RNA–Protein interactions for RNA: ENST00000380569.6

GCOM1-202, Transcript of GRINL1A complex locus 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene GCOM1, Length 1,846 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCOM1-202ENST00000380569 NISCHQ9Y2I1 1504 aa41.6■■■■■ 4.25
GCOM1-202ENST00000380569 CCDC180Q9P1Z9 1646 aa35.86■■■■□ 3.33
GCOM1-202ENST00000380569 ZCCHC6Q5VYS8 1495 aaKnown RBP35.08■■■■□ 3.21
GCOM1-202ENST00000380569 SHROOM4Q9ULL8 1493 aa34.57■■■■□ 3.12
GCOM1-202ENST00000380569 DCAF1Q9Y4B6 1507 aa34.34■■■■□ 3.09
GCOM1-202ENST00000380569 ABCC9O60706 1549 aa34.29■■■■□ 3.08
GCOM1-202ENST00000380569 DCAF8L2P0C7V8 631 aa34.25■■■■□ 3.07
GCOM1-202ENST00000380569 MYO15BQ96JP2 1530 aa33.64■■■□□ 2.98
GCOM1-202ENST00000380569 SUPT5HO00267 1087 aaKnown RBP33.63■■■□□ 2.97
GCOM1-202ENST00000380569 NACADO15069 1562 aa33.32■■■□□ 2.92
GCOM1-202ENST00000380569 RB1CC1Q8TDY2 1594 aa33.21■■■□□ 2.91
GCOM1-202ENST00000380569 SCRIBQ14160 1630 aa33.18■■■□□ 2.9
GCOM1-202ENST00000380569 RSF1Q96T23 1441 aaPredicted RBP32.59■■■□□ 2.81
GCOM1-202ENST00000380569 CHIC1Q5VXU3 224 aa32.55■■■□□ 2.8
GCOM1-202ENST00000380569 UNC13AQ9UPW8 1703 aa32.4■■■□□ 2.78
GCOM1-202ENST00000380569 CECR2Q9BXF3 1484 aa32.33■■■□□ 2.77
GCOM1-202ENST00000380569 MROH2BQ7Z745 1585 aa32.21■■■□□ 2.75
GCOM1-202ENST00000380569 PABPN1Q86U42 306 aaKnown RBP eCLIP32.21■■■□□ 2.75
GCOM1-202ENST00000380569 BICRAQ9NZM4 1560 aa32.17■■■□□ 2.74
GCOM1-202ENST00000380569 BAZ1AQ9NRL2 1556 aaPredicted RBP32.03■■■□□ 2.72
GCOM1-202ENST00000380569 WIZO95785 1651 aa31.99■■■□□ 2.71
GCOM1-202ENST00000380569 SMARCA4P51532 1647 aa31.82■■■□□ 2.68
GCOM1-202ENST00000380569 TOP2AP11388 1531 aaKnown RBP31.61■■■□□ 2.65
GCOM1-202ENST00000380569 TRIM41Q8WV44 630 aa31.52■■■□□ 2.64
GCOM1-202ENST00000380569 EIF4G1Q04637 1599 aaKnown RBP31.4■■■□□ 2.62
GCOM1-202ENST00000380569 LOC105371045A0A1W2PR82 267 aa31.39■■■□□ 2.62
GCOM1-202ENST00000380569 SMARCA2P51531 1590 aa31.37■■■□□ 2.61
GCOM1-202ENST00000380569 CCDC88BA6NC98 1476 aa31.37■■■□□ 2.61
GCOM1-202ENST00000380569 PEG3Q9GZU2 1588 aa31.37■■■□□ 2.61
GCOM1-202ENST00000380569 ATAD2BQ9ULI0 1458 aa31.14■■■□□ 2.58
GCOM1-202ENST00000380569 FAM9AQ8IZU1 332 aaPredicted RBP31.02■■■□□ 2.56
GCOM1-202ENST00000380569 CC2D2AQ9P2K1 1620 aa30.99■■■□□ 2.55
GCOM1-202ENST00000380569 BAZ1BQ9UIG0 1483 aaKnown RBP30.99■■■□□ 2.55
GCOM1-202ENST00000380569 ABCC8Q09428 1581 aa30.95■■■□□ 2.55
GCOM1-202ENST00000380569 DNAJC5BQ9UF47 199 aa30.87■■■□□ 2.53
GCOM1-202ENST00000380569 NCAPD3P42695 1498 aa30.76■■■□□ 2.52
GCOM1-202ENST00000380569 HMGXB3Q12766 1538 aa30.71■■■□□ 2.51
GCOM1-202ENST00000380569 PCGF6Q9BYE7 350 aa30.69■■■□□ 2.5
GCOM1-202ENST00000380569 WRNQ14191 1432 aaPredicted RBP eCLIP30.64■■■□□ 2.49
GCOM1-202ENST00000380569 EHMT2Q96KQ7 1210 aa30.6■■■□□ 2.49
GCOM1-202ENST00000380569 SOGA1O94964 1423 aa30.54■■■□□ 2.48
GCOM1-202ENST00000380569 EEA1Q15075 1411 aa30.54■■■□□ 2.48
GCOM1-202ENST00000380569 SYNJ1O43426 1573 aa30.49■■■□□ 2.47
GCOM1-202ENST00000380569 TRIM26Q12899 539 aaPredicted RBP30.47■■■□□ 2.47
GCOM1-202ENST00000380569 RUSC2Q8N2Y8 1516 aa30.4■■■□□ 2.46
GCOM1-202ENST00000380569 HRCP23327 699 aa30.38■■■□□ 2.45
GCOM1-202ENST00000380569 CSRNP3Q8WYN3 585 aa30.38■■■□□ 2.45
GCOM1-202ENST00000380569 TOP2BQ02880 1626 aa30.27■■■□□ 2.44
GCOM1-202ENST00000380569 CFTRP13569 1480 aa30.25■■■□□ 2.43
GCOM1-202ENST00000380569 TNIKQ9UKE5 1360 aa30.25■■■□□ 2.43
GCOM1-202ENST00000380569 BIVM-ERCC5R4GMW8 1640 aa30.22■■■□□ 2.43
GCOM1-202ENST00000380569 GOLGA3Q08378 1498 aa30.18■■■□□ 2.42
GCOM1-202ENST00000380569 CEP162Q5TB80 1403 aa30.14■■■□□ 2.42
GCOM1-202ENST00000380569 KIF21BO75037 1637 aa30.11■■■□□ 2.41
GCOM1-202ENST00000380569 CEP164Q9UPV0 1460 aa30.1■■■□□ 2.41
GCOM1-202ENST00000380569 PRDM2Q13029 1718 aa30.09■■■□□ 2.41
GCOM1-202ENST00000380569 UBTFP17480 764 aaKnown RBP30.08■■■□□ 2.41
GCOM1-202ENST00000380569 CUX1P39880 1505 aa30.06■■■□□ 2.4
GCOM1-202ENST00000380569 CADPSQ9ULU8 1353 aa30.01■■■□□ 2.39
GCOM1-202ENST00000380569 PPARGC1BQ86YN6 1023 aaKnown RBP29.87■■■□□ 2.37
GCOM1-202ENST00000380569 NESP48681 1621 aa29.86■■■□□ 2.37
GCOM1-202ENST00000380569 RAPGEF2Q9Y4G8 1499 aa29.86■■■□□ 2.37
GCOM1-202ENST00000380569 LAMC3Q9Y6N6 1575 aa29.83■■■□□ 2.37
GCOM1-202ENST00000380569 KIF27Q86VH2 1401 aa29.79■■■□□ 2.36
GCOM1-202ENST00000380569 PRXQ9BXM0 1461 aa29.78■■■□□ 2.36
GCOM1-202ENST00000380569 ERICH3Q5RHP9 1530 aa29.77■■■□□ 2.36
GCOM1-202ENST00000380569 CLIP1P30622 1438 aa29.74■■■□□ 2.35
GCOM1-202ENST00000380569 FANCD2Q9BXW9 1451 aa29.68■■■□□ 2.34
GCOM1-202ENST00000380569 PDS5BQ9NTI5 1447 aa29.65■■■□□ 2.34
GCOM1-202ENST00000380569 FGD5Q6ZNL6 1462 aa29.61■■■□□ 2.33
GCOM1-202ENST00000380569 ZEB1P37275 1124 aaPredicted RBP29.59■■■□□ 2.33
GCOM1-202ENST00000380569 VPS8Q8N3P4 1428 aa29.57■■■□□ 2.32
GCOM1-202ENST00000380569 CUX2O14529 1486 aa29.57■■■□□ 2.32
GCOM1-202ENST00000380569 ERCC6Q03468 1493 aa29.52■■■□□ 2.32
GCOM1-202ENST00000380569 DNMBPQ6XZF7 1577 aa29.52■■■□□ 2.32
GCOM1-202ENST00000380569 IGF1RP08069 1367 aa29.49■■■□□ 2.31
GCOM1-202ENST00000380569 TTBK1Q5TCY1 1321 aaPredicted RBP29.47■■■□□ 2.31
GCOM1-202ENST00000380569 KIF21AQ7Z4S6 1674 aa29.46■■■□□ 2.31
GCOM1-202ENST00000380569 TOPBP1Q92547 1522 aa29.44■■■□□ 2.3
GCOM1-202ENST00000380569 RANGAP1P46060 587 aaPredicted RBP29.42■■■□□ 2.3
GCOM1-202ENST00000380569 POLA1P09884 1462 aaPredicted RBP29.36■■■□□ 2.29
GCOM1-202ENST00000380569 ARAP1Q96P48 1450 aa29.36■■■□□ 2.29
GCOM1-202ENST00000380569 CARMIL1Q5VZK9 1371 aa29.35■■■□□ 2.29
GCOM1-202ENST00000380569 ABCA10Q8WWZ4 1543 aa29.35■■■□□ 2.29
GCOM1-202ENST00000380569 APLP2Q06481 763 aa29.32■■■□□ 2.28
GCOM1-202ENST00000380569 RAD54L2Q9Y4B4 1467 aa29.31■■■□□ 2.28
GCOM1-202ENST00000380569 MRC2Q9UBG0 1479 aa29.29■■■□□ 2.28
GCOM1-202ENST00000380569 URB2Q14146 1524 aaKnown RBP29.29■■■□□ 2.28
GCOM1-202ENST00000380569 ARHGAP35Q9NRY4 1499 aa29.23■■■□□ 2.27
GCOM1-202ENST00000380569 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.21■■■□□ 2.27
GCOM1-202ENST00000380569 THOC2Q8NI27 1593 aaKnown RBP29.19■■■□□ 2.26
GCOM1-202ENST00000380569 WDR97A6NE52 1622 aa29.16■■■□□ 2.26
GCOM1-202ENST00000380569 CCER1Q8TC90 406 aaPredicted RBP29.15■■■□□ 2.26
GCOM1-202ENST00000380569 WDR62O43379 1518 aa29.15■■■□□ 2.26
GCOM1-202ENST00000380569 CUL7Q14999 1698 aa29.12■■■□□ 2.25
GCOM1-202ENST00000380569 ABCA5Q8WWZ7 1642 aa29.04■■■□□ 2.24
GCOM1-202ENST00000380569 KANK4Q5T7N3 995 aaPredicted RBP28.99■■■□□ 2.23
GCOM1-202ENST00000380569 TDRD9Q8NDG6 1382 aaKnown RBP28.97■■■□□ 2.23
GCOM1-202ENST00000380569 GAPVD1Q14C86 1478 aa28.96■■■□□ 2.23
GCOM1-202ENST00000380569 HNRNPUL2Q1KMD3 747 aaKnown RBP28.94■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 97.9 ms