RNA–Protein interactions for RNA: ENST00000431932.6

DENND4A-201, Transcript of DENN domain containing 4A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DENND4A, Length 5,875 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND4A-201ENST00000431932 NISCHQ9Y2I1 1504 aa10.69□□□□□ -0.7
DENND4A-201ENST00000431932 SHROOM4Q9ULL8 1493 aa9.32□□□□□ -0.92
DENND4A-201ENST00000431932 MYO15BQ96JP2 1530 aa9.31□□□□□ -0.92
DENND4A-201ENST00000431932 HRCP23327 699 aa9.26□□□□□ -0.93
DENND4A-201ENST00000431932 SUPT5HO00267 1087 aaKnown RBP9.16□□□□□ -0.94
DENND4A-201ENST00000431932 ZCCHC6Q5VYS8 1495 aaKnown RBP9.13□□□□□ -0.95
DENND4A-201ENST00000431932 PPARGC1BQ86YN6 1023 aaKnown RBP9.12□□□□□ -0.95
DENND4A-201ENST00000431932 PCGF6Q9BYE7 350 aa9.06□□□□□ -0.96
DENND4A-201ENST00000431932 CHIC1Q5VXU3 224 aa9.05□□□□□ -0.96
DENND4A-201ENST00000431932 CCDC180Q9P1Z9 1646 aa9.05□□□□□ -0.96
DENND4A-201ENST00000431932 DCAF1Q9Y4B6 1507 aa9.01□□□□□ -0.97
DENND4A-201ENST00000431932 LOC105371045A0A1W2PR82 267 aa8.85□□□□□ -0.99
DENND4A-201ENST00000431932 TRIM26Q12899 539 aaPredicted RBP8.8□□□□□ -1
DENND4A-201ENST00000431932 SCAF1Q9H7N4 1312 aaKnown RBP8.79□□□□□ -1
DENND4A-201ENST00000431932 PELP1Q8IZL8 1130 aaKnown RBP8.75□□□□□ -1.01
DENND4A-201ENST00000431932 ABCC9O60706 1549 aa8.73□□□□□ -1.01
DENND4A-201ENST00000431932 ZEB1P37275 1124 aaPredicted RBP8.66□□□□□ -1.02
DENND4A-201ENST00000431932 DCAF8L2P0C7V8 631 aa8.64□□□□□ -1.03
DENND4A-201ENST00000431932 RB1CC1Q8TDY2 1594 aa8.62□□□□□ -1.03
DENND4A-201ENST00000431932 SCRIBQ14160 1630 aa8.56□□□□□ -1.04
DENND4A-201ENST00000431932 RSF1Q96T23 1441 aaPredicted RBP8.55□□□□□ -1.04
DENND4A-201ENST00000431932 ACIN1Q9UKV3 1341 aaKnown RBP8.52□□□□□ -1.04
DENND4A-201ENST00000431932 NEUROD1Q13562 356 aa8.52□□□□□ -1.05
DENND4A-201ENST00000431932 TRIM41Q8WV44 630 aa8.48□□□□□ -1.05
DENND4A-201ENST00000431932 EIF4G1Q04637 1599 aaKnown RBP8.47□□□□□ -1.05
DENND4A-201ENST00000431932 FAM9AQ8IZU1 332 aaPredicted RBP8.46□□□□□ -1.05
DENND4A-201ENST00000431932 EHMT2Q96KQ7 1210 aa8.45□□□□□ -1.06
DENND4A-201ENST00000431932 GTF3C3Q9Y5Q9 886 aa8.44□□□□□ -1.06
DENND4A-201ENST00000431932 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.44□□□□□ -1.06
DENND4A-201ENST00000431932 WIZO95785 1651 aa8.42□□□□□ -1.06
DENND4A-201ENST00000431932 DIEXFQ68CQ4 756 aaKnown RBP8.38□□□□□ -1.07
DENND4A-201ENST00000431932 MYT1Q01538 1121 aa8.38□□□□□ -1.07
DENND4A-201ENST00000431932 CCER1Q8TC90 406 aaPredicted RBP8.37□□□□□ -1.07
DENND4A-201ENST00000431932 MROH2BQ7Z745 1585 aa8.37□□□□□ -1.07
DENND4A-201ENST00000431932 BAZ1AQ9NRL2 1556 aaPredicted RBP8.36□□□□□ -1.07
DENND4A-201ENST00000431932 NACADO15069 1562 aa8.34□□□□□ -1.07
DENND4A-201ENST00000431932 CECR2Q9BXF3 1484 aa8.34□□□□□ -1.07
DENND4A-201ENST00000431932 CENPBP07199 599 aaPredicted RBP8.33□□□□□ -1.08
DENND4A-201ENST00000431932 WRNQ14191 1432 aaPredicted RBP eCLIP8.31□□□□□ -1.088e-8■■■■■ 53.5
DENND4A-201ENST00000431932 ABCC8Q09428 1581 aa8.3□□□□□ -1.08
DENND4A-201ENST00000431932 CEP162Q5TB80 1403 aa8.25□□□□□ -1.09
DENND4A-201ENST00000431932 TTBK1Q5TCY1 1321 aaPredicted RBP8.25□□□□□ -1.09
DENND4A-201ENST00000431932 CCDC88BA6NC98 1476 aa8.25□□□□□ -1.09
DENND4A-201ENST00000431932 YTHDC1Q96MU7 727 aaKnown RBP8.25□□□□□ -1.09
DENND4A-201ENST00000431932 ZNF316A6NFI3 1004 aaPredicted RBP8.24□□□□□ -1.09
DENND4A-201ENST00000431932 TOP2AP11388 1531 aaKnown RBP8.22□□□□□ -1.09
DENND4A-201ENST00000431932 SMARCA2P51531 1590 aa8.21□□□□□ -1.1
DENND4A-201ENST00000431932 MIER1Q8N108 512 aa8.21□□□□□ -1.1
DENND4A-201ENST00000431932 SOGA1O94964 1423 aa8.2□□□□□ -1.1
DENND4A-201ENST00000431932 RUSC2Q8N2Y8 1516 aa8.18□□□□□ -1.1
DENND4A-201ENST00000431932 TNIKQ9UKE5 1360 aa8.18□□□□□ -1.1
DENND4A-201ENST00000431932 UNC13AQ9UPW8 1703 aa8.17□□□□□ -1.1
DENND4A-201ENST00000431932 SMARCA4P51532 1647 aa8.16□□□□□ -1.1
DENND4A-201ENST00000431932 KIF21BO75037 1637 aa8.13□□□□□ -1.11
DENND4A-201ENST00000431932 GOLGA3Q08378 1498 aa8.12□□□□□ -1.11
DENND4A-201ENST00000431932 SUPT16HQ9Y5B9 1047 aaKnown RBP8.09□□□□□ -1.11
DENND4A-201ENST00000431932 SYNJ1O43426 1573 aa8.08□□□□□ -1.12
DENND4A-201ENST00000431932 EEA1Q15075 1411 aa8.07□□□□□ -1.12
DENND4A-201ENST00000431932 HNRNPUL2Q1KMD3 747 aaKnown RBP8.05□□□□□ -1.12
DENND4A-201ENST00000431932 TSHZ2Q9NRE2 1034 aa8.03□□□□□ -1.12
DENND4A-201ENST00000431932 CSRNP3Q8WYN3 585 aa8.03□□□□□ -1.12
DENND4A-201ENST00000431932 CLIP1P30622 1438 aa8.02□□□□□ -1.13
DENND4A-201ENST00000431932 CEP164Q9UPV0 1460 aa8.02□□□□□ -1.13
DENND4A-201ENST00000431932 UBTFP17480 764 aaKnown RBP8.02□□□□□ -1.13
DENND4A-201ENST00000431932 VPS8Q8N3P4 1428 aa8.01□□□□□ -1.13
DENND4A-201ENST00000431932 BAZ1BQ9UIG0 1483 aaKnown RBP8□□□□□ -1.13
DENND4A-201ENST00000431932 DHX57Q6P158 1386 aaKnown RBP8□□□□□ -1.13
DENND4A-201ENST00000431932 ANP32EQ9BTT0 268 aa8□□□□□ -1.13
DENND4A-201ENST00000431932 CLSPNQ9HAW4 1339 aa7.99□□□□□ -1.13
DENND4A-201ENST00000431932 RAPGEF2Q9Y4G8 1499 aa7.99□□□□□ -1.13
DENND4A-201ENST00000431932 ARAP1Q96P48 1450 aa7.97□□□□□ -1.13
DENND4A-201ENST00000431932 PEG3Q9GZU2 1588 aa7.96□□□□□ -1.14
DENND4A-201ENST00000431932 BCL11AQ9H165 835 aa7.96□□□□□ -1.14
DENND4A-201ENST00000431932 BIVM-ERCC5R4GMW8 1640 aa7.95□□□□□ -1.14
DENND4A-201ENST00000431932 CUX2O14529 1486 aa7.94□□□□□ -1.14
DENND4A-201ENST00000431932 KCNH8Q96L42 1107 aa7.94□□□□□ -1.14
DENND4A-201ENST00000431932 MAPKBP1O60336 1514 aa7.93□□□□□ -1.14
DENND4A-201ENST00000431932 TOP2BQ02880 1626 aa7.93□□□□□ -1.14
DENND4A-201ENST00000431932 RRBP1Q9P2E9 1410 aaKnown RBP7.91□□□□□ -1.14
DENND4A-201ENST00000431932 BICRAQ9NZM4 1560 aa7.9□□□□□ -1.15
DENND4A-201ENST00000431932 ERICH3Q5RHP9 1530 aa7.89□□□□□ -1.15
DENND4A-201ENST00000431932 BCANQ96GW7 911 aa7.88□□□□□ -1.15
DENND4A-201ENST00000431932 KANK4Q5T7N3 995 aaPredicted RBP7.87□□□□□ -1.15
DENND4A-201ENST00000431932 WDR97A6NE52 1622 aa7.87□□□□□ -1.15
DENND4A-201ENST00000431932 RANGAP1P46060 587 aaPredicted RBP7.87□□□□□ -1.15
DENND4A-201ENST00000431932 APLP2Q06481 763 aa7.84□□□□□ -1.15
DENND4A-201ENST00000431932 FKBP8Q14318 412 aa7.83□□□□□ -1.16
DENND4A-201ENST00000431932 PRXQ9BXM0 1461 aa7.83□□□□□ -1.16
DENND4A-201ENST00000431932 CFAP43Q8NDM7 1665 aa7.82□□□□□ -1.16
DENND4A-201ENST00000431932 RBM19Q9Y4C8 960 aaKnown RBP7.82□□□□□ -1.16
DENND4A-201ENST00000431932 MSH5O43196 834 aa7.81□□□□□ -1.16
DENND4A-201ENST00000431932 RAB3GAP2Q9H2M9 1393 aa7.8□□□□□ -1.16
DENND4A-201ENST00000431932 ARHGAP35Q9NRY4 1499 aa7.8□□□□□ -1.16
DENND4A-201ENST00000431932 TIAM1Q13009 1591 aa7.8□□□□□ -1.16
DENND4A-201ENST00000431932 CUX1P39880 1505 aa7.79□□□□□ -1.16
DENND4A-201ENST00000431932 CCNB3Q8WWL7 1395 aa7.79□□□□□ -1.16
DENND4A-201ENST00000431932 PRDM2Q13029 1718 aa7.79□□□□□ -1.16
DENND4A-201ENST00000431932 ATAD2BQ9ULI0 1458 aa7.79□□□□□ -1.16
DENND4A-201ENST00000431932 PPP1R15AO75807 674 aaPredicted RBP7.78□□□□□ -1.16
DENND4A-201ENST00000431932 ITGAEP38570 1179 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms