RNA–Protein interactions for RNA: ENST00000511241.5

LINC01088-207, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 2

Gene LINC01088, Length 679 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-207ENST00000511241 AEBP2Q6ZN18 517 aaPredicted RBP32.25■■■□□ 2.75
LINC01088-207ENST00000511241 CHIC1Q5VXU3 224 aa31.96■■■□□ 2.71
LINC01088-207ENST00000511241 PHF23Q9BUL5 403 aaPredicted RBP28.09■■■□□ 2.09
LINC01088-207ENST00000511241 SENP3Q9H4L4 574 aaPredicted RBP27.4■■□□□ 1.98
LINC01088-207ENST00000511241 PLPPR3Q6T4P5 718 aa26.16■■□□□ 1.78
LINC01088-207ENST00000511241 FOXD1Q16676 465 aa25.31■■□□□ 1.64
LINC01088-207ENST00000511241 ADRA2BP18089 450 aa24.64■■□□□ 1.54
LINC01088-207ENST00000511241 PPP6R1Q9UPN7 881 aa24.64■■□□□ 1.54
LINC01088-207ENST00000511241 PIAS4Q8N2W9 510 aaPredicted RBP23.98■■□□□ 1.43
LINC01088-207ENST00000511241 MSH5O43196 834 aa23.27■■□□□ 1.32
LINC01088-207ENST00000511241 PPP4R3CPQ6ZMV5 832 aa23.06■■□□□ 1.28
LINC01088-207ENST00000511241 KCNA4P22459 653 aa22.93■■□□□ 1.26
LINC01088-207ENST00000511241 SCAF1Q9H7N4 1312 aaKnown RBP22.68■■□□□ 1.22
LINC01088-207ENST00000511241 NCBP3Q53F19 620 aaKnown RBP22.64■■□□□ 1.21
LINC01088-207ENST00000511241 CNKSR2Q8WXI2 1034 aa22.37■■□□□ 1.17
LINC01088-207ENST00000511241 NPM3O75607 178 aaKnown RBP22.22■■□□□ 1.15
LINC01088-207ENST00000511241 MAPK8IP2Q13387 824 aaPredicted RBP22.22■■□□□ 1.15
LINC01088-207ENST00000511241 SLC4A1APQ9BWU0 796 aaKnown RBP21.95■■□□□ 1.1
LINC01088-207ENST00000511241 DMRT2Q9Y5R5 561 aa21.91■■□□□ 1.1
LINC01088-207ENST00000511241 RNF216Q9NWF9 866 aaPredicted RBP21.83■■□□□ 1.09
LINC01088-207ENST00000511241 EHMT2Q96KQ7 1210 aa21.69■■□□□ 1.06
LINC01088-207ENST00000511241 HOXD11P31277 338 aaPredicted RBP21.64■■□□□ 1.05
LINC01088-207ENST00000511241 DNAJC5BQ9UF47 199 aa21.64■■□□□ 1.05
LINC01088-207ENST00000511241 CSRNP3Q8WYN3 585 aa21.32■■□□□ 1
LINC01088-207ENST00000511241 ZBTB22O15209 634 aa21.07■□□□□ 0.96
LINC01088-207ENST00000511241 FOXD4L1Q9NU39 408 aa21.05■□□□□ 0.96
LINC01088-207ENST00000511241 DCAF8L1A6NGE4 600 aa20.89■□□□□ 0.93
LINC01088-207ENST00000511241 SLC4A2P04920 1241 aa20.88■□□□□ 0.93
LINC01088-207ENST00000511241 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.6■□□□□ 0.89
LINC01088-207ENST00000511241 MYCNP04198 464 aaPredicted RBP20.58■□□□□ 0.89
LINC01088-207ENST00000511241 POTEDQ86YR6 584 aa20.42■□□□□ 0.86
LINC01088-207ENST00000511241 ATXN8OSP0DMR3 200 aa20.34■□□□□ 0.85
LINC01088-207ENST00000511241 U3KPZ7 1027 aaPredicted RBP20.28■□□□□ 0.84
LINC01088-207ENST00000511241 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.27■□□□□ 0.84
LINC01088-207ENST00000511241 HNRNPUL2Q1KMD3 747 aaKnown RBP20.27■□□□□ 0.84
LINC01088-207ENST00000511241 SAMD1Q6SPF0 538 aaPredicted RBP20.19■□□□□ 0.82
LINC01088-207ENST00000511241 APLP2Q06481 763 aa19.99■□□□□ 0.79
LINC01088-207ENST00000511241 RNF39Q9H2S5 420 aa19.94■□□□□ 0.78
LINC01088-207ENST00000511241 ATF5Q9Y2D1 282 aaPredicted RBP19.9■□□□□ 0.78
LINC01088-207ENST00000511241 C1QBPQ07021 282 aaKnown RBP19.77■□□□□ 0.76
LINC01088-207ENST00000511241 ZNF219Q9P2Y4 722 aaPredicted RBP19.62■□□□□ 0.73
LINC01088-207ENST00000511241 SPINK5Q9NQ38 1064 aaPredicted RBP19.56■□□□□ 0.72
LINC01088-207ENST00000511241 CAPN15O75808 1086 aa19.51■□□□□ 0.71
LINC01088-207ENST00000511241 TRHP20396 242 aaPredicted RBP19.5■□□□□ 0.71
LINC01088-207ENST00000511241 POLA2Q14181 598 aa19.29■□□□□ 0.68
LINC01088-207ENST00000511241 FKBP8Q14318 412 aa19.24■□□□□ 0.67
LINC01088-207ENST00000511241 FBLN2P98095 1184 aa19.15■□□□□ 0.66
LINC01088-207ENST00000511241 CACNB1Q02641 598 aaPredicted RBP19.13■□□□□ 0.65
LINC01088-207ENST00000511241 ABCB7O75027 752 aa19.12■□□□□ 0.65
LINC01088-207ENST00000511241 DSG3P32926 999 aa19.1■□□□□ 0.65
LINC01088-207ENST00000511241 ZBTB12Q9Y330 459 aaPredicted RBP19.09■□□□□ 0.65
LINC01088-207ENST00000511241 MKRN4PQ13434 485 aaPredicted RBP19.07■□□□□ 0.64
LINC01088-207ENST00000511241 SPDYE4A6NLX3 237 aa18.88■□□□□ 0.61
LINC01088-207ENST00000511241 PROM2Q8N271 834 aa18.65■□□□□ 0.58
LINC01088-207ENST00000511241 SPDYE2BA6NHP3 402 aa18.58■□□□□ 0.56
LINC01088-207ENST00000511241 SPDYE6P0CI01 402 aa18.58■□□□□ 0.56
LINC01088-207ENST00000511241 SPDYE2Q495Y8 402 aa18.58■□□□□ 0.56
LINC01088-207ENST00000511241 OSCARQ8IYS5 282 aa18.58■□□□□ 0.56
LINC01088-207ENST00000511241 FBXO3Q9UK99 471 aa18.56■□□□□ 0.56
LINC01088-207ENST00000511241 ZNF692Q9BU19 519 aaPredicted RBP18.53■□□□□ 0.56
LINC01088-207ENST00000511241 SSUH2Q9Y2M2 353 aa18.45■□□□□ 0.54
LINC01088-207ENST00000511241 AMER1Q5JTC6 1135 aaPredicted RBP18.3■□□□□ 0.52
LINC01088-207ENST00000511241 PABPN1Q86U42 306 aaKnown RBP eCLIP18.28■□□□□ 0.52
LINC01088-207ENST00000511241 RBM42Q9BTD8 480 aaKnown RBP18.26■□□□□ 0.51
LINC01088-207ENST00000511241 VASPP50552 380 aaPredicted RBP18.22■□□□□ 0.51
LINC01088-207ENST00000511241 STAG3Q9UJ98 1225 aa18.17■□□□□ 0.5
LINC01088-207ENST00000511241 RTN4Q9NQC3 1192 aaKnown RBP18.16■□□□□ 0.5
LINC01088-207ENST00000511241 AKT1S1Q96B36 256 aa18.11■□□□□ 0.49
LINC01088-207ENST00000511241 NISCHQ9Y2I1 1504 aa18.04■□□□□ 0.48
LINC01088-207ENST00000511241 IFNLR1Q8IU57 520 aaPredicted RBP17.98■□□□□ 0.47
LINC01088-207ENST00000511241 SPDYE1Q8NFV5 336 aaPredicted RBP17.94■□□□□ 0.46
LINC01088-207ENST00000511241 PLCD3Q8N3E9 789 aa17.89■□□□□ 0.45
LINC01088-207ENST00000511241 REM2Q8IYK8 340 aaPredicted RBP17.88■□□□□ 0.45
LINC01088-207ENST00000511241 MIER1Q8N108 512 aa17.87■□□□□ 0.45
LINC01088-207ENST00000511241 PLEKHG5O94827 1062 aa17.82■□□□□ 0.44
LINC01088-207ENST00000511241 KLHL34Q8N239 644 aa17.82■□□□□ 0.44
LINC01088-207ENST00000511241 CLEC11AQ9Y240 323 aa17.77■□□□□ 0.44
LINC01088-207ENST00000511241 SPOCK2Q92563 424 aa17.75■□□□□ 0.43
LINC01088-207ENST00000511241 ZBTB47Q9UFB7 747 aaPredicted RBP17.74■□□□□ 0.43
LINC01088-207ENST00000511241 PRR29P0C7W0 189 aa17.71■□□□□ 0.43
LINC01088-207ENST00000511241 PITPNM1O00562 1244 aa17.64■□□□□ 0.41
LINC01088-207ENST00000511241 CREBZFQ9NS37 354 aa17.54■□□□□ 0.4
LINC01088-207ENST00000511241 PKD2Q13563 968 aa17.53■□□□□ 0.4
LINC01088-207ENST00000511241 MNX1P50219 401 aaPredicted RBP17.41■□□□□ 0.38
LINC01088-207ENST00000511241 ECM2O94769 699 aaPredicted RBP17.37■□□□□ 0.37
LINC01088-207ENST00000511241 NUBP1P53384 320 aa17.37■□□□□ 0.37
LINC01088-207ENST00000511241 CIZ1Q9ULV3 898 aaPredicted RBP17.37■□□□□ 0.37
LINC01088-207ENST00000511241 NPM1P06748 294 aaKnown RBP eCLIP17.34■□□□□ 0.37
LINC01088-207ENST00000511241 GSE1Q14687 1217 aa17.34■□□□□ 0.37
LINC01088-207ENST00000511241 TRIM41Q8WV44 630 aa17.32■□□□□ 0.36
LINC01088-207ENST00000511241 FXR2P51116 673 aaKnown RBP eCLIP17.28■□□□□ 0.36
LINC01088-207ENST00000511241 CHRDL2Q6WN34 429 aa17.28■□□□□ 0.36
LINC01088-207ENST00000511241 CHADLQ6NUI6 762 aa17.26■□□□□ 0.35
LINC01088-207ENST00000511241 DCAF8Q5TAQ9 597 aa17.25■□□□□ 0.35
LINC01088-207ENST00000511241 DCAF8L2P0C7V8 631 aa17.24■□□□□ 0.35
LINC01088-207ENST00000511241 FAM212AQ96EL1 285 aa17.24■□□□□ 0.35
LINC01088-207ENST00000511241 PRKAR2AP13861 404 aaKnown RBP17.22■□□□□ 0.35
LINC01088-207ENST00000511241 FARP1Q9Y4F1 1045 aaPredicted RBP17.2■□□□□ 0.34
LINC01088-207ENST00000511241 RASEFQ8IZ41 740 aa17.17■□□□□ 0.34
LINC01088-207ENST00000511241 RGL2O15211 777 aa17.15■□□□□ 0.34
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