RNA–Protein interactions for RNA: ENST00000610897.4

GNB1-209, Transcript of G protein subunit beta 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene GNB1, Length 3,145 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNB1-209ENST00000610897 NISCHQ9Y2I1 1504 aa36.53■■■■□ 3.44
GNB1-209ENST00000610897 HRCP23327 699 aa35.12■■■■□ 3.21
GNB1-209ENST00000610897 PPARGC1BQ86YN6 1023 aaKnown RBP34.79■■■■□ 3.16
GNB1-209ENST00000610897 PELP1Q8IZL8 1130 aaKnown RBP34.56■■■■□ 3.12
GNB1-209ENST00000610897 PCGF6Q9BYE7 350 aa34.42■■■■□ 3.1
GNB1-209ENST00000610897 SUPT5HO00267 1087 aaKnown RBP33.9■■■■□ 3.02
GNB1-209ENST00000610897 SHROOM4Q9ULL8 1493 aa33.77■■■■□ 3
GNB1-209ENST00000610897 SCAF1Q9H7N4 1312 aaKnown RBP33.73■■■□□ 2.99
GNB1-209ENST00000610897 MYO15BQ96JP2 1530 aa33.56■■■□□ 2.96
GNB1-209ENST00000610897 MYT1Q01538 1121 aa33.27■■■□□ 2.92
GNB1-209ENST00000610897 CHIC1Q5VXU3 224 aa33.21■■■□□ 2.91
GNB1-209ENST00000610897 LOC105371045A0A1W2PR82 267 aa32.83■■■□□ 2.85
GNB1-209ENST00000610897 TRIM26Q12899 539 aaPredicted RBP32.79■■■□□ 2.84
GNB1-209ENST00000610897 DCAF1Q9Y4B6 1507 aa32.64■■■□□ 2.82
GNB1-209ENST00000610897 NEUROD1Q13562 356 aa32.63■■■□□ 2.81
GNB1-209ENST00000610897 ACIN1Q9UKV3 1341 aaKnown RBP32.6■■■□□ 2.81
GNB1-209ENST00000610897 ZEB1P37275 1124 aaPredicted RBP32.57■■■□□ 2.81
GNB1-209ENST00000610897 GTF3C3Q9Y5Q9 886 aa32.55■■■□□ 2.8
GNB1-209ENST00000610897 CCDC180Q9P1Z9 1646 aa32.31■■■□□ 2.76
GNB1-209ENST00000610897 CENPBP07199 599 aaPredicted RBP32.09■■■□□ 2.73
GNB1-209ENST00000610897 DIEXFQ68CQ4 756 aaKnown RBP31.8■■■□□ 2.68
GNB1-209ENST00000610897 YTHDC1Q96MU7 727 aaKnown RBP31.73■■■□□ 2.67
GNB1-209ENST00000610897 EHMT2Q96KQ7 1210 aa31.7■■■□□ 2.67
GNB1-209ENST00000610897 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP31.69■■■□□ 2.66
GNB1-209ENST00000610897 CCER1Q8TC90 406 aaPredicted RBP31.58■■■□□ 2.65
GNB1-209ENST00000610897 BCL11AQ9H165 835 aa31.56■■■□□ 2.64
GNB1-209ENST00000610897 FAM9AQ8IZU1 332 aaPredicted RBP31.49■■■□□ 2.63
GNB1-209ENST00000610897 DCAF8L2P0C7V8 631 aa31.41■■■□□ 2.62
GNB1-209ENST00000610897 TTBK1Q5TCY1 1321 aaPredicted RBP31.24■■■□□ 2.59
GNB1-209ENST00000610897 ZCCHC6Q5VYS8 1495 aaKnown RBP31.12■■■□□ 2.57
GNB1-209ENST00000610897 ANP32EQ9BTT0 268 aa31.05■■■□□ 2.56
GNB1-209ENST00000610897 TRIM41Q8WV44 630 aa31.03■■■□□ 2.56
GNB1-209ENST00000610897 MIER1Q8N108 512 aa30.98■■■□□ 2.55
GNB1-209ENST00000610897 CSRNP3Q8WYN3 585 aa30.92■■■□□ 2.54
GNB1-209ENST00000610897 ZNF316A6NFI3 1004 aaPredicted RBP30.91■■■□□ 2.54
GNB1-209ENST00000610897 TSHZ2Q9NRE2 1034 aa30.74■■■□□ 2.51
GNB1-209ENST00000610897 SUPT16HQ9Y5B9 1047 aaKnown RBP30.69■■■□□ 2.5
GNB1-209ENST00000610897 PRKCSHP14314 528 aaPredicted RBP30.69■■■□□ 2.5
GNB1-209ENST00000610897 BCANQ96GW7 911 aa30.36■■■□□ 2.45
GNB1-209ENST00000610897 CLSPNQ9HAW4 1339 aa30.12■■■□□ 2.41
GNB1-209ENST00000610897 HNRNPUL2Q1KMD3 747 aaKnown RBP30.07■■■□□ 2.4
GNB1-209ENST00000610897 RBM19Q9Y4C8 960 aaKnown RBP29.98■■■□□ 2.39
GNB1-209ENST00000610897 FKBP8Q14318 412 aa29.9■■■□□ 2.38
GNB1-209ENST00000610897 RB1CC1Q8TDY2 1594 aa29.87■■■□□ 2.37
GNB1-209ENST00000610897 ITGAEP38570 1179 aa29.84■■■□□ 2.37
GNB1-209ENST00000610897 RSF1Q96T23 1441 aaPredicted RBP29.84■■■□□ 2.37
GNB1-209ENST00000610897 MSH5O43196 834 aa29.8■■■□□ 2.36
GNB1-209ENST00000610897 KCNH8Q96L42 1107 aa29.79■■■□□ 2.36
GNB1-209ENST00000610897 ERICH6Q7L0X2 663 aa29.71■■■□□ 2.35
GNB1-209ENST00000610897 ANO8Q9HCE9 1232 aaPredicted RBP29.68■■■□□ 2.34
GNB1-209ENST00000610897 ABCC9O60706 1549 aa29.67■■■□□ 2.34
GNB1-209ENST00000610897 CEP162Q5TB80 1403 aa29.6■■■□□ 2.33
GNB1-209ENST00000610897 WRNQ14191 1432 aaPredicted RBP eCLIP29.57■■■□□ 2.324e-6■□□□□ 10.4
GNB1-209ENST00000610897 NEFLP07196 543 aa29.54■■■□□ 2.32
GNB1-209ENST00000610897 UBTFP17480 764 aaKnown RBP29.5■■■□□ 2.31
GNB1-209ENST00000610897 DEKP35659 375 aaKnown RBP29.48■■■□□ 2.31
GNB1-209ENST00000610897 CCDC136Q96JN2 1154 aa29.33■■■□□ 2.29
GNB1-209ENST00000610897 TRIM52Q96A61 297 aa29.32■■■□□ 2.28
GNB1-209ENST00000610897 SALL2Q9Y467 1007 aaPredicted RBP29.31■■■□□ 2.28
GNB1-209ENST00000610897 APLP2Q06481 763 aa29.26■■■□□ 2.27
GNB1-209ENST00000610897 NBR1Q14596 966 aa29.22■■■□□ 2.27
GNB1-209ENST00000610897 IRX6P78412 446 aaPredicted RBP29.2■■■□□ 2.27
GNB1-209ENST00000610897 FANCIQ9NVI1 1328 aa29.19■■■□□ 2.26
GNB1-209ENST00000610897 TNIKQ9UKE5 1360 aa29.17■■■□□ 2.26
GNB1-209ENST00000610897 RANGAP1P46060 587 aaPredicted RBP29.14■■■□□ 2.26
GNB1-209ENST00000610897 CDK11AQ9UQ88 783 aaPredicted RBP29.14■■■□□ 2.26
GNB1-209ENST00000610897 DDX10Q13206 875 aaKnown RBP29.12■■■□□ 2.25
GNB1-209ENST00000610897 RTN4Q9NQC3 1192 aaKnown RBP29.09■■■□□ 2.25
GNB1-209ENST00000610897 SCRIBQ14160 1630 aa29.09■■■□□ 2.25
GNB1-209ENST00000610897 SOGA1O94964 1423 aa29.09■■■□□ 2.25
GNB1-209ENST00000610897 CCDC88BA6NC98 1476 aa29.06■■■□□ 2.24
GNB1-209ENST00000610897 ABCC8Q09428 1581 aa29.06■■■□□ 2.24
GNB1-209ENST00000610897 ZBTB4Q9P1Z0 1013 aaPredicted RBP29.06■■■□□ 2.24
GNB1-209ENST00000610897 DHX57Q6P158 1386 aaKnown RBP29.06■■■□□ 2.24
GNB1-209ENST00000610897 MYT1LQ9UL68 1186 aa29.04■■■□□ 2.24
GNB1-209ENST00000610897 IL27Q8NEV9 243 aa28.93■■■□□ 2.22
GNB1-209ENST00000610897 RUSC2Q8N2Y8 1516 aa28.91■■■□□ 2.22
GNB1-209ENST00000610897 HIRIP3Q9BW71 556 aaPredicted RBP28.9■■■□□ 2.22
GNB1-209ENST00000610897 CECR2Q9BXF3 1484 aa28.9■■■□□ 2.22
GNB1-209ENST00000610897 PAK3O75914 559 aaPredicted RBP28.84■■■□□ 2.21
GNB1-209ENST00000610897 NOP58Q9Y2X3 529 aaKnown RBP28.79■■■□□ 2.2
GNB1-209ENST00000610897 MROH2BQ7Z745 1585 aa28.79■■■□□ 2.2
GNB1-209ENST00000610897 ERICH6BQ5W0A0 696 aa28.74■■■□□ 2.19
GNB1-209ENST00000610897 WIZO95785 1651 aa28.73■■■□□ 2.19
GNB1-209ENST00000610897 GOLGA3Q08378 1498 aa28.71■■■□□ 2.19
GNB1-209ENST00000610897 ANP32CO43423 234 aa28.7■■■□□ 2.19
GNB1-209ENST00000610897 RTL5Q5HYW3 569 aaPredicted RBP28.7■■■□□ 2.18
GNB1-209ENST00000610897 CLIP1P30622 1438 aa28.69■■■□□ 2.18
GNB1-209ENST00000610897 HNRNPUQ00839 825 aaKnown RBP eCLIP28.67■■■□□ 2.18
GNB1-209ENST00000610897 B4GALNT3Q6L9W6 998 aa28.65■■■□□ 2.18
GNB1-209ENST00000610897 UBE2Q2Q8WVN8 375 aa28.65■■■□□ 2.18
GNB1-209ENST00000610897 VPS8Q8N3P4 1428 aa28.59■■■□□ 2.17
GNB1-209ENST00000610897 PPP1R15AO75807 674 aaPredicted RBP28.58■■■□□ 2.17
GNB1-209ENST00000610897 EIF5BO60841 1220 aaKnown RBP28.57■■■□□ 2.16
GNB1-209ENST00000610897 EIF4G1Q04637 1599 aaKnown RBP28.55■■■□□ 2.16
GNB1-209ENST00000610897 CCER2I3L3R5 266 aa28.54■■■□□ 2.16
GNB1-209ENST00000610897 SIN3AQ96ST3 1273 aa28.51■■■□□ 2.15
GNB1-209ENST00000610897 PPP4R2Q9NY27 417 aa28.5■■■□□ 2.15
GNB1-209ENST00000610897 NACADO15069 1562 aa28.49■■■□□ 2.15
GNB1-209ENST00000610897 KANK4Q5T7N3 995 aaPredicted RBP28.47■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms