RNA–Protein interactions for RNA: ENST00000393409.2

PLXNA1-201, Transcript of plexin A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PLXNA1, Length 9,066 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLXNA1-201ENST00000393409 DCAF8L2P0C7V8 631 aa21.26■□□□□ 0.99
PLXNA1-201ENST00000393409 PELP1Q8IZL8 1130 aaKnown RBP21.22■□□□□ 0.99
PLXNA1-201ENST00000393409 NISCHQ9Y2I1 1504 aa20.8■□□□□ 0.92
PLXNA1-201ENST00000393409 MYT1Q01538 1121 aa20.72■□□□□ 0.91
PLXNA1-201ENST00000393409 SUPT5HO00267 1087 aaKnown RBP20.69■□□□□ 0.9
PLXNA1-201ENST00000393409 CENPBP07199 599 aaPredicted RBP20.28■□□□□ 0.84
PLXNA1-201ENST00000393409 ZEB1P37275 1124 aaPredicted RBP20.22■□□□□ 0.83
PLXNA1-201ENST00000393409 SHROOM4Q9ULL8 1493 aa20.17■□□□□ 0.82
PLXNA1-201ENST00000393409 CCER1Q8TC90 406 aaPredicted RBP20.16■□□□□ 0.82
PLXNA1-201ENST00000393409 ERICH6Q7L0X2 663 aa20.08■□□□□ 0.8
PLXNA1-201ENST00000393409 APLP2Q06481 763 aa20.07■□□□□ 0.8
PLXNA1-201ENST00000393409 PCGF6Q9BYE7 350 aa20.04■□□□□ 0.8
PLXNA1-201ENST00000393409 FAM9AQ8IZU1 332 aaPredicted RBP19.95■□□□□ 0.78
PLXNA1-201ENST00000393409 EHMT2Q96KQ7 1210 aa19.82■□□□□ 0.76
PLXNA1-201ENST00000393409 NEFLP07196 543 aa19.65■□□□□ 0.74
PLXNA1-201ENST00000393409 TTBK1Q5TCY1 1321 aaPredicted RBP19.36■□□□□ 0.69
PLXNA1-201ENST00000393409 HRCP23327 699 aa19.35■□□□□ 0.69
PLXNA1-201ENST00000393409 YTHDC1Q96MU7 727 aaKnown RBP19.33■□□□□ 0.69
PLXNA1-201ENST00000393409 TRIM41Q8WV44 630 aa19.33■□□□□ 0.68
PLXNA1-201ENST00000393409 TRIM26Q12899 539 aaPredicted RBP19.31■□□□□ 0.68
PLXNA1-201ENST00000393409 DAXXQ9UER7 740 aaPredicted RBP19.13■□□□□ 0.65
PLXNA1-201ENST00000393409 UBTFP17480 764 aaKnown RBP19.05■□□□□ 0.64
PLXNA1-201ENST00000393409 RANGAP1P46060 587 aaPredicted RBP18.9■□□□□ 0.62
PLXNA1-201ENST00000393409 RTL5Q5HYW3 569 aaPredicted RBP18.89■□□□□ 0.61
PLXNA1-201ENST00000393409 ATP1B4Q9UN42 357 aaPredicted RBP18.82■□□□□ 0.6
PLXNA1-201ENST00000393409 DIEXFQ68CQ4 756 aaKnown RBP18.77■□□□□ 0.6
PLXNA1-201ENST00000393409 ZNF316A6NFI3 1004 aaPredicted RBP18.69■□□□□ 0.58
PLXNA1-201ENST00000393409 PPARGC1BQ86YN6 1023 aaKnown RBP18.64■□□□□ 0.58
PLXNA1-201ENST00000393409 CHIC1Q5VXU3 224 aa18.54■□□□□ 0.56
PLXNA1-201ENST00000393409 GTF3C3Q9Y5Q9 886 aa18.53■□□□□ 0.56
PLXNA1-201ENST00000393409 CLSPNQ9HAW4 1339 aa18.49■□□□□ 0.55
PLXNA1-201ENST00000393409 LOC105371045A0A1W2PR82 267 aa18.45■□□□□ 0.54
PLXNA1-201ENST00000393409 CDK11AQ9UQ88 783 aaPredicted RBP18.43■□□□□ 0.54
PLXNA1-201ENST00000393409 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.41■□□□□ 0.54
PLXNA1-201ENST00000393409 HNRNPUL2Q1KMD3 747 aaKnown RBP18.41■□□□□ 0.54
PLXNA1-201ENST00000393409 ITGAEP38570 1179 aa18.36■□□□□ 0.53
PLXNA1-201ENST00000393409 POLR3GLQ9BT43 218 aa18.36■□□□□ 0.53
PLXNA1-201ENST00000393409 ACIN1Q9UKV3 1341 aaKnown RBP18.34■□□□□ 0.53
PLXNA1-201ENST00000393409 MYT1LQ9UL68 1186 aa18.32■□□□□ 0.52
PLXNA1-201ENST00000393409 ANP32CO43423 234 aa18.25■□□□□ 0.51
PLXNA1-201ENST00000393409 ANP32AP39687 249 aaKnown RBP18.21■□□□□ 0.51
PLXNA1-201ENST00000393409 GLIPR1L2Q4G1C9 344 aa18.17■□□□□ 0.5
PLXNA1-201ENST00000393409 BCANQ96GW7 911 aa18.17■□□□□ 0.5
PLXNA1-201ENST00000393409 DCAF1Q9Y4B6 1507 aa18.09■□□□□ 0.49
PLXNA1-201ENST00000393409 CNGB1Q14028 1251 aaPredicted RBP18.05■□□□□ 0.48
PLXNA1-201ENST00000393409 FAM50AQ14320 339 aaKnown RBP17.99■□□□□ 0.47
PLXNA1-201ENST00000393409 ZBTB47Q9UFB7 747 aaPredicted RBP17.97■□□□□ 0.47
PLXNA1-201ENST00000393409 ANP32BQ92688 251 aaKnown RBP17.97■□□□□ 0.47
PLXNA1-201ENST00000393409 SLC4A1APQ9BWU0 796 aaKnown RBP17.94■□□□□ 0.46
PLXNA1-201ENST00000393409 NEUROD1Q13562 356 aa17.94■□□□□ 0.46
PLXNA1-201ENST00000393409 EIF5BO60841 1220 aaKnown RBP17.93■□□□□ 0.46
PLXNA1-201ENST00000393409 CANXP27824 592 aaKnown RBP17.87■□□□□ 0.45
PLXNA1-201ENST00000393409 CCDC180Q9P1Z9 1646 aa17.87■□□□□ 0.45
PLXNA1-201ENST00000393409 TRIM52Q96A61 297 aa17.87■□□□□ 0.45
PLXNA1-201ENST00000393409 FKBP8Q14318 412 aa17.79■□□□□ 0.44
PLXNA1-201ENST00000393409 UPF2Q9HAU5 1272 aaKnown RBP17.77■□□□□ 0.44
PLXNA1-201ENST00000393409 NPM2Q86SE8 214 aaKnown RBP17.74■□□□□ 0.43
PLXNA1-201ENST00000393409 SCAF1Q9H7N4 1312 aaKnown RBP17.73■□□□□ 0.43
PLXNA1-201ENST00000393409 HSP90AA1P07900 732 aaKnown RBP17.68■□□□□ 0.42
PLXNA1-201ENST00000393409 NEFMP07197 916 aa17.66■□□□□ 0.42
PLXNA1-201ENST00000393409 ZNF326Q5BKZ1 582 aaKnown RBP17.66■□□□□ 0.42
PLXNA1-201ENST00000393409 NBR1Q14596 966 aa17.62■□□□□ 0.41
PLXNA1-201ENST00000393409 TONSLQ96HA7 1378 aa17.61■□□□□ 0.41
PLXNA1-201ENST00000393409 HNRNPUQ00839 825 aaKnown RBP eCLIP17.6■□□□□ 0.41
PLXNA1-201ENST00000393409 CCDC136Q96JN2 1154 aa17.57■□□□□ 0.4
PLXNA1-201ENST00000393409 ANP32EQ9BTT0 268 aa17.56■□□□□ 0.4
PLXNA1-201ENST00000393409 DDRGK1Q96HY6 314 aa17.52■□□□□ 0.39
PLXNA1-201ENST00000393409 ABCC9O60706 1549 aa17.5■□□□□ 0.39
PLXNA1-201ENST00000393409 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.5■□□□□ 0.39
PLXNA1-201ENST00000393409 CSRNP3Q8WYN3 585 aa17.46■□□□□ 0.39
PLXNA1-201ENST00000393409 TNNT2P45379 298 aaPredicted RBP17.43■□□□□ 0.38
PLXNA1-201ENST00000393409 BECN1Q14457 450 aa17.43■□□□□ 0.38
PLXNA1-201ENST00000393409 DDX10Q13206 875 aaKnown RBP17.41■□□□□ 0.38
PLXNA1-201ENST00000393409 FAM9BQ8IZU0 186 aa17.4■□□□□ 0.38
PLXNA1-201ENST00000393409 TRIM44Q96DX7 344 aaPredicted RBP17.38■□□□□ 0.37
PLXNA1-201ENST00000393409 MIER1Q8N108 512 aa17.37■□□□□ 0.37
PLXNA1-201ENST00000393409 ERICH6BQ5W0A0 696 aa17.36■□□□□ 0.37
PLXNA1-201ENST00000393409 TMC1Q8TDI8 760 aa17.36■□□□□ 0.37
PLXNA1-201ENST00000393409 BCL11AQ9H165 835 aa17.36■□□□□ 0.37
PLXNA1-201ENST00000393409 FBLN2P98095 1184 aa17.35■□□□□ 0.37
PLXNA1-201ENST00000393409 ESF1Q9H501 851 aaKnown RBP17.35■□□□□ 0.37
PLXNA1-201ENST00000393409 SCRIBQ14160 1630 aa17.34■□□□□ 0.37
PLXNA1-201ENST00000393409 ZCCHC6Q5VYS8 1495 aaKnown RBP17.31■□□□□ 0.36
PLXNA1-201ENST00000393409 SLC24A1O60721 1099 aa17.3■□□□□ 0.36
PLXNA1-201ENST00000393409 PPM1GO15355 546 aaPredicted RBP17.3■□□□□ 0.36
PLXNA1-201ENST00000393409 MRS2Q9HD23 443 aa17.29■□□□□ 0.36
PLXNA1-201ENST00000393409 GOLGA6L22H0YM25 854 aa17.29■□□□□ 0.36
PLXNA1-201ENST00000393409 PABPN1Q86U42 306 aaKnown RBP eCLIP17.28■□□□□ 0.361e-8■■■■■ 32.2
PLXNA1-201ENST00000393409 ARXQ96QS3 562 aa17.26■□□□□ 0.35
PLXNA1-201ENST00000393409 WDR43Q15061 677 aaKnown RBP eCLIP17.24■□□□□ 0.35
PLXNA1-201ENST00000393409 MYH16Q9H6N6 1097 aa17.22■□□□□ 0.35
PLXNA1-201ENST00000393409 NOP58Q9Y2X3 529 aaKnown RBP17.2■□□□□ 0.34
PLXNA1-201ENST00000393409 NCLP19338 710 aaKnown RBP17.18■□□□□ 0.34
PLXNA1-201ENST00000393409 EEA1Q15075 1411 aa17.17■□□□□ 0.34
PLXNA1-201ENST00000393409 MYO15BQ96JP2 1530 aa17.16■□□□□ 0.34
PLXNA1-201ENST00000393409 CLIP1P30622 1438 aa17.16■□□□□ 0.34
PLXNA1-201ENST00000393409 NPM1P06748 294 aaKnown RBP eCLIP17.15■□□□□ 0.34
PLXNA1-201ENST00000393409 IRX6P78412 446 aaPredicted RBP17.13■□□□□ 0.33
PLXNA1-201ENST00000393409 EIF4G2P78344 907 aaKnown RBP eCLIP17.13■□□□□ 0.333e-7■■■■■ 30.4
PLXNA1-201ENST00000393409 NAP1L5Q96NT1 182 aaPredicted RBP17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 91.8 ms