RNA–Protein interactions for RNA: ENST00000463717.5

GCOM1-204, Transcript of GRINL1A complex locus 1, humanhuman

TSL 2

Gene GCOM1, Length 1,694 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCOM1-204ENST00000463717 NISCHQ9Y2I1 1504 aa44.79■■■■■ 4.76
GCOM1-204ENST00000463717 CCDC180Q9P1Z9 1646 aa39.01■■■■□ 3.83
GCOM1-204ENST00000463717 ZCCHC6Q5VYS8 1495 aaKnown RBP37.8■■■■□ 3.64
GCOM1-204ENST00000463717 DCAF1Q9Y4B6 1507 aa37.15■■■■□ 3.54
GCOM1-204ENST00000463717 SHROOM4Q9ULL8 1493 aa36.72■■■■□ 3.47
GCOM1-204ENST00000463717 MYO15BQ96JP2 1530 aa36.51■■■■□ 3.44
GCOM1-204ENST00000463717 DCAF8L2P0C7V8 631 aa36.48■■■■□ 3.43
GCOM1-204ENST00000463717 NACADO15069 1562 aa36.08■■■■□ 3.37
GCOM1-204ENST00000463717 ABCC9O60706 1549 aa36.06■■■■□ 3.36
GCOM1-204ENST00000463717 SCRIBQ14160 1630 aa35.77■■■■□ 3.32
GCOM1-204ENST00000463717 RB1CC1Q8TDY2 1594 aa35.64■■■■□ 3.3
GCOM1-204ENST00000463717 SUPT5HO00267 1087 aaKnown RBP35.57■■■■□ 3.28
GCOM1-204ENST00000463717 UNC13AQ9UPW8 1703 aa35.02■■■■□ 3.2
GCOM1-204ENST00000463717 RSF1Q96T23 1441 aaPredicted RBP34.88■■■■□ 3.17
GCOM1-204ENST00000463717 CECR2Q9BXF3 1484 aa34.64■■■■□ 3.14
GCOM1-204ENST00000463717 BAZ1AQ9NRL2 1556 aaPredicted RBP34.61■■■■□ 3.13
GCOM1-204ENST00000463717 MROH2BQ7Z745 1585 aa34.58■■■■□ 3.13
GCOM1-204ENST00000463717 BICRAQ9NZM4 1560 aa34.49■■■■□ 3.11
GCOM1-204ENST00000463717 CHIC1Q5VXU3 224 aa34.41■■■■□ 3.1
GCOM1-204ENST00000463717 SMARCA4P51532 1647 aa34.38■■■■□ 3.09
GCOM1-204ENST00000463717 WIZO95785 1651 aa34.38■■■■□ 3.09
GCOM1-204ENST00000463717 TOP2AP11388 1531 aaKnown RBP34.11■■■■□ 3.05
GCOM1-204ENST00000463717 PEG3Q9GZU2 1588 aa33.98■■■■□ 3.03
GCOM1-204ENST00000463717 PABPN1Q86U42 306 aaKnown RBP eCLIP33.97■■■■□ 3.03
GCOM1-204ENST00000463717 EIF4G1Q04637 1599 aaKnown RBP33.81■■■■□ 3
GCOM1-204ENST00000463717 SMARCA2P51531 1590 aa33.77■■■■□ 3
GCOM1-204ENST00000463717 CCDC88BA6NC98 1476 aa33.63■■■□□ 2.97
GCOM1-204ENST00000463717 ATAD2BQ9ULI0 1458 aa33.57■■■□□ 2.96
GCOM1-204ENST00000463717 TRIM41Q8WV44 630 aa33.48■■■□□ 2.95
GCOM1-204ENST00000463717 BAZ1BQ9UIG0 1483 aaKnown RBP33.46■■■□□ 2.95
GCOM1-204ENST00000463717 HMGXB3Q12766 1538 aa33.34■■■□□ 2.93
GCOM1-204ENST00000463717 NCAPD3P42695 1498 aa33.2■■■□□ 2.9
GCOM1-204ENST00000463717 ABCC8Q09428 1581 aa33.13■■■□□ 2.89
GCOM1-204ENST00000463717 LOC105371045A0A1W2PR82 267 aa33■■■□□ 2.87
GCOM1-204ENST00000463717 WRNQ14191 1432 aaPredicted RBP eCLIP32.86■■■□□ 2.85
GCOM1-204ENST00000463717 EEA1Q15075 1411 aa32.81■■■□□ 2.84
GCOM1-204ENST00000463717 PRDM2Q13029 1718 aa32.8■■■□□ 2.84
GCOM1-204ENST00000463717 FAM9AQ8IZU1 332 aaPredicted RBP32.77■■■□□ 2.84
GCOM1-204ENST00000463717 CC2D2AQ9P2K1 1620 aa32.76■■■□□ 2.83
GCOM1-204ENST00000463717 SYNJ1O43426 1573 aa32.76■■■□□ 2.83
GCOM1-204ENST00000463717 BIVM-ERCC5R4GMW8 1640 aa32.66■■■□□ 2.82
GCOM1-204ENST00000463717 TOP2BQ02880 1626 aa32.64■■■□□ 2.82
GCOM1-204ENST00000463717 CFTRP13569 1480 aa32.62■■■□□ 2.81
GCOM1-204ENST00000463717 SOGA1O94964 1423 aa32.54■■■□□ 2.8
GCOM1-204ENST00000463717 KIF21BO75037 1637 aa32.39■■■□□ 2.78
GCOM1-204ENST00000463717 RUSC2Q8N2Y8 1516 aa32.37■■■□□ 2.77
GCOM1-204ENST00000463717 CSRNP3Q8WYN3 585 aa32.34■■■□□ 2.77
GCOM1-204ENST00000463717 CADPSQ9ULU8 1353 aa32.33■■■□□ 2.77
GCOM1-204ENST00000463717 GOLGA3Q08378 1498 aa32.33■■■□□ 2.77
GCOM1-204ENST00000463717 CUX1P39880 1505 aa32.33■■■□□ 2.77
GCOM1-204ENST00000463717 CEP164Q9UPV0 1460 aa32.29■■■□□ 2.76
GCOM1-204ENST00000463717 TNIKQ9UKE5 1360 aa32.28■■■□□ 2.76
GCOM1-204ENST00000463717 EHMT2Q96KQ7 1210 aa32.21■■■□□ 2.75
GCOM1-204ENST00000463717 CEP162Q5TB80 1403 aa32.15■■■□□ 2.74
GCOM1-204ENST00000463717 PCGF6Q9BYE7 350 aa32.15■■■□□ 2.74
GCOM1-204ENST00000463717 TRIM26Q12899 539 aaPredicted RBP32.12■■■□□ 2.73
GCOM1-204ENST00000463717 LAMC3Q9Y6N6 1575 aa32.09■■■□□ 2.73
GCOM1-204ENST00000463717 ERICH3Q5RHP9 1530 aa32.06■■■□□ 2.72
GCOM1-204ENST00000463717 FANCD2Q9BXW9 1451 aa32.03■■■□□ 2.72
GCOM1-204ENST00000463717 KIF27Q86VH2 1401 aa32■■■□□ 2.71
GCOM1-204ENST00000463717 DNMBPQ6XZF7 1577 aa31.96■■■□□ 2.71
GCOM1-204ENST00000463717 UBTFP17480 764 aaKnown RBP31.95■■■□□ 2.7
GCOM1-204ENST00000463717 PRXQ9BXM0 1461 aa31.93■■■□□ 2.7
GCOM1-204ENST00000463717 RAPGEF2Q9Y4G8 1499 aa31.92■■■□□ 2.7
GCOM1-204ENST00000463717 FGD5Q6ZNL6 1462 aa31.88■■■□□ 2.69
GCOM1-204ENST00000463717 NESP48681 1621 aa31.83■■■□□ 2.69
GCOM1-204ENST00000463717 HRCP23327 699 aa31.8■■■□□ 2.68
GCOM1-204ENST00000463717 TOPBP1Q92547 1522 aa31.77■■■□□ 2.68
GCOM1-204ENST00000463717 CLIP1P30622 1438 aa31.77■■■□□ 2.68
GCOM1-204ENST00000463717 CUX2O14529 1486 aa31.75■■■□□ 2.67
GCOM1-204ENST00000463717 PDS5BQ9NTI5 1447 aa31.72■■■□□ 2.67
GCOM1-204ENST00000463717 ABCA10Q8WWZ4 1543 aa31.65■■■□□ 2.66
GCOM1-204ENST00000463717 KIF21AQ7Z4S6 1674 aa31.65■■■□□ 2.66
GCOM1-204ENST00000463717 POLA1P09884 1462 aaPredicted RBP31.64■■■□□ 2.66
GCOM1-204ENST00000463717 WDR97A6NE52 1622 aa31.64■■■□□ 2.66
GCOM1-204ENST00000463717 VPS8Q8N3P4 1428 aa31.62■■■□□ 2.65
GCOM1-204ENST00000463717 URB2Q14146 1524 aaKnown RBP31.59■■■□□ 2.65
GCOM1-204ENST00000463717 IGF1RP08069 1367 aa31.54■■■□□ 2.64
GCOM1-204ENST00000463717 CUL7Q14999 1698 aa31.54■■■□□ 2.64
GCOM1-204ENST00000463717 RAD54L2Q9Y4B4 1467 aa31.46■■■□□ 2.63
GCOM1-204ENST00000463717 CARMIL1Q5VZK9 1371 aa31.44■■■□□ 2.62
GCOM1-204ENST00000463717 ABCA5Q8WWZ7 1642 aa31.43■■■□□ 2.62
GCOM1-204ENST00000463717 ARAP1Q96P48 1450 aa31.41■■■□□ 2.62
GCOM1-204ENST00000463717 DNAJC5BQ9UF47 199 aa31.4■■■□□ 2.62
GCOM1-204ENST00000463717 PPARGC1BQ86YN6 1023 aaKnown RBP31.35■■■□□ 2.61
GCOM1-204ENST00000463717 MRC2Q9UBG0 1479 aa31.32■■■□□ 2.6
GCOM1-204ENST00000463717 TARBP1Q13395 1621 aaKnown RBP31.3■■■□□ 2.6
GCOM1-204ENST00000463717 CTTNBP2Q8WZ74 1663 aa31.3■■■□□ 2.6
GCOM1-204ENST00000463717 ARHGAP35Q9NRY4 1499 aa31.27■■■□□ 2.6
GCOM1-204ENST00000463717 ZEB1P37275 1124 aaPredicted RBP31.24■■■□□ 2.59
GCOM1-204ENST00000463717 APLP2Q06481 763 aa31.21■■■□□ 2.59
GCOM1-204ENST00000463717 GAPVD1Q14C86 1478 aa31.21■■■□□ 2.59
GCOM1-204ENST00000463717 PBRM1Q86U86 1689 aa31.17■■■□□ 2.58
GCOM1-204ENST00000463717 WDR62O43379 1518 aa31.17■■■□□ 2.58
GCOM1-204ENST00000463717 EFCAB5A4FU69 1503 aa31.16■■■□□ 2.58
GCOM1-204ENST00000463717 RANGAP1P46060 587 aaPredicted RBP31.14■■■□□ 2.58
GCOM1-204ENST00000463717 MAP3K1Q13233 1512 aa31.05■■■□□ 2.56
GCOM1-204ENST00000463717 TDRD9Q8NDG6 1382 aaKnown RBP31.04■■■□□ 2.56
GCOM1-204ENST00000463717 TTBK1Q5TCY1 1321 aaPredicted RBP31.04■■■□□ 2.56
GCOM1-204ENST00000463717 IFT140Q96RY7 1462 aa31.02■■■□□ 2.56
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms