RNA–Protein interactions for RNA: ENST00000482814.5

GCOM1-208, Transcript of GRINL1A complex locus 1, humanhuman

TSL 2

Gene GCOM1, Length 1,620 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCOM1-208ENST00000482814 NISCHQ9Y2I1 1504 aa43.05■■■■■ 4.48
GCOM1-208ENST00000482814 CCDC180Q9P1Z9 1646 aa37.93■■■■□ 3.66
GCOM1-208ENST00000482814 ABCC9O60706 1549 aa36.32■■■■□ 3.41
GCOM1-208ENST00000482814 ZCCHC6Q5VYS8 1495 aaKnown RBP36.02■■■■□ 3.36
GCOM1-208ENST00000482814 DCAF1Q9Y4B6 1507 aa35.73■■■■□ 3.31
GCOM1-208ENST00000482814 DCAF8L2P0C7V8 631 aa35.65■■■■□ 3.3
GCOM1-208ENST00000482814 MYO15BQ96JP2 1530 aa35.61■■■■□ 3.29
GCOM1-208ENST00000482814 NACADO15069 1562 aa35.52■■■■□ 3.28
GCOM1-208ENST00000482814 RB1CC1Q8TDY2 1594 aa35.35■■■■□ 3.25
GCOM1-208ENST00000482814 SCRIBQ14160 1630 aa34.6■■■■□ 3.13
GCOM1-208ENST00000482814 UNC13AQ9UPW8 1703 aa34.42■■■■□ 3.1
GCOM1-208ENST00000482814 SHROOM4Q9ULL8 1493 aa34.39■■■■□ 3.1
GCOM1-208ENST00000482814 BICRAQ9NZM4 1560 aa34.18■■■■□ 3.06
GCOM1-208ENST00000482814 PABPN1Q86U42 306 aaKnown RBP eCLIP34.08■■■■□ 3.05
GCOM1-208ENST00000482814 CECR2Q9BXF3 1484 aa33.4■■■□□ 2.94
GCOM1-208ENST00000482814 BAZ1AQ9NRL2 1556 aaPredicted RBP33.35■■■□□ 2.93
GCOM1-208ENST00000482814 EIF4G1Q04637 1599 aaKnown RBP33.25■■■□□ 2.91
GCOM1-208ENST00000482814 SMARCA4P51532 1647 aa33.21■■■□□ 2.91
GCOM1-208ENST00000482814 MROH2BQ7Z745 1585 aa33.15■■■□□ 2.9
GCOM1-208ENST00000482814 RSF1Q96T23 1441 aaPredicted RBP33.09■■■□□ 2.89
GCOM1-208ENST00000482814 PEG3Q9GZU2 1588 aa32.93■■■□□ 2.86
GCOM1-208ENST00000482814 SMARCA2P51531 1590 aa32.9■■■□□ 2.86
GCOM1-208ENST00000482814 CC2D2AQ9P2K1 1620 aa32.9■■■□□ 2.86
GCOM1-208ENST00000482814 ATAD2BQ9ULI0 1458 aa32.87■■■□□ 2.85
GCOM1-208ENST00000482814 SUPT5HO00267 1087 aaKnown RBP32.81■■■□□ 2.84
GCOM1-208ENST00000482814 WIZO95785 1651 aa32.8■■■□□ 2.84
GCOM1-208ENST00000482814 NCAPD3P42695 1498 aa32.77■■■□□ 2.84
GCOM1-208ENST00000482814 HMGXB3Q12766 1538 aa32.67■■■□□ 2.82
GCOM1-208ENST00000482814 BAZ1BQ9UIG0 1483 aaKnown RBP32.65■■■□□ 2.82
GCOM1-208ENST00000482814 DNAJC5BQ9UF47 199 aa32.61■■■□□ 2.81
GCOM1-208ENST00000482814 TOP2AP11388 1531 aaKnown RBP32.56■■■□□ 2.8
GCOM1-208ENST00000482814 CCDC88BA6NC98 1476 aa32.18■■■□□ 2.74
GCOM1-208ENST00000482814 CADPSQ9ULU8 1353 aa31.86■■■□□ 2.69
GCOM1-208ENST00000482814 CFTRP13569 1480 aa31.82■■■□□ 2.68
GCOM1-208ENST00000482814 LAMC3Q9Y6N6 1575 aa31.77■■■□□ 2.68
GCOM1-208ENST00000482814 NESP48681 1621 aa31.64■■■□□ 2.66
GCOM1-208ENST00000482814 PDS5BQ9NTI5 1447 aa31.57■■■□□ 2.64
GCOM1-208ENST00000482814 PRDM2Q13029 1718 aa31.57■■■□□ 2.64
GCOM1-208ENST00000482814 FANCD2Q9BXW9 1451 aa31.46■■■□□ 2.63
GCOM1-208ENST00000482814 CEP164Q9UPV0 1460 aa31.35■■■□□ 2.61
GCOM1-208ENST00000482814 ERCC6Q03468 1493 aa31.3■■■□□ 2.6
GCOM1-208ENST00000482814 KIF21AQ7Z4S6 1674 aa31.27■■■□□ 2.6
GCOM1-208ENST00000482814 WRNQ14191 1432 aaPredicted RBP eCLIP31.21■■■□□ 2.59
GCOM1-208ENST00000482814 ABCC8Q09428 1581 aa31.17■■■□□ 2.58
GCOM1-208ENST00000482814 MRC2Q9UBG0 1479 aa31.14■■■□□ 2.58
GCOM1-208ENST00000482814 CHIC1Q5VXU3 224 aa31.11■■■□□ 2.57
GCOM1-208ENST00000482814 DNMBPQ6XZF7 1577 aa31.07■■■□□ 2.56
GCOM1-208ENST00000482814 CUX1P39880 1505 aa31.05■■■□□ 2.56
GCOM1-208ENST00000482814 URB2Q14146 1524 aaKnown RBP31.05■■■□□ 2.56
GCOM1-208ENST00000482814 TOPBP1Q92547 1522 aa31.03■■■□□ 2.56
GCOM1-208ENST00000482814 TOP2BQ02880 1626 aa31.03■■■□□ 2.56
GCOM1-208ENST00000482814 TRIM41Q8WV44 630 aa31.02■■■□□ 2.56
GCOM1-208ENST00000482814 THOC2Q8NI27 1593 aaKnown RBP31.01■■■□□ 2.55
GCOM1-208ENST00000482814 SYNJ1O43426 1573 aa31■■■□□ 2.55
GCOM1-208ENST00000482814 WDR62O43379 1518 aa31■■■□□ 2.55
GCOM1-208ENST00000482814 BIVM-ERCC5R4GMW8 1640 aa31■■■□□ 2.55
GCOM1-208ENST00000482814 FGD5Q6ZNL6 1462 aa30.85■■■□□ 2.53
GCOM1-208ENST00000482814 POLA1P09884 1462 aaPredicted RBP30.81■■■□□ 2.52
GCOM1-208ENST00000482814 SOGA1O94964 1423 aa30.74■■■□□ 2.51
GCOM1-208ENST00000482814 CUX2O14529 1486 aa30.73■■■□□ 2.51
GCOM1-208ENST00000482814 IFT140Q96RY7 1462 aa30.69■■■□□ 2.5
GCOM1-208ENST00000482814 RAD54L2Q9Y4B4 1467 aa30.64■■■□□ 2.5
GCOM1-208ENST00000482814 ABCA10Q8WWZ4 1543 aa30.63■■■□□ 2.49
GCOM1-208ENST00000482814 TARBP1Q13395 1621 aaKnown RBP30.61■■■□□ 2.49
GCOM1-208ENST00000482814 KIF27Q86VH2 1401 aa30.52■■■□□ 2.48
GCOM1-208ENST00000482814 WDR97A6NE52 1622 aa30.52■■■□□ 2.48
GCOM1-208ENST00000482814 EEA1Q15075 1411 aa30.5■■■□□ 2.47
GCOM1-208ENST00000482814 TDRD9Q8NDG6 1382 aaKnown RBP30.43■■■□□ 2.46
GCOM1-208ENST00000482814 ZNF608Q9ULD9 1512 aaPredicted RBP30.39■■■□□ 2.46
GCOM1-208ENST00000482814 GAPVD1Q14C86 1478 aa30.39■■■□□ 2.46
GCOM1-208ENST00000482814 ABCA5Q8WWZ7 1642 aa30.38■■■□□ 2.45
GCOM1-208ENST00000482814 RUSC2Q8N2Y8 1516 aa30.35■■■□□ 2.45
GCOM1-208ENST00000482814 AQRO60306 1485 aaKnown RBP eCLIP30.35■■■□□ 2.45
GCOM1-208ENST00000482814 EIF4G3O43432 1585 aaKnown RBP30.32■■■□□ 2.44
GCOM1-208ENST00000482814 CSRNP3Q8WYN3 585 aa30.3■■■□□ 2.44
GCOM1-208ENST00000482814 GRIN2BQ13224 1484 aa30.3■■■□□ 2.44
GCOM1-208ENST00000482814 ERICH3Q5RHP9 1530 aa30.29■■■□□ 2.44
GCOM1-208ENST00000482814 IGF1RP08069 1367 aa30.27■■■□□ 2.44
GCOM1-208ENST00000482814 FAM9AQ8IZU1 332 aaPredicted RBP30.27■■■□□ 2.44
GCOM1-208ENST00000482814 PBRM1Q86U86 1689 aa30.2■■■□□ 2.42
GCOM1-208ENST00000482814 CUL7Q14999 1698 aa30.14■■■□□ 2.42
GCOM1-208ENST00000482814 MAGI1Q96QZ7 1491 aaPredicted RBP30.14■■■□□ 2.42
GCOM1-208ENST00000482814 CARMIL1Q5VZK9 1371 aa30.12■■■□□ 2.41
GCOM1-208ENST00000482814 PRXQ9BXM0 1461 aa30.11■■■□□ 2.41
GCOM1-208ENST00000482814 FHAD1B1AJZ9 1412 aa30.1■■■□□ 2.41
GCOM1-208ENST00000482814 SNAPC4Q5SXM2 1469 aa30.09■■■□□ 2.41
GCOM1-208ENST00000482814 ADAMTS12P58397 1594 aa30.04■■■□□ 2.4
GCOM1-208ENST00000482814 RAPGEF2Q9Y4G8 1499 aa30.03■■■□□ 2.4
GCOM1-208ENST00000482814 KIF21BO75037 1637 aa30.03■■■□□ 2.4
GCOM1-208ENST00000482814 SYNJ2O15056 1496 aa30■■■□□ 2.39
GCOM1-208ENST00000482814 CHMP7Q8WUX9 453 aaPredicted RBP29.96■■■□□ 2.39
GCOM1-208ENST00000482814 GOLGA3Q08378 1498 aa29.94■■■□□ 2.38
GCOM1-208ENST00000482814 GRIN2AQ12879 1464 aa29.88■■■□□ 2.37
GCOM1-208ENST00000482814 FBLN2P98095 1184 aa29.86■■■□□ 2.37
GCOM1-208ENST00000482814 UBTFP17480 764 aaKnown RBP29.8■■■□□ 2.36
GCOM1-208ENST00000482814 LOC105371045A0A1W2PR82 267 aa29.78■■■□□ 2.36
GCOM1-208ENST00000482814 EHMT2Q96KQ7 1210 aa29.75■■■□□ 2.35
GCOM1-208ENST00000482814 CHD1O14646 1710 aa29.75■■■□□ 2.35
GCOM1-208ENST00000482814 TNIKQ9UKE5 1360 aa29.74■■■□□ 2.35
GCOM1-208ENST00000482814 NUP160Q12769 1436 aa29.73■■■□□ 2.35
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms