ENST00000471563 WRNQ14191 1432 aaPredicted RBP eCLIP24.56■■□□□ 1.52
GCOM1-206ENST00000471563 EHMT2Q96KQ7 1210 aa24.54■■□□□ 1.52
GCOM1-206ENST00000471563 SYNJ1O43426 1573 aa24.47■■□□□ 1.51
GCOM1-206ENST00000471563 CFTRP13569 1480 aa24.45■■□□□ 1.51
GCOM1-206ENST00000471563 SOGA1O94964 1423 aa24.44■■□□□ 1.5
GCOM1-206ENST00000471563 RUSC2Q8N2Y8 1516 aa24.36■■□□□ 1.49
GCOM1-206ENST00000471563 CADPSQ9ULU8 1353 aa24.35■■□□□ 1.49
GCOM1-206ENST00000471563 DNAJC5BQ9UF47 199 aa24.35■■□□□ 1.49
GCOM1-206ENST00000471563 TOP2BQ02880 1626 aa24.26■■□□□ 1.47
GCOM1-206ENST00000471563 PPARGC1BQ86YN6 1023 aaKnown RBP24.24■■□□□ 1.47
GCOM1-206ENST00000471563 CUX1P39880 1505 aa24.22■■□□□ 1.47
GCOM1-206ENST00000471563 CSRNP3Q8WYN3 585 aa24.21■■□□□ 1.47
GCOM1-206ENST00000471563 PRDM2Q13029 1718 aa24.2■■□□□ 1.46
GCOM1-206ENST00000471563 BIVM-ERCC5R4GMW8 1640 aa24.2■■□□□ 1.46
GCOM1-206ENST00000471563 NESP48681 1621 aa24.19■■□□□ 1.46
GCOM1-206ENST00000471563 EEA1Q15075 1411 aa24.18■■□□□ 1.46
GCOM1-206ENST00000471563 FANCD2Q9BXW9 1451 aa24.1■■□□□ 1.45
GCOM1-206ENST00000471563 TRIM26Q12899 539 aaPredicted RBP24.08■■□□□ 1.45
GCOM1-206ENST00000471563 LAMC3Q9Y6N6 1575 aa23.98■■□□□ 1.43
GCOM1-206ENST00000471563 UBTFP17480 764 aaKnown RBP23.98■■□□□ 1.43
GCOM1-206ENST00000471563 GOLGA3Q08378 1498 aa23.96■■□□□ 1.43
GCOM1-206ENST00000471563 TNIKQ9UKE5 1360 aa23.94■■□□□ 1.42
GCOM1-206ENST00000471563 CEP164Q9UPV0 1460 aa23.93■■□□□ 1.42
GCOM1-206ENST00000471563 FGD5Q6ZNL6 1462 aa23.92■■□□□ 1.42
GCOM1-206ENST00000471563 KIF21BO75037 1637 aa23.9■■□□□ 1.42
GCOM1-206ENST00000471563 CEP162Q5TB80 1403 aa23.89■■□□□ 1.41
GCOM1-206ENST00000471563 RAPGEF2Q9Y4G8 1499 aa23.88■■□□□ 1.41
GCOM1-206ENST00000471563 KIF27Q86VH2 1401 aa23.87■■□□□ 1.41
GCOM1-206ENST00000471563 TOPBP1Q92547 1522 aa23.85■■□□□ 1.41
GCOM1-206ENST00000471563 DNMBPQ6XZF7 1577 aa23.84■■□□□ 1.41
GCOM1-206ENST00000471563 PDS5BQ9NTI5 1447 aa23.84■■□□□ 1.41
GCOM1-206ENST00000471563 CUX2O14529 1486 aa23.83■■□□□ 1.41
GCOM1-206ENST00000471563 URB2Q14146 1524 aaKnown RBP23.81■■□□□ 1.4
GCOM1-206ENST00000471563 PRXQ9BXM0 1461 aa23.79■■□□□ 1.4
GCOM1-206ENST00000471563 RAD54L2Q9Y4B4 1467 aa23.78■■□□□ 1.4
GCOM1-206ENST00000471563 KIF21AQ7Z4S6 1674 aa23.78■■□□□ 1.4
GCOM1-206ENST00000471563 POLA1P09884 1462 aaPredicted RBP23.78■■□□□ 1.4
GCOM1-206ENST00000471563 ZEB1P37275 1124 aaPredicted RBP23.77■■□□□ 1.4
GCOM1-206ENST00000471563 IGF1RP08069 1367 aa23.71■■□□□ 1.39
GCOM1-206ENST00000471563 RANGAP1P46060 587 aaPredicted RBP23.7■■□□□ 1.38
GCOM1-206ENST00000471563 ERICH3Q5RHP9 1530 aa23.68■■□□□ 1.38
GCOM1-206ENST00000471563 ABCA10Q8WWZ4 1543 aa23.65■■□□□ 1.38
GCOM1-206ENST00000471563 CLIP1P30622 1438 aa23.64■■□□□ 1.37
GCOM1-206ENST00000471563 CARMIL1Q5VZK9 1371 aa23.58■■□□□ 1.37
GCOM1-206ENST00000471563 TDRD9Q8NDG6 1382 aaKnown RBP23.55■■□□□ 1.36
GCOM1-206ENST00000471563 MRC2Q9UBG0 1479 aa23.53■■□□□ 1.36
GCOM1-206ENST00000471563 WDR97A6NE52 1622 aa23.51■■□□□ 1.35
GCOM1-206ENST00000471563 TTBK1Q5TCY1 1321 aaPredicted RBP23.51■■□□□ 1.35
GCOM1-206ENST00000471563 TARBP1Q13395 1621 aaKnown RBP23.45■■□□□ 1.34
GCOM1-206ENST00000471563 ERCC6Q03468 1493 aa23.43■■□□□ 1.34
GCOM1-206ENST00000471563 ABCA5Q8WWZ7 1642 aa23.43■■□□□ 1.34
GCOM1-206ENST00000471563 VPS8Q8N3P4 1428 aa23.43■■□□□ 1.34
GCOM1-206ENST00000471563 GAPVD1Q14C86 1478 aa23.42■■□□□ 1.34
GCOM1-206ENST00000471563 ARAP1Q96P48 1450 aa23.39■■□□□ 1.33
GCOM1-206ENST00000471563 WDR62O43379 1518 aa23.38■■□□□ 1.33
GCOM1-206ENST00000471563 CUL7Q14999 1698 aa23.35■■□□□ 1.33
GCOM1-206ENST00000471563 AQRO60306 1485 aaKnown RBP eCLIP23.35■■□□□ 1.33
GCOM1-206ENST00000471563 ARHGAP35Q9NRY4 1499 aa23.35■■□□□ 1.33
GCOM1-206ENST00000471563 ZNF608Q9ULD9 1512 aaPredicted RBP23.29■■□□□ 1.32
GCOM1-206ENST00000471563 THOC2Q8NI27 1593 aaKnown RBP23.28■■□□□ 1.32
GCOM1-206ENST00000471563 IFT140Q96RY7 1462 aa23.26■■□□□ 1.31
GCOM1-206ENST00000471563 PELP1Q8IZL8 1130 aaKnown RBP23.25■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms